RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ORMDL1Q9P0S3 153 aa10.52□□□□□ -0.73
SDC2-205ENST00000520233 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
SDC2-205ENST00000520233 H3BQ85 93 aa10.51□□□□□ -0.73
SDC2-205ENST00000520233 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
SDC2-205ENST00000520233 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
SDC2-205ENST00000520233 SPCS1Q9Y6A9 102 aa10.5□□□□□ -0.73
SDC2-205ENST00000520233 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
SDC2-205ENST00000520233 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
SDC2-205ENST00000520233 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
SDC2-205ENST00000520233 FLG2Q5D862 2391 aaPredicted RBP10.47□□□□□ -0.73
SDC2-205ENST00000520233 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
SDC2-205ENST00000520233 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
SDC2-205ENST00000520233 MOBPQ13875 183 aa10.46□□□□□ -0.73
SDC2-205ENST00000520233 C9orf153Q5TBE3 101 aa10.45□□□□□ -0.74
SDC2-205ENST00000520233 SSBP3-AS1Q7Z2R9 100 aa10.45□□□□□ -0.74
SDC2-205ENST00000520233 F8WEM9 126 aa10.44□□□□□ -0.74
SDC2-205ENST00000520233 H3BMG7 143 aa10.44□□□□□ -0.74
SDC2-205ENST00000520233 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
SDC2-205ENST00000520233 NDUFV3P56181 108 aaKnown RBP10.44□□□□□ -0.74
SDC2-205ENST00000520233 Q8NBF4 154 aa10.44□□□□□ -0.74
SDC2-205ENST00000520233 PCLOQ9Y6V0 5065 aa10.43□□□□□ -0.74
SDC2-205ENST00000520233 C9JAW5 83 aa10.43□□□□□ -0.74
SDC2-205ENST00000520233 K7EP34 96 aa10.43□□□□□ -0.74
SDC2-205ENST00000520233 UBE2V1Q13404 147 aa10.42□□□□□ -0.74
SDC2-205ENST00000520233 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
SDC2-205ENST00000520233 J3QL48 77 aa10.41□□□□□ -0.74
SDC2-205ENST00000520233 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
SDC2-205ENST00000520233 FAT3Q8TDW7 4589 aa10.38□□□□□ -0.75
SDC2-205ENST00000520233 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
SDC2-205ENST00000520233 H3BT86 120 aa10.37□□□□□ -0.75
SDC2-205ENST00000520233 ANKRD29Q8N6D5 301 aa10.37□□□□□ -0.75
SDC2-205ENST00000520233 Q6JHZ5 121 aa10.36□□□□□ -0.75
SDC2-205ENST00000520233 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
SDC2-205ENST00000520233 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
SDC2-205ENST00000520233 MTURNQ8N3F0 131 aa10.34□□□□□ -0.75
SDC2-205ENST00000520233 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
SDC2-205ENST00000520233 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
SDC2-205ENST00000520233 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
SDC2-205ENST00000520233 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
SDC2-205ENST00000520233 A0A0G2JQZ4 141 aa10.3□□□□□ -0.76
SDC2-205ENST00000520233 A0A1B0GV90 55 aa10.3□□□□□ -0.76
SDC2-205ENST00000520233 JMJD7-PLA2G4BH0Y9G9 81 aa10.3□□□□□ -0.76
SDC2-205ENST00000520233 RBM3P98179 157 aaKnown RBP10.3□□□□□ -0.76
SDC2-205ENST00000520233 CD164Q04900 197 aa10.3□□□□□ -0.76
SDC2-205ENST00000520233 A0A1B0GV72 72 aa10.29□□□□□ -0.76
SDC2-205ENST00000520233 SMCPP49901 116 aaPredicted RBP10.29□□□□□ -0.76
SDC2-205ENST00000520233 SPINK1P00995 79 aa10.28□□□□□ -0.76
SDC2-205ENST00000520233 F8W1H4 67 aa10.27□□□□□ -0.77
SDC2-205ENST00000520233 OBSCN-AS1Q96MR7 158 aa10.27□□□□□ -0.77
SDC2-205ENST00000520233 TNXBP22105 4242 aa10.26□□□□□ -0.77
SDC2-205ENST00000520233 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
SDC2-205ENST00000520233 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
SDC2-205ENST00000520233 RPS29P62273 56 aaKnown RBP10.25□□□□□ -0.77
SDC2-205ENST00000520233 DSCR8Q96T75 97 aa10.25□□□□□ -0.77
SDC2-205ENST00000520233 Q6Q795 121 aa10.24□□□□□ -0.77
SDC2-205ENST00000520233 TEN1Q86WV5 123 aa10.22□□□□□ -0.77
SDC2-205ENST00000520233 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
SDC2-205ENST00000520233 LOC110117498A0A087WWA1 95 aa10.2□□□□□ -0.78
SDC2-205ENST00000520233 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
SDC2-205ENST00000520233 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
SDC2-205ENST00000520233 PDE6GP18545 87 aa10.2□□□□□ -0.78
SDC2-205ENST00000520233 C14orf132Q9NPU4 83 aa10.2□□□□□ -0.78
SDC2-205ENST00000520233 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
SDC2-205ENST00000520233 CCKP06307 115 aa10.18□□□□□ -0.78
SDC2-205ENST00000520233 Q5XG85 94 aa10.18□□□□□ -0.78
SDC2-205ENST00000520233 Q6ZQT0 140 aa10.18□□□□□ -0.78
SDC2-205ENST00000520233 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.78
SDC2-205ENST00000520233 VPS25Q9BRG1 176 aa10.15□□□□□ -0.78
SDC2-205ENST00000520233 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
SDC2-205ENST00000520233 A0A087WSZ3 146 aa10.12□□□□□ -0.79
SDC2-205ENST00000520233 SS18L2Q9UHA2 77 aa10.11□□□□□ -0.79
SDC2-205ENST00000520233 A0A1B0GW54 56 aa10.1□□□□□ -0.79
SDC2-205ENST00000520233 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
SDC2-205ENST00000520233 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
SDC2-205ENST00000520233 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
SDC2-205ENST00000520233 FP248Q71RG6 208 aaPredicted RBP10.03□□□□□ -0.8
SDC2-205ENST00000520233 PRR4Q16378 134 aa10.01□□□□□ -0.81
SDC2-205ENST00000520233 HERC1Q15751 4861 aa9.99□□□□□ -0.81
SDC2-205ENST00000520233 Q96NJ1 140 aa9.98□□□□□ -0.81
SDC2-205ENST00000520233 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
SDC2-205ENST00000520233 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
SDC2-205ENST00000520233 NREPQ16612 68 aa9.94□□□□□ -0.82
SDC2-205ENST00000520233 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
SDC2-205ENST00000520233 DEFB116Q30KQ4 102 aa9.9□□□□□ -0.82
SDC2-205ENST00000520233 LINC00846Q9NV44 126 aa9.9□□□□□ -0.82
SDC2-205ENST00000520233 J3KT08 172 aa9.88□□□□□ -0.83
SDC2-205ENST00000520233 ACYP1P07311 99 aa9.88□□□□□ -0.83
SDC2-205ENST00000520233 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
SDC2-205ENST00000520233 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
SDC2-205ENST00000520233 Q6ZVQ6 151 aa9.87□□□□□ -0.83
SDC2-205ENST00000520233 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
SDC2-205ENST00000520233 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
SDC2-205ENST00000520233 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
SDC2-205ENST00000520233 J3QR89 54 aa9.82□□□□□ -0.84
SDC2-205ENST00000520233 BPY2O14599 106 aa9.8□□□□□ -0.84
SDC2-205ENST00000520233 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
SDC2-205ENST00000520233 A8MWP4 228 aa9.78□□□□□ -0.84
SDC2-205ENST00000520233 NDUFB1O75438 58 aa9.78□□□□□ -0.84
SDC2-205ENST00000520233 A0A1B0GVX0 72 aa9.77□□□□□ -0.85
SDC2-205ENST00000520233 DSCR10P59022 87 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms