RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 Q96NJ1 140 aa7.83□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 VAMP3Q15836 100 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 Q6ZQY7 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 Q6ZVH6 145 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 KRTAP9-8Q9BYQ0 159 aa7.82□□□□□ -1.16
CSGALNACT1-204ENST00000517494 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
CSGALNACT1-204ENST00000517494 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
CSGALNACT1-204ENST00000517494 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
CSGALNACT1-204ENST00000517494 hADV29S1A0JD25 119 aa7.79□□□□□ -1.16
CSGALNACT1-204ENST00000517494 LST1O00453 97 aa7.78□□□□□ -1.16
CSGALNACT1-204ENST00000517494 OCIAD2Q56VL3 154 aa7.78□□□□□ -1.16
CSGALNACT1-204ENST00000517494 H3BUT2 72 aa7.75□□□□□ -1.17
CSGALNACT1-204ENST00000517494 SNHG12Q9BXW3 62 aa7.74□□□□□ -1.17
CSGALNACT1-204ENST00000517494 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
CSGALNACT1-204ENST00000517494 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
CSGALNACT1-204ENST00000517494 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
CSGALNACT1-204ENST00000517494 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
CSGALNACT1-204ENST00000517494 A8MUU9 505 aa7.7□□□□□ -1.18
CSGALNACT1-204ENST00000517494 MT2AP02795 61 aa7.7□□□□□ -1.18
CSGALNACT1-204ENST00000517494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
CSGALNACT1-204ENST00000517494 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
CSGALNACT1-204ENST00000517494 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
CSGALNACT1-204ENST00000517494 SCGB1D1O95968 90 aa7.68□□□□□ -1.18
CSGALNACT1-204ENST00000517494 DSCR10P59022 87 aa7.67□□□□□ -1.18
CSGALNACT1-204ENST00000517494 PPDPFLQ8WWR9 84 aa7.67□□□□□ -1.18
CSGALNACT1-204ENST00000517494 C12orf57Q99622 126 aa7.67□□□□□ -1.18
CSGALNACT1-204ENST00000517494 LCE2BO14633 110 aa7.65□□□□□ -1.18
CSGALNACT1-204ENST00000517494 MT1FP04733 61 aa7.65□□□□□ -1.18
CSGALNACT1-204ENST00000517494 MACF1Q9UPN3 7388 aaKnown RBP7.64□□□□□ -1.19
CSGALNACT1-204ENST00000517494 A0A087WSZ3 146 aa7.64□□□□□ -1.19
CSGALNACT1-204ENST00000517494 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
CSGALNACT1-204ENST00000517494 BVES-AS1Q5T3Y7 98 aa7.64□□□□□ -1.19
CSGALNACT1-204ENST00000517494 COA6Q5JTJ3 125 aaKnown RBP7.63□□□□□ -1.19
CSGALNACT1-204ENST00000517494 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
CSGALNACT1-204ENST00000517494 SNRPEP62304 92 aaKnown RBP7.61□□□□□ -1.19
CSGALNACT1-204ENST00000517494 TEN1Q86WV5 123 aa7.61□□□□□ -1.19
CSGALNACT1-204ENST00000517494 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
CSGALNACT1-204ENST00000517494 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
CSGALNACT1-204ENST00000517494 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
CSGALNACT1-204ENST00000517494 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
CSGALNACT1-204ENST00000517494 NDUFV3P56181 108 aaKnown RBP7.58□□□□□ -1.2
CSGALNACT1-204ENST00000517494 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
CSGALNACT1-204ENST00000517494 SNCGO76070 127 aa7.56□□□□□ -1.2
CSGALNACT1-204ENST00000517494 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
CSGALNACT1-204ENST00000517494 LINC00313P59037 77 aa7.55□□□□□ -1.2
CSGALNACT1-204ENST00000517494 H3BMG7 143 aa7.54□□□□□ -1.2
CSGALNACT1-204ENST00000517494 HRES1P13985 223 aa7.54□□□□□ -1.2
CSGALNACT1-204ENST00000517494 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
CSGALNACT1-204ENST00000517494 FABP2P12104 132 aa7.52□□□□□ -1.21
CSGALNACT1-204ENST00000517494 FAM218AQ96MZ4 157 aa7.51□□□□□ -1.21
CSGALNACT1-204ENST00000517494 TMA7Q9Y2S6 64 aaKnown RBP7.51□□□□□ -1.21
CSGALNACT1-204ENST00000517494 LOC105371267A0A1B0GV96 52 aa7.5□□□□□ -1.21
CSGALNACT1-204ENST00000517494 MPLKIPQ8TAP9 179 aa7.5□□□□□ -1.21
CSGALNACT1-204ENST00000517494 RAB37Q96AX2 223 aa7.5□□□□□ -1.21
CSGALNACT1-204ENST00000517494 LINC00846Q9NV44 126 aa7.5□□□□□ -1.21
CSGALNACT1-204ENST00000517494 S100A2P29034 98 aa7.49□□□□□ -1.21
CSGALNACT1-204ENST00000517494 A0A1B0GV72 72 aa7.48□□□□□ -1.21
CSGALNACT1-204ENST00000517494 A0A1W2PNM2 257 aa7.48□□□□□ -1.21
CSGALNACT1-204ENST00000517494 H0YGX0 51 aa7.48□□□□□ -1.21
CSGALNACT1-204ENST00000517494 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
CSGALNACT1-204ENST00000517494 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
CSGALNACT1-204ENST00000517494 IGHV6-1A0A0B4J1U7 121 aa7.46□□□□□ -1.22
CSGALNACT1-204ENST00000517494 HIST1H2BLQ99880 126 aa7.46□□□□□ -1.22
CSGALNACT1-204ENST00000517494 GHRHP01286 108 aa7.45□□□□□ -1.22
CSGALNACT1-204ENST00000517494 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
CSGALNACT1-204ENST00000517494 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
CSGALNACT1-204ENST00000517494 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
CSGALNACT1-204ENST00000517494 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
CSGALNACT1-204ENST00000517494 COX8AP10176 69 aa7.41□□□□□ -1.22
CSGALNACT1-204ENST00000517494 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
CSGALNACT1-204ENST00000517494 TRBV7-4A0A0J9YYF1 115 aa7.39□□□□□ -1.23
CSGALNACT1-204ENST00000517494 A0A1B0GX51 115 aa7.38□□□□□ -1.23
CSGALNACT1-204ENST00000517494 TRACP01848 142 aa7.37□□□□□ -1.23
CSGALNACT1-204ENST00000517494 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
CSGALNACT1-204ENST00000517494 C14orf144Q96I85 54 aa7.36□□□□□ -1.23
CSGALNACT1-204ENST00000517494 DNAL4O96015 105 aa7.35□□□□□ -1.23
CSGALNACT1-204ENST00000517494 CCKP06307 115 aa7.35□□□□□ -1.23
CSGALNACT1-204ENST00000517494 SPINK7P58062 85 aa7.35□□□□□ -1.23
CSGALNACT1-204ENST00000517494 DLEU1O43261 78 aa7.34□□□□□ -1.23
CSGALNACT1-204ENST00000517494 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
CSGALNACT1-204ENST00000517494 ORMDL1Q9P0S3 153 aa7.34□□□□□ -1.23
CSGALNACT1-204ENST00000517494 PRO1854Q9UHT4 67 aa7.34□□□□□ -1.23
CSGALNACT1-204ENST00000517494 A8MWP4 228 aa7.33□□□□□ -1.24
CSGALNACT1-204ENST00000517494 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
CSGALNACT1-204ENST00000517494 TRIAP1O43715 76 aa7.33□□□□□ -1.24
CSGALNACT1-204ENST00000517494 S100A6P06703 90 aa7.33□□□□□ -1.24
CSGALNACT1-204ENST00000517494 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
CSGALNACT1-204ENST00000517494 VPS25Q9BRG1 176 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms