RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 Q1RN00 199 aa5.41□□□□□ -1.54
RNF4-221ENST00000513643 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
RNF4-221ENST00000513643 IGLV8-61A0A075B6I0 122 aa5.4□□□□□ -1.54
RNF4-221ENST00000513643 hADV29S1A0JD25 119 aa5.4□□□□□ -1.54
RNF4-221ENST00000513643 C12orf57Q99622 126 aa5.4□□□□□ -1.54
RNF4-221ENST00000513643 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
RNF4-221ENST00000513643 BVES-AS1Q5T3Y7 98 aa5.39□□□□□ -1.55
RNF4-221ENST00000513643 CEND1Q8N111 149 aa5.39□□□□□ -1.55
RNF4-221ENST00000513643 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.38□□□□□ -1.55
RNF4-221ENST00000513643 Q6ZQY7 126 aa5.38□□□□□ -1.55
RNF4-221ENST00000513643 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
RNF4-221ENST00000513643 FXYD2P54710 66 aa5.37□□□□□ -1.55
RNF4-221ENST00000513643 PPDPFLQ8WWR9 84 aa5.37□□□□□ -1.55
RNF4-221ENST00000513643 H0YGX0 51 aa5.36□□□□□ -1.55
RNF4-221ENST00000513643 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
RNF4-221ENST00000513643 XP32Q5T750 250 aa5.36□□□□□ -1.55
RNF4-221ENST00000513643 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
RNF4-221ENST00000513643 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
RNF4-221ENST00000513643 H7C2G1 150 aa5.35□□□□□ -1.55
RNF4-221ENST00000513643 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
RNF4-221ENST00000513643 RAB37Q96AX2 223 aa5.35□□□□□ -1.55
RNF4-221ENST00000513643 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
RNF4-221ENST00000513643 PRO1854Q9UHT4 67 aa5.35□□□□□ -1.55
RNF4-221ENST00000513643 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
RNF4-221ENST00000513643 C1orf195Q5TG92 126 aa5.34□□□□□ -1.55
RNF4-221ENST00000513643 A0A1B0GX51 115 aa5.33□□□□□ -1.56
RNF4-221ENST00000513643 HSD52Q0P140 79 aa5.33□□□□□ -1.56
RNF4-221ENST00000513643 Q6JHZ5 121 aa5.33□□□□□ -1.56
RNF4-221ENST00000513643 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
RNF4-221ENST00000513643 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
RNF4-221ENST00000513643 UQCR10Q9UDW1 63 aa5.32□□□□□ -1.56
RNF4-221ENST00000513643 TRIAP1O43715 76 aa5.3□□□□□ -1.56
RNF4-221ENST00000513643 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
RNF4-221ENST00000513643 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
RNF4-221ENST00000513643 F8WEM9 126 aa5.29□□□□□ -1.56
RNF4-221ENST00000513643 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
RNF4-221ENST00000513643 Q6Q795 121 aa5.29□□□□□ -1.56
RNF4-221ENST00000513643 SNHG12Q9BXW3 62 aa5.28□□□□□ -1.56
RNF4-221ENST00000513643 K7ERJ3 54 aa5.27□□□□□ -1.57
RNF4-221ENST00000513643 TCL1BO95988 128 aa5.27□□□□□ -1.57
RNF4-221ENST00000513643 NDUFV3P56181 108 aaKnown RBP5.27□□□□□ -1.57
RNF4-221ENST00000513643 A0A0U1RQV1 116 aa5.26□□□□□ -1.57
RNF4-221ENST00000513643 H3BUT2 72 aa5.26□□□□□ -1.57
RNF4-221ENST00000513643 SNCGO76070 127 aa5.26□□□□□ -1.57
RNF4-221ENST00000513643 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
RNF4-221ENST00000513643 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
RNF4-221ENST00000513643 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
RNF4-221ENST00000513643 H3BMG7 143 aa5.22□□□□□ -1.57
RNF4-221ENST00000513643 H3BQ85 93 aa5.22□□□□□ -1.57
RNF4-221ENST00000513643 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
RNF4-221ENST00000513643 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
RNF4-221ENST00000513643 A0A1W2PNM2 257 aa5.21□□□□□ -1.58
RNF4-221ENST00000513643 COX6CP09669 75 aa5.21□□□□□ -1.58
RNF4-221ENST00000513643 LOC105371267A0A1B0GV96 52 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 LST1O00453 97 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 TRACP01848 142 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 FABP2P12104 132 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 PSMB2P49721 201 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 PCOTHQ58A44 107 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 Q96NJ1 140 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 ORMDL1Q9P0S3 153 aa5.2□□□□□ -1.58
RNF4-221ENST00000513643 TMEM256-PLSCR3K7ERE1 68 aa5.19□□□□□ -1.58
RNF4-221ENST00000513643 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
RNF4-221ENST00000513643 UBE2V1Q13404 147 aa5.19□□□□□ -1.58
RNF4-221ENST00000513643 A0A087WSZ3 146 aa5.17□□□□□ -1.58
RNF4-221ENST00000513643 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
RNF4-221ENST00000513643 DNAL4O96015 105 aa5.17□□□□□ -1.58
RNF4-221ENST00000513643 SS18L2Q9UHA2 77 aa5.17□□□□□ -1.58
RNF4-221ENST00000513643 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
RNF4-221ENST00000513643 M0R143 59 aa5.16□□□□□ -1.58
RNF4-221ENST00000513643 SMCPP49901 116 aaPredicted RBP5.15□□□□□ -1.59
RNF4-221ENST00000513643 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.59
RNF4-221ENST00000513643 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
RNF4-221ENST00000513643 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
RNF4-221ENST00000513643 Q75L30 129 aa5.14□□□□□ -1.59
RNF4-221ENST00000513643 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
RNF4-221ENST00000513643 OBSCN-AS1Q96MR7 158 aa5.13□□□□□ -1.59
RNF4-221ENST00000513643 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
RNF4-221ENST00000513643 BAALC-AS2P0C853 105 aa5.12□□□□□ -1.59
RNF4-221ENST00000513643 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
RNF4-221ENST00000513643 A8MUU9 505 aa5.11□□□□□ -1.59
RNF4-221ENST00000513643 TSTD3H0UI37 97 aa5.1□□□□□ -1.59
RNF4-221ENST00000513643 CCKP06307 115 aa5.1□□□□□ -1.59
RNF4-221ENST00000513643 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
RNF4-221ENST00000513643 RBM3P98179 157 aaKnown RBP5.1□□□□□ -1.59
RNF4-221ENST00000513643 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
RNF4-221ENST00000513643 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
RNF4-221ENST00000513643 A0A1B0GV72 72 aa5.08□□□□□ -1.6
RNF4-221ENST00000513643 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
RNF4-221ENST00000513643 MT1HP80294 61 aa5.08□□□□□ -1.6
RNF4-221ENST00000513643 TRBV20-1A0A075B6N2 111 aa5.06□□□□□ -1.6
RNF4-221ENST00000513643 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
RNF4-221ENST00000513643 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
RNF4-221ENST00000513643 DSCR8Q96T75 97 aa5.06□□□□□ -1.6
RNF4-221ENST00000513643 A0A1B0GW54 56 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 C9JAW5 83 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 JMJD7-PLA2G4BH0Y9G9 81 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 TAX1BP3O14907 124 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 IGKV4-1P06312 121 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 DSCR10P59022 87 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms