RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 Q6ZVQ6 151 aa2.83□□□□□ -1.96
PABPC1-212ENST00000519622 A0A096LNI7 61 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 LRCOL1A6NCL2 159 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 CNBPP62633 177 aaKnown RBP2.82□□□□□ -1.96
PABPC1-212ENST00000519622 ATP5EP2Q5VTU8 51 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 Q6ZRX8 168 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 DNAH5Q8TE73 4624 aa2.82□□□□□ -1.96
PABPC1-212ENST00000519622 FBN3Q75N90 2809 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 IGLV9-49A0A0B4J1Y8 123 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 A0A1W2PNM2 257 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 A0A1W2PNN7 141 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 PANO1I0J062 215 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 COX7CP15954 63 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 RBM3P98179 157 aaKnown RBP2.81□□□□□ -1.96
PABPC1-212ENST00000519622 C3orf22Q8N5N4 141 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 ST20-AS1Q8NBB2 130 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 B9D2Q9BPU9 175 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 MEGF8Q7Z7M0 2845 aa2.81□□□□□ -1.96
PABPC1-212ENST00000519622 KMT2AQ03164 3969 aa2.8□□□□□ -1.96
PABPC1-212ENST00000519622 LOC107984640A0A0U1RRK4 108 aa2.8□□□□□ -1.96
PABPC1-212ENST00000519622 RPL37AP8A6NKH3 93 aa2.8□□□□□ -1.96
PABPC1-212ENST00000519622 H3BQ85 93 aa2.8□□□□□ -1.96
PABPC1-212ENST00000519622 CRYGAP11844 174 aa2.8□□□□□ -1.96
PABPC1-212ENST00000519622 ATOX1O00244 68 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 UQCRQO14949 82 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
PABPC1-212ENST00000519622 MRPL55Q7Z7F7 128 aaKnown RBP2.79□□□□□ -1.96
PABPC1-212ENST00000519622 KRTAP13-1Q8IUC0 172 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
PABPC1-212ENST00000519622 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 C16orf90A8MZG2 172 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 OXTP01178 125 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 CHTF8P0CG12 524 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 PDE6GP18545 87 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 CXCL6P80162 114 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 NKAPP1Q8N9T2 125 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 RMI2Q96E14 147 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 SPRR4Q96PI1 79 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
PABPC1-212ENST00000519622 PKD1P98161 4303 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 A0A087X002 238 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 SPRR1BP22528 89 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 SCXQ7RTU7 201 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 Q8NBF4 154 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 DSCR8Q96T75 97 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 UBL5Q9BZL1 73 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 DHRS4-AS1Q9P1J3 65 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 TENM2Q9NT68 2774 aa2.77□□□□□ -1.97
PABPC1-212ENST00000519622 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 BPY2O14599 106 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 BCE1O60756 84 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 DSCR10P59022 87 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 REG3GQ6UW15 175 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 Q6ZR54 194 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
PABPC1-212ENST00000519622 Q8N9L7 120 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 C9orf163Q8N9P6 203 aa2.76□□□□□ -1.97
PABPC1-212ENST00000519622 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 LCE6AA0A183 80 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 PRLHP81277 87 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 OCR1Q9BZK8 76 aa2.75□□□□□ -1.97
PABPC1-212ENST00000519622 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.74□□□□□ -1.97
PABPC1-212ENST00000519622 TRAV7A0A075B6U4 112 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 IGKV2-24A0A0C4DH68 120 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 H0Y9J4 135 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 C3orf84H3BNL1 204 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 H7BZZ5 65 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 HAMPP81172 84 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 C1orf137Q5JT78 98 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 DEFB105AQ8NG35 78 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 SPACA4Q8TDM5 124 aa2.74□□□□□ -1.97
PABPC1-212ENST00000519622 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
PABPC1-212ENST00000519622 A0A1B0GW54 56 aa2.73□□□□□ -1.97
PABPC1-212ENST00000519622 NUPR2A6NF83 97 aa2.73□□□□□ -1.97
PABPC1-212ENST00000519622 FUSP35637 526 aaKnown RBP eCLIP2.73□□□□□ -1.97
PABPC1-212ENST00000519622 KLKP1Q107X0 134 aa2.73□□□□□ -1.97
PABPC1-212ENST00000519622 A0A087WTM6 91 aa2.72□□□□□ -1.97
PABPC1-212ENST00000519622 A0A0U1RQV1 116 aa2.72□□□□□ -1.97
PABPC1-212ENST00000519622 UBE2BP63146 152 aa2.72□□□□□ -1.97
PABPC1-212ENST00000519622 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
PABPC1-212ENST00000519622 K7EQZ3 153 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 TMEM258P61165 79 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 NREPQ16612 68 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 LINC00483Q53H64 154 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 UBE2DNLQ8IWF7 75 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
PABPC1-212ENST00000519622 SMIM20Q8N5G0 67 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms