RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 WT1-ASQ06250 92 aa0.9□□□□□ -2.27
SPCS3-202ENST00000507001 USMG5Q96IX5 58 aa0.9□□□□□ -2.27
SPCS3-202ENST00000507001 MRPL34Q9BQ48 92 aaKnown RBP0.9□□□□□ -2.27
SPCS3-202ENST00000507001 CRIPTQ9P021 101 aa0.9□□□□□ -2.27
SPCS3-202ENST00000507001 CACNA1EQ15878 2313 aa0.9□□□□□ -2.27
SPCS3-202ENST00000507001 ALMS1Q8TCU4 4167 aa0.9□□□□□ -2.27
SPCS3-202ENST00000507001 MMP24-AS1A0A0U1RRL7 71 aa0.89□□□□□ -2.27
SPCS3-202ENST00000507001 C10orf95Q9H7T3 257 aa0.89□□□□□ -2.27
SPCS3-202ENST00000507001 TENM3Q9P273 2699 aa0.88□□□□□ -2.27
SPCS3-202ENST00000507001 NAV3Q8IVL0 2385 aa0.88□□□□□ -2.27
SPCS3-202ENST00000507001 DEFB109BQ30KR1 87 aa0.88□□□□□ -2.27
SPCS3-202ENST00000507001 UBE2DNLQ8IWF7 75 aa0.88□□□□□ -2.27
SPCS3-202ENST00000507001 FAM208BQ5VWN6 2430 aa0.87□□□□□ -2.27
SPCS3-202ENST00000507001 COX6A2Q02221 97 aa0.87□□□□□ -2.27
SPCS3-202ENST00000507001 WFDC13Q8IUB5 93 aa0.87□□□□□ -2.27
SPCS3-202ENST00000507001 KAAG1Q9UBP8 84 aa0.87□□□□□ -2.27
SPCS3-202ENST00000507001 A0A0C4DFX4 3053 aa0.87□□□□□ -2.27
SPCS3-202ENST00000507001 PIEZO2Q9H5I5 2752 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 H3BUA1 57 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 H1FX-AS1Q4G0G2 97 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 RPL39P5Q59GN2 51 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 WFDC10BQ8IUB3 73 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 LEAP2Q969E1 77 aa0.86□□□□□ -2.27
SPCS3-202ENST00000507001 SPRR1AP35321 89 aa0.85□□□□□ -2.27
SPCS3-202ENST00000507001 CLPSL2Q6UWE3 100 aa0.85□□□□□ -2.27
SPCS3-202ENST00000507001 IGF2RP11717 2491 aa0.84□□□□□ -2.27
SPCS3-202ENST00000507001 WNK2Q9Y3S1 2297 aa0.84□□□□□ -2.27
SPCS3-202ENST00000507001 A8MTW9 85 aa0.84□□□□□ -2.27
SPCS3-202ENST00000507001 Q5VSD8 79 aa0.84□□□□□ -2.27
SPCS3-202ENST00000507001 DEFB130BP0DP73 79 aa0.83□□□□□ -2.28
SPCS3-202ENST00000507001 DEFB130AP0DP74 79 aa0.83□□□□□ -2.28
SPCS3-202ENST00000507001 SPRR1BP22528 89 aa0.83□□□□□ -2.28
SPCS3-202ENST00000507001 COX14Q96I36 57 aa0.83□□□□□ -2.28
SPCS3-202ENST00000507001 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
SPCS3-202ENST00000507001 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
SPCS3-202ENST00000507001 PTPRZ1P23471 2315 aaPredicted RBP0.82□□□□□ -2.28
SPCS3-202ENST00000507001 PCNX1Q96RV3 2341 aa0.81□□□□□ -2.28
SPCS3-202ENST00000507001 DEFB108AA8MXU0 73 aa0.81□□□□□ -2.28
SPCS3-202ENST00000507001 JMJD1CQ15652 2540 aa0.81□□□□□ -2.28
SPCS3-202ENST00000507001 REV3LO60673 3130 aa0.8□□□□□ -2.28
SPCS3-202ENST00000507001 SPTBN1Q01082 2364 aaKnown RBP0.8□□□□□ -2.28
SPCS3-202ENST00000507001 APCP25054 2843 aa0.79□□□□□ -2.28
SPCS3-202ENST00000507001 PKDREJQ9NTG1 2253 aa0.79□□□□□ -2.28
SPCS3-202ENST00000507001 H0YGG7 62 aa0.79□□□□□ -2.28
SPCS3-202ENST00000507001 H3BUX3 64 aa0.79□□□□□ -2.28
SPCS3-202ENST00000507001 LELP1Q5T871 98 aa0.79□□□□□ -2.28
SPCS3-202ENST00000507001 NOP10Q9NPE3 64 aaKnown RBP0.79□□□□□ -2.28
SPCS3-202ENST00000507001 AKAP6Q13023 2319 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 MEGF8Q7Z7M0 2845 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 DEFB105AQ8NG35 78 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 S4R3F8 94 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 MGAQ8IWI9 3026 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 ACACAQ13085 2346 aa0.78□□□□□ -2.28
SPCS3-202ENST00000507001 CHD7Q9P2D1 2997 aa0.78□□□□□ -2.29
SPCS3-202ENST00000507001 CSPG4Q6UVK1 2322 aa0.77□□□□□ -2.29
SPCS3-202ENST00000507001 PRO0255Q9UI72 69 aa0.77□□□□□ -2.29
SPCS3-202ENST00000507001 SPTA1P02549 2419 aa0.76□□□□□ -2.29
SPCS3-202ENST00000507001 F8P00451 2351 aa0.76□□□□□ -2.29
SPCS3-202ENST00000507001 OTOGQ6ZRI0 2925 aa0.75□□□□□ -2.29
SPCS3-202ENST00000507001 DEFB104AQ8WTQ1 72 aa0.75□□□□□ -2.29
SPCS3-202ENST00000507001 DSPP15924 2871 aaKnown RBP0.75□□□□□ -2.29
SPCS3-202ENST00000507001 UBR5O95071 2799 aaPredicted RBP0.75□□□□□ -2.29
SPCS3-202ENST00000507001 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
SPCS3-202ENST00000507001 SRCAPQ6ZRS2 3230 aa0.75□□□□□ -2.29
SPCS3-202ENST00000507001 COL6A3P12111 3177 aa0.75□□□□□ -2.29
SPCS3-202ENST00000507001 CEP350Q5VT06 3117 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 TNRC18O15417 2968 aaPredicted RBP0.74□□□□□ -2.29
SPCS3-202ENST00000507001 CACNA1HO95180 2353 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 STATHP02808 62 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 PRLHP81277 87 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 APLNQ9ULZ1 77 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 SPTBN4Q9H254 2564 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 SPTBN2O15020 2390 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 C2CD3Q4AC94 2353 aa0.74□□□□□ -2.29
SPCS3-202ENST00000507001 VWFP04275 2813 aa0.73□□□□□ -2.29
SPCS3-202ENST00000507001 M0QZ58 72 aa0.73□□□□□ -2.29
SPCS3-202ENST00000507001 RHPN1-AS1Q9BWJ2 59 aa0.73□□□□□ -2.29
SPCS3-202ENST00000507001 MAP1BP46821 2468 aaKnown RBP0.73□□□□□ -2.29
SPCS3-202ENST00000507001 TRANK1O15050 2925 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 WDR87Q6ZQQ6 2873 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 PRRC2CQ9Y520 2896 aaKnown RBP0.72□□□□□ -2.29
SPCS3-202ENST00000507001 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 ABCA2Q9BZC7 2435 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 APELAP0DMC3 54 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 RANBP2P49792 3224 aaKnown RBP0.72□□□□□ -2.29
SPCS3-202ENST00000507001 CEP290O15078 2479 aa0.72□□□□□ -2.29
SPCS3-202ENST00000507001 Q9Y3F1 56 aa0.71□□□□□ -2.3
SPCS3-202ENST00000507001 CEP250Q9BV73 2442 aa0.71□□□□□ -2.3
SPCS3-202ENST00000507001 SETD2Q9BYW2 2564 aaPredicted RBP0.71□□□□□ -2.3
SPCS3-202ENST00000507001 GOLGB1Q14789 3259 aaKnown RBP0.7□□□□□ -2.3
SPCS3-202ENST00000507001 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 SPINK1P00995 79 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 DEFB124Q8NES8 71 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 NBEAQ8NFP9 2946 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 CELSR2Q9HCU4 2923 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 CFAP54Q96N23 3096 aa0.7□□□□□ -2.3
SPCS3-202ENST00000507001 FRYLO94915 3013 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms