RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 KRTAP17-1Q9BYP8 105 aa10.48□□□□□ -0.73
RNF4-209ENST00000507784 KIAA1109Q2LD37 5005 aa10.47□□□□□ -0.73
RNF4-209ENST00000507784 F8WEM9 126 aa10.47□□□□□ -0.73
RNF4-209ENST00000507784 SMIM29Q86T20 159 aa10.47□□□□□ -0.73
RNF4-209ENST00000507784 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
RNF4-209ENST00000507784 VPS13BQ7Z7G8 4022 aa10.45□□□□□ -0.74
RNF4-209ENST00000507784 HSPG2P98160 4391 aa10.45□□□□□ -0.74
RNF4-209ENST00000507784 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
RNF4-209ENST00000507784 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
RNF4-209ENST00000507784 BIRC6Q9NR09 4857 aa10.44□□□□□ -0.74
RNF4-209ENST00000507784 ETDBQ3ZM63 59 aa10.43□□□□□ -0.74
RNF4-209ENST00000507784 SRRM2Q9UQ35 2752 aaKnown RBP10.42□□□□□ -0.74
RNF4-209ENST00000507784 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
RNF4-209ENST00000507784 JMJD7-PLA2G4BH0Y9G9 81 aa10.41□□□□□ -0.74
RNF4-209ENST00000507784 FAT1Q14517 4588 aa10.41□□□□□ -0.74
RNF4-209ENST00000507784 KRTAP1-4P0C5Y4 121 aa10.4□□□□□ -0.74
RNF4-209ENST00000507784 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
RNF4-209ENST00000507784 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
RNF4-209ENST00000507784 FAM229BQ4G0N7 80 aa10.39□□□□□ -0.75
RNF4-209ENST00000507784 CRYGAP11844 174 aa10.38□□□□□ -0.75
RNF4-209ENST00000507784 MOBPQ13875 183 aa10.37□□□□□ -0.75
RNF4-209ENST00000507784 DSCR8Q96T75 97 aa10.37□□□□□ -0.75
RNF4-209ENST00000507784 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
RNF4-209ENST00000507784 OBSCN-AS1Q96MR7 158 aa10.36□□□□□ -0.75
RNF4-209ENST00000507784 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
RNF4-209ENST00000507784 A0A087X002 238 aa10.35□□□□□ -0.75
RNF4-209ENST00000507784 Q8NBF4 154 aa10.34□□□□□ -0.75
RNF4-209ENST00000507784 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
RNF4-209ENST00000507784 KRTAP13-2Q52LG2 175 aa10.33□□□□□ -0.76
RNF4-209ENST00000507784 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
RNF4-209ENST00000507784 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
RNF4-209ENST00000507784 Q6JHZ5 121 aa10.32□□□□□ -0.76
RNF4-209ENST00000507784 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
RNF4-209ENST00000507784 TYMSOSQ8TAI1 123 aa10.31□□□□□ -0.76
RNF4-209ENST00000507784 VPS25Q9BRG1 176 aa10.31□□□□□ -0.76
RNF4-209ENST00000507784 KRTAP4-5Q9BYR2 181 aa10.31□□□□□ -0.76
RNF4-209ENST00000507784 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
RNF4-209ENST00000507784 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
RNF4-209ENST00000507784 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
RNF4-209ENST00000507784 PDE6GP18545 87 aa10.27□□□□□ -0.77
RNF4-209ENST00000507784 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
RNF4-209ENST00000507784 Q6ZQT0 140 aa10.27□□□□□ -0.77
RNF4-209ENST00000507784 CCKP06307 115 aa10.26□□□□□ -0.77
RNF4-209ENST00000507784 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
RNF4-209ENST00000507784 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.77
RNF4-209ENST00000507784 HERC2O95714 4834 aa10.21□□□□□ -0.78
RNF4-209ENST00000507784 C21orf62-AS1Q17RA5 79 aa10.2□□□□□ -0.78
RNF4-209ENST00000507784 J3QR89 54 aa10.19□□□□□ -0.78
RNF4-209ENST00000507784 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
RNF4-209ENST00000507784 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
RNF4-209ENST00000507784 TRBV7-7A0A0K0K1E9 115 aa10.15□□□□□ -0.78
RNF4-209ENST00000507784 OXTP01178 125 aa10.15□□□□□ -0.78
RNF4-209ENST00000507784 CD164Q04900 197 aa10.15□□□□□ -0.78
RNF4-209ENST00000507784 Q6Q795 121 aa10.15□□□□□ -0.78
RNF4-209ENST00000507784 A0A087WSZ3 146 aa10.13□□□□□ -0.79
RNF4-209ENST00000507784 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
RNF4-209ENST00000507784 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
RNF4-209ENST00000507784 K7ERU9 68 aa10.11□□□□□ -0.79
RNF4-209ENST00000507784 ACYP1P07311 99 aa10.11□□□□□ -0.79
RNF4-209ENST00000507784 A0A1B0GW54 56 aa10.1□□□□□ -0.79
RNF4-209ENST00000507784 SPINK1P00995 79 aa10.09□□□□□ -0.79
RNF4-209ENST00000507784 LINC00846Q9NV44 126 aa10.08□□□□□ -0.8
RNF4-209ENST00000507784 FAM240AA0A1B0GVK7 77 aa10.07□□□□□ -0.8
RNF4-209ENST00000507784 KRTAP29-1A8MX34 341 aaPredicted RBP10.07□□□□□ -0.8
RNF4-209ENST00000507784 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
RNF4-209ENST00000507784 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
RNF4-209ENST00000507784 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
RNF4-209ENST00000507784 NREPQ16612 68 aa10.06□□□□□ -0.8
RNF4-209ENST00000507784 LIMD2Q9BT23 127 aa10.06□□□□□ -0.8
RNF4-209ENST00000507784 SS18L2Q9UHA2 77 aa10.06□□□□□ -0.8
RNF4-209ENST00000507784 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
RNF4-209ENST00000507784 J3QL48 77 aa10.03□□□□□ -0.8
RNF4-209ENST00000507784 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
RNF4-209ENST00000507784 Q6ZVQ6 151 aa10.02□□□□□ -0.81
RNF4-209ENST00000507784 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
RNF4-209ENST00000507784 DEFB116Q30KQ4 102 aa9.99□□□□□ -0.81
RNF4-209ENST00000507784 Q5XG85 94 aa9.98□□□□□ -0.81
RNF4-209ENST00000507784 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
RNF4-209ENST00000507784 BPY2O14599 106 aa9.94□□□□□ -0.82
RNF4-209ENST00000507784 CDIP1Q9H305 208 aa9.94□□□□□ -0.82
RNF4-209ENST00000507784 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
RNF4-209ENST00000507784 TNXBP22105 4242 aa9.93□□□□□ -0.82
RNF4-209ENST00000507784 IGKV4-1P06312 121 aa9.93□□□□□ -0.82
RNF4-209ENST00000507784 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
RNF4-209ENST00000507784 Q96NJ1 140 aa9.93□□□□□ -0.82
RNF4-209ENST00000507784 SIGMAR1Q99720 223 aa9.92□□□□□ -0.82
RNF4-209ENST00000507784 MYCBP2O75592 4640 aa9.91□□□□□ -0.82
RNF4-209ENST00000507784 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
RNF4-209ENST00000507784 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
RNF4-209ENST00000507784 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
RNF4-209ENST00000507784 J3KT08 172 aa9.89□□□□□ -0.83
RNF4-209ENST00000507784 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
RNF4-209ENST00000507784 DSCR10P59022 87 aa9.84□□□□□ -0.83
RNF4-209ENST00000507784 CXCL6P80162 114 aa9.84□□□□□ -0.83
RNF4-209ENST00000507784 ATP5EP2Q5VTU8 51 aa9.84□□□□□ -0.83
RNF4-209ENST00000507784 NDUFB1O75438 58 aa9.83□□□□□ -0.84
RNF4-209ENST00000507784 A8MWP4 228 aa9.81□□□□□ -0.84
RNF4-209ENST00000507784 Q8N9L7 120 aa9.81□□□□□ -0.84
RNF4-209ENST00000507784 PCLOQ9Y6V0 5065 aa9.8□□□□□ -0.84
RNF4-209ENST00000507784 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms