RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 CDIP1Q9H305 208 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 LAMTOR3Q9UHA4 124 aa5.38□□□□□ -1.55
NUP54-207ENST00000508583 hADV29S1A0JD25 119 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 H0YGX0 51 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 M0R143 59 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 SPRR1BP22528 89 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 FXYD2P54710 66 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 LINC00575Q6W349 94 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 SSBP3-AS1Q7Z2R9 100 aa5.37□□□□□ -1.55
NUP54-207ENST00000508583 IGLV9-49A0A0B4J1Y8 123 aa5.36□□□□□ -1.55
NUP54-207ENST00000508583 COX6CP09669 75 aa5.36□□□□□ -1.55
NUP54-207ENST00000508583 C9orf153Q5TBE3 101 aa5.36□□□□□ -1.55
NUP54-207ENST00000508583 ST20-AS1Q8NBB2 130 aa5.36□□□□□ -1.55
NUP54-207ENST00000508583 Q8NBF4 154 aa5.36□□□□□ -1.55
NUP54-207ENST00000508583 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 LOC105371267A0A1B0GV96 52 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 MOBPQ13875 183 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.35□□□□□ -1.55
NUP54-207ENST00000508583 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 DEFB105AQ8NG35 78 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 PPDPFLQ8WWR9 84 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 PRO1933Q9H354 126 aa5.35□□□□□ -1.55
NUP54-207ENST00000508583 SPINK1P00995 79 aa5.34□□□□□ -1.55
NUP54-207ENST00000508583 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
NUP54-207ENST00000508583 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
NUP54-207ENST00000508583 A0A1B0GX51 115 aa5.33□□□□□ -1.56
NUP54-207ENST00000508583 F8WEM9 126 aa5.33□□□□□ -1.56
NUP54-207ENST00000508583 PSMB2P49721 201 aa5.33□□□□□ -1.56
NUP54-207ENST00000508583 TSPAN13O95857 204 aa5.32□□□□□ -1.56
NUP54-207ENST00000508583 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
NUP54-207ENST00000508583 Q6ZQY7 126 aa5.32□□□□□ -1.56
NUP54-207ENST00000508583 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
NUP54-207ENST00000508583 H3BQ85 93 aa5.31□□□□□ -1.56
NUP54-207ENST00000508583 K7ERJ3 54 aa5.3□□□□□ -1.56
NUP54-207ENST00000508583 TRIAP1O43715 76 aa5.3□□□□□ -1.56
NUP54-207ENST00000508583 DNAL4O96015 105 aa5.3□□□□□ -1.56
NUP54-207ENST00000508583 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
NUP54-207ENST00000508583 Q8N377 158 aa5.29□□□□□ -1.56
NUP54-207ENST00000508583 LIMD2Q9BT23 127 aa5.29□□□□□ -1.56
NUP54-207ENST00000508583 SNHG12Q9BXW3 62 aa5.29□□□□□ -1.56
NUP54-207ENST00000508583 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
NUP54-207ENST00000508583 CD164Q04900 197 aa5.28□□□□□ -1.56
NUP54-207ENST00000508583 PRR4Q16378 134 aa5.28□□□□□ -1.56
NUP54-207ENST00000508583 LYRM7Q5U5X0 104 aa5.28□□□□□ -1.56
NUP54-207ENST00000508583 Q6JHZ5 121 aa5.28□□□□□ -1.56
NUP54-207ENST00000508583 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
NUP54-207ENST00000508583 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
NUP54-207ENST00000508583 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
NUP54-207ENST00000508583 ORMDL1Q9P0S3 153 aa5.25□□□□□ -1.57
NUP54-207ENST00000508583 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
NUP54-207ENST00000508583 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
NUP54-207ENST00000508583 TRACP01848 142 aa5.24□□□□□ -1.57
NUP54-207ENST00000508583 CLEC2BQ92478 149 aa5.24□□□□□ -1.57
NUP54-207ENST00000508583 FABP2P12104 132 aa5.23□□□□□ -1.57
NUP54-207ENST00000508583 BATFQ16520 125 aa5.23□□□□□ -1.57
NUP54-207ENST00000508583 LST1O00453 97 aa5.22□□□□□ -1.57
NUP54-207ENST00000508583 TCL1BO95988 128 aa5.22□□□□□ -1.57
NUP54-207ENST00000508583 NDUFV3P56181 108 aaKnown RBP5.22□□□□□ -1.57
NUP54-207ENST00000508583 ATXN8Q156A1 80 aa5.22□□□□□ -1.57
NUP54-207ENST00000508583 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
NUP54-207ENST00000508583 Q5XG85 94 aa5.22□□□□□ -1.57
NUP54-207ENST00000508583 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
NUP54-207ENST00000508583 HRCT1Q6UXD1 115 aa5.21□□□□□ -1.58
NUP54-207ENST00000508583 RETNLBQ9BQ08 111 aa5.21□□□□□ -1.58
NUP54-207ENST00000508583 TRBV20-1A0A075B6N2 111 aa5.2□□□□□ -1.58
NUP54-207ENST00000508583 H3BMG7 143 aa5.2□□□□□ -1.58
NUP54-207ENST00000508583 IGFL1Q6UW32 110 aa5.2□□□□□ -1.58
NUP54-207ENST00000508583 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
NUP54-207ENST00000508583 H3BS24 57 aa5.19□□□□□ -1.58
NUP54-207ENST00000508583 UBE2V1Q13404 147 aa5.19□□□□□ -1.58
NUP54-207ENST00000508583 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
NUP54-207ENST00000508583 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
NUP54-207ENST00000508583 H3BUT2 72 aa5.18□□□□□ -1.58
NUP54-207ENST00000508583 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
NUP54-207ENST00000508583 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
NUP54-207ENST00000508583 Q6Q795 121 aa5.17□□□□□ -1.58
NUP54-207ENST00000508583 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
NUP54-207ENST00000508583 LPAP08519 4548 aa5.16□□□□□ -1.58
NUP54-207ENST00000508583 C9orf118A6NHY6 69 aa5.16□□□□□ -1.58
NUP54-207ENST00000508583 LRP2P98164 4655 aa5.16□□□□□ -1.58
NUP54-207ENST00000508583 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
NUP54-207ENST00000508583 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
NUP54-207ENST00000508583 COL5A1-AS1Q5SY13 56 aa5.15□□□□□ -1.59
NUP54-207ENST00000508583 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.59
NUP54-207ENST00000508583 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
NUP54-207ENST00000508583 A0A0G2JQZ4 141 aa5.14□□□□□ -1.59
NUP54-207ENST00000508583 RBM3P98179 157 aaKnown RBP5.14□□□□□ -1.59
NUP54-207ENST00000508583 DSCR8Q96T75 97 aa5.14□□□□□ -1.59
NUP54-207ENST00000508583 A0A1W2PPM0 123 aa5.13□□□□□ -1.59
NUP54-207ENST00000508583 JMJD7-PLA2G4BH0Y9G9 81 aa5.13□□□□□ -1.59
NUP54-207ENST00000508583 TAX1BP3O14907 124 aa5.13□□□□□ -1.59
NUP54-207ENST00000508583 TRBV7-4A0A0J9YYF1 115 aa5.12□□□□□ -1.59
NUP54-207ENST00000508583 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
NUP54-207ENST00000508583 C9JAW5 83 aa5.11□□□□□ -1.59
NUP54-207ENST00000508583 PDE6GP18545 87 aa5.11□□□□□ -1.59
NUP54-207ENST00000508583 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
NUP54-207ENST00000508583 A0A087WSZ3 146 aa5.1□□□□□ -1.59
NUP54-207ENST00000508583 A0A1B0GV72 72 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms