RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 TRBV7-6A0A0J9YX20 115 aa3.77□□□□□ -1.81
LSM1-202ENST00000520286 IGKV2-29A2NJV5 120 aaPredicted RBP3.77□□□□□ -1.81
LSM1-202ENST00000520286 NDUFA4O00483 81 aa3.77□□□□□ -1.81
LSM1-202ENST00000520286 PRB3Q04118 309 aaPredicted RBP3.77□□□□□ -1.81
LSM1-202ENST00000520286 CADP27708 2225 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 LYNX1G3V0Z9 82 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 JMJD7-PLA2G4BH0Y9G9 81 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 CRPP02741 224 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 LYNX1P0DP58 116 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 DEFB1P60022 68 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 BLCAPP62952 87 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
LSM1-202ENST00000520286 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 TRAV23DV6A0A075B6W5 121 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 P0C880 135 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 FAM74A4Q5TZK3 123 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 LINC00467Q9BRT7 94 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
LSM1-202ENST00000520286 F8WEM9 126 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 NCR3O14931 201 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 COX6A2Q02221 97 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 LAMTOR3Q9UHA4 124 aa3.74□□□□□ -1.81
LSM1-202ENST00000520286 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
LSM1-202ENST00000520286 A8MTW9 85 aa3.73□□□□□ -1.81
LSM1-202ENST00000520286 H3BUA1 57 aa3.73□□□□□ -1.81
LSM1-202ENST00000520286 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
LSM1-202ENST00000520286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
LSM1-202ENST00000520286 A0A1W2PNM2 257 aa3.72□□□□□ -1.81
LSM1-202ENST00000520286 G3V318 75 aa3.72□□□□□ -1.81
LSM1-202ENST00000520286 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
LSM1-202ENST00000520286 WFDC9Q8NEX5 89 aa3.72□□□□□ -1.81
LSM1-202ENST00000520286 UBL5Q9BZL1 73 aa3.72□□□□□ -1.81
LSM1-202ENST00000520286 TENM3Q9P273 2699 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 IGLV10-54A0A075B6I4 117 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 TRAV10A0A0B4J240 114 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 TRBV6-4A0A1B0GX49 114 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 MIFP14174 115 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 CCL18P55774 89 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 Q6ZQT0 140 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 C5orf56Q8N8D9 126 aa3.71□□□□□ -1.82
LSM1-202ENST00000520286 PLCE1Q9P212 2302 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 ESRGQ1W209 222 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 USMG5Q96IX5 58 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 RHPN1-AS1Q9BWJ2 59 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
LSM1-202ENST00000520286 IGKV4-1P06312 121 aa3.69□□□□□ -1.82
LSM1-202ENST00000520286 Q8N814 137 aa3.69□□□□□ -1.82
LSM1-202ENST00000520286 COX7B2Q8TF08 81 aa3.69□□□□□ -1.82
LSM1-202ENST00000520286 C3orf84H3BNL1 204 aa3.68□□□□□ -1.82
LSM1-202ENST00000520286 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
LSM1-202ENST00000520286 NREPQ16612 68 aa3.68□□□□□ -1.82
LSM1-202ENST00000520286 Q1T7F1 81 aa3.68□□□□□ -1.82
LSM1-202ENST00000520286 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
LSM1-202ENST00000520286 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 IGHV3-73A0A0B4J1V6 119 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 K7EIL1 84 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 PDE6GP18545 87 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
LSM1-202ENST00000520286 LCE6AA0A183 80 aa3.66□□□□□ -1.82
LSM1-202ENST00000520286 SPINK13Q1W4C9 94 aa3.66□□□□□ -1.82
LSM1-202ENST00000520286 DEFB112Q30KQ8 113 aa3.66□□□□□ -1.82
LSM1-202ENST00000520286 Q6ZTI0 123 aa3.66□□□□□ -1.82
LSM1-202ENST00000520286 DYNLRB2Q8TF09 96 aa3.66□□□□□ -1.82
LSM1-202ENST00000520286 TRBV10-1A0A0K0K1A3 114 aa3.65□□□□□ -1.83
LSM1-202ENST00000520286 M0R2N4 97 aa3.65□□□□□ -1.83
LSM1-202ENST00000520286 UBE2L6O14933 153 aa3.65□□□□□ -1.83
LSM1-202ENST00000520286 FUSP35637 526 aaKnown RBP eCLIP3.65□□□□□ -1.83
LSM1-202ENST00000520286 BRD3OSQ6XYD6 125 aa3.65□□□□□ -1.83
LSM1-202ENST00000520286 LINC00158P58513 81 aa3.64□□□□□ -1.83
LSM1-202ENST00000520286 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
LSM1-202ENST00000520286 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
LSM1-202ENST00000520286 IGKV3-7A0A075B6H7 116 aa3.63□□□□□ -1.83
LSM1-202ENST00000520286 DEFB114Q30KQ6 69 aa3.63□□□□□ -1.83
LSM1-202ENST00000520286 C11orf68Q9H3H3 251 aaKnown RBP3.63□□□□□ -1.83
LSM1-202ENST00000520286 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
LSM1-202ENST00000520286 RYR2Q92736 4967 aa3.62□□□□□ -1.83
LSM1-202ENST00000520286 HAMPP81172 84 aa3.62□□□□□ -1.83
LSM1-202ENST00000520286 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
LSM1-202ENST00000520286 CYP4F30PQ9H0H9 118 aa3.62□□□□□ -1.83
LSM1-202ENST00000520286 Q8IZM0 81 aa3.61□□□□□ -1.83
LSM1-202ENST00000520286 CMYA5Q8N3K9 4069 aa3.61□□□□□ -1.83
LSM1-202ENST00000520286 COX17Q14061 63 aa3.6□□□□□ -1.83
LSM1-202ENST00000520286 COL7A1Q02388 2944 aa3.59□□□□□ -1.83
LSM1-202ENST00000520286 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.83
LSM1-202ENST00000520286 ZNF73O43830 326 aaPredicted RBP3.59□□□□□ -1.83
LSM1-202ENST00000520286 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
LSM1-202ENST00000520286 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
LSM1-202ENST00000520286 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
LSM1-202ENST00000520286 COX7BP24311 80 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms