RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
TRAPPC9-208ENST00000520857 PRR15LQ9BU68 103 aa8.2□□□□□ -1.1
TRAPPC9-208ENST00000520857 TENM4Q6N022 2769 aa8.2□□□□□ -1.1
TRAPPC9-208ENST00000520857 TNP2Q05952 138 aa8.18□□□□□ -1.1
TRAPPC9-208ENST00000520857 Q1T7F1 81 aa8.18□□□□□ -1.1
TRAPPC9-208ENST00000520857 NDUFS5O43920 106 aa8.17□□□□□ -1.1
TRAPPC9-208ENST00000520857 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
TRAPPC9-208ENST00000520857 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
TRAPPC9-208ENST00000520857 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
TRAPPC9-208ENST00000520857 A6NED7 52 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 KRTAP10-11P60412 298 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 TRRAPQ9Y4A5 3859 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 OTOGQ6ZRI0 2925 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 SPRR1AP35321 89 aa8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
TRAPPC9-208ENST00000520857 PLA2G2DQ9UNK4 145 aa8.14□□□□□ -1.11
TRAPPC9-208ENST00000520857 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
TRAPPC9-208ENST00000520857 UBE2DNLQ8IWF7 75 aa8.13□□□□□ -1.11
TRAPPC9-208ENST00000520857 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
TRAPPC9-208ENST00000520857 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
TRAPPC9-208ENST00000520857 LCE6AA0A183 80 aa8.11□□□□□ -1.11
TRAPPC9-208ENST00000520857 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
TRAPPC9-208ENST00000520857 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
TRAPPC9-208ENST00000520857 A8MU10 97 aa8.1□□□□□ -1.11
TRAPPC9-208ENST00000520857 PHF5AQ7RTV0 110 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-208ENST00000520857 KMT2BQ9UMN6 2715 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC9-208ENST00000520857 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
TRAPPC9-208ENST00000520857 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
TRAPPC9-208ENST00000520857 ANK3Q12955 4377 aaKnown RBP8.08□□□□□ -1.12
TRAPPC9-208ENST00000520857 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
TRAPPC9-208ENST00000520857 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
TRAPPC9-208ENST00000520857 A8MWP4 228 aa8.05□□□□□ -1.12
TRAPPC9-208ENST00000520857 Q5VV11 94 aa8.05□□□□□ -1.12
TRAPPC9-208ENST00000520857 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
TRAPPC9-208ENST00000520857 COA5Q86WW8 74 aa8.04□□□□□ -1.12
TRAPPC9-208ENST00000520857 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-208ENST00000520857 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-208ENST00000520857 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
TRAPPC9-208ENST00000520857 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-208ENST00000520857 IGHV6-1A0A0B4J1U7 121 aa8.01□□□□□ -1.13
TRAPPC9-208ENST00000520857 STAB2Q8WWQ8 2551 aa8.01□□□□□ -1.13
TRAPPC9-208ENST00000520857 H3BPC8 53 aa8.01□□□□□ -1.13
TRAPPC9-208ENST00000520857 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
TRAPPC9-208ENST00000520857 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC9-208ENST00000520857 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
TRAPPC9-208ENST00000520857 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
TRAPPC9-208ENST00000520857 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
TRAPPC9-208ENST00000520857 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
TRAPPC9-208ENST00000520857 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
TRAPPC9-208ENST00000520857 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
TRAPPC9-208ENST00000520857 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
TRAPPC9-208ENST00000520857 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
TRAPPC9-208ENST00000520857 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
TRAPPC9-208ENST00000520857 CD164Q04900 197 aa7.91□□□□□ -1.14
TRAPPC9-208ENST00000520857 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.15
TRAPPC9-208ENST00000520857 KTN1-AS1Q86SY8 53 aa7.9□□□□□ -1.15
TRAPPC9-208ENST00000520857 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
TRAPPC9-208ENST00000520857 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
TRAPPC9-208ENST00000520857 LCA10Q71F78 164 aa7.89□□□□□ -1.15
TRAPPC9-208ENST00000520857 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
TRAPPC9-208ENST00000520857 C8orf17Q9NRJ1 99 aa7.89□□□□□ -1.15
TRAPPC9-208ENST00000520857 MOBPQ13875 183 aa7.88□□□□□ -1.15
TRAPPC9-208ENST00000520857 TENM2Q9NT68 2774 aa7.87□□□□□ -1.15
TRAPPC9-208ENST00000520857 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
TRAPPC9-208ENST00000520857 Q75L30 129 aa7.87□□□□□ -1.15
TRAPPC9-208ENST00000520857 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
TRAPPC9-208ENST00000520857 SPRR1BP22528 89 aa7.83□□□□□ -1.16
TRAPPC9-208ENST00000520857 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
TRAPPC9-208ENST00000520857 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
TRAPPC9-208ENST00000520857 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
TRAPPC9-208ENST00000520857 MRPL34Q9BQ48 92 aaKnown RBP7.82□□□□□ -1.16
TRAPPC9-208ENST00000520857 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
TRAPPC9-208ENST00000520857 A0A1B0GVX0 72 aa7.81□□□□□ -1.16
TRAPPC9-208ENST00000520857 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
TRAPPC9-208ENST00000520857 K7EIL1 84 aa7.81□□□□□ -1.16
TRAPPC9-208ENST00000520857 SPINK7P58062 85 aa7.81□□□□□ -1.16
TRAPPC9-208ENST00000520857 PANO1I0J062 215 aa7.8□□□□□ -1.16
TRAPPC9-208ENST00000520857 HRES1P13985 223 aa7.8□□□□□ -1.16
TRAPPC9-208ENST00000520857 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
TRAPPC9-208ENST00000520857 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
TRAPPC9-208ENST00000520857 ZNF706Q9Y5V0 76 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC9-208ENST00000520857 A0A087X002 238 aa7.75□□□□□ -1.17
TRAPPC9-208ENST00000520857 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
TRAPPC9-208ENST00000520857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC9-208ENST00000520857 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
TRAPPC9-208ENST00000520857 MDFIQ99750 246 aa7.74□□□□□ -1.17
TRAPPC9-208ENST00000520857 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
TRAPPC9-208ENST00000520857 A6NN06 94 aa7.72□□□□□ -1.17
TRAPPC9-208ENST00000520857 Q96NJ1 140 aa7.71□□□□□ -1.17
TRAPPC9-208ENST00000520857 ACYP2P14621 99 aa7.71□□□□□ -1.18
TRAPPC9-208ENST00000520857 Q6ZR54 194 aa7.7□□□□□ -1.18
TRAPPC9-208ENST00000520857 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
TRAPPC9-208ENST00000520857 APLNQ9ULZ1 77 aa7.69□□□□□ -1.18
TRAPPC9-208ENST00000520857 A0A1B0GU69 56 aa7.68□□□□□ -1.18
TRAPPC9-208ENST00000520857 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
TRAPPC9-208ENST00000520857 Q5W150 140 aa7.66□□□□□ -1.18
TRAPPC9-208ENST00000520857 WWC2-AS2Q96NR7 200 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms