RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SSBP3-AS1Q7Z2R9 100 aa4.24□□□□□ -1.73
GYPB-206ENST00000506516 RAB37Q96AX2 223 aa4.24□□□□□ -1.73
GYPB-206ENST00000506516 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
GYPB-206ENST00000506516 IGLV9-49A0A0B4J1Y8 123 aa4.23□□□□□ -1.73
GYPB-206ENST00000506516 CEND1Q8N111 149 aa4.23□□□□□ -1.73
GYPB-206ENST00000506516 ST20-AS1Q8NBB2 130 aa4.23□□□□□ -1.73
GYPB-206ENST00000506516 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
GYPB-206ENST00000506516 C12orf57Q99622 126 aa4.23□□□□□ -1.73
GYPB-206ENST00000506516 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 CFC1P0CG37 223 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 MOBPQ13875 183 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 PRR4Q16378 134 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 C2orf91Q6ZV80 131 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 Q8NBF4 154 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 DEFB105AQ8NG35 78 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
GYPB-206ENST00000506516 SNCGO76070 127 aa4.21□□□□□ -1.74
GYPB-206ENST00000506516 SPINK1P00995 79 aa4.21□□□□□ -1.74
GYPB-206ENST00000506516 SPRR1BP22528 89 aa4.21□□□□□ -1.74
GYPB-206ENST00000506516 C9orf153Q5TBE3 101 aa4.21□□□□□ -1.74
GYPB-206ENST00000506516 UQCR10Q9UDW1 63 aa4.21□□□□□ -1.74
GYPB-206ENST00000506516 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
GYPB-206ENST00000506516 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
GYPB-206ENST00000506516 H7C2G1 150 aa4.2□□□□□ -1.74
GYPB-206ENST00000506516 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
GYPB-206ENST00000506516 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
GYPB-206ENST00000506516 HSD52Q0P140 79 aa4.19□□□□□ -1.74
GYPB-206ENST00000506516 Q1RN00 199 aa4.19□□□□□ -1.74
GYPB-206ENST00000506516 PRO1854Q9UHT4 67 aa4.19□□□□□ -1.74
GYPB-206ENST00000506516 IGLV5-48A0A075B6I7 105 aa4.18□□□□□ -1.74
GYPB-206ENST00000506516 H0YGX0 51 aa4.18□□□□□ -1.74
GYPB-206ENST00000506516 LRP2P98164 4655 aa4.17□□□□□ -1.74
GYPB-206ENST00000506516 FXYD2P54710 66 aa4.17□□□□□ -1.74
GYPB-206ENST00000506516 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
GYPB-206ENST00000506516 Q8N377 158 aa4.17□□□□□ -1.74
GYPB-206ENST00000506516 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
GYPB-206ENST00000506516 F8WEM9 126 aa4.16□□□□□ -1.74
GYPB-206ENST00000506516 LINC01547P58512 204 aaPredicted RBP4.16□□□□□ -1.74
GYPB-206ENST00000506516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.16□□□□□ -1.74
GYPB-206ENST00000506516 Q6ZQY7 126 aa4.16□□□□□ -1.74
GYPB-206ENST00000506516 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
GYPB-206ENST00000506516 RETNLBQ9BQ08 111 aa4.16□□□□□ -1.74
GYPB-206ENST00000506516 LPAP08519 4548 aa4.16□□□□□ -1.74
GYPB-206ENST00000506516 COX6CP09669 75 aa4.15□□□□□ -1.75
GYPB-206ENST00000506516 SMIM6P0DI80 62 aa4.15□□□□□ -1.75
GYPB-206ENST00000506516 OCIAD2Q56VL3 154 aa4.15□□□□□ -1.75
GYPB-206ENST00000506516 PPDPFLQ8WWR9 84 aa4.15□□□□□ -1.75
GYPB-206ENST00000506516 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 A0A1B0GX51 115 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 PSMB2P49721 201 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 CD164Q04900 197 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 HRCT1Q6UXD1 115 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 FP248Q71RG6 208 aaPredicted RBP4.14□□□□□ -1.75
GYPB-206ENST00000506516 LIMD2Q9BT23 127 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
GYPB-206ENST00000506516 M0R143 59 aa4.12□□□□□ -1.75
GYPB-206ENST00000506516 LOC105371267A0A1B0GV96 52 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 TSTD3H0UI37 97 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 K7ERJ3 54 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 DNAL4O96015 105 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 SCGB1C2P0DMR2 95 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 Q6JHZ5 121 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 FAM218AQ96MZ4 157 aa4.11□□□□□ -1.75
GYPB-206ENST00000506516 IGLV8-61A0A075B6I0 122 aa4.1□□□□□ -1.75
GYPB-206ENST00000506516 H3BQ85 93 aa4.1□□□□□ -1.75
GYPB-206ENST00000506516 TCL1BO95988 128 aa4.09□□□□□ -1.75
GYPB-206ENST00000506516 FABP2P12104 132 aa4.09□□□□□ -1.75
GYPB-206ENST00000506516 CLEC2BQ92478 149 aa4.09□□□□□ -1.75
GYPB-206ENST00000506516 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
GYPB-206ENST00000506516 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
GYPB-206ENST00000506516 TMEM256-PLSCR3K7ERE1 68 aa4.08□□□□□ -1.76
GYPB-206ENST00000506516 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
GYPB-206ENST00000506516 Q5XG85 94 aa4.08□□□□□ -1.76
GYPB-206ENST00000506516 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
GYPB-206ENST00000506516 H3BMG7 143 aa4.07□□□□□ -1.76
GYPB-206ENST00000506516 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
GYPB-206ENST00000506516 H3BUT2 72 aa4.06□□□□□ -1.76
GYPB-206ENST00000506516 TRACP01848 142 aa4.06□□□□□ -1.76
GYPB-206ENST00000506516 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
GYPB-206ENST00000506516 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
GYPB-206ENST00000506516 TRBV7-7A0A0K0K1E9 115 aa4.05□□□□□ -1.76
GYPB-206ENST00000506516 LST1O00453 97 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 BATFQ16520 125 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 ASB16-AS1Q495Z4 193 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 ANKRD29Q8N6D5 301 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
GYPB-206ENST00000506516 ATXN8Q156A1 80 aa4.03□□□□□ -1.76
GYPB-206ENST00000506516 LYRM7Q5U5X0 104 aa4.03□□□□□ -1.76
GYPB-206ENST00000506516 Q6Q795 121 aa4.03□□□□□ -1.76
GYPB-206ENST00000506516 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
GYPB-206ENST00000506516 BAALC-AS2P0C853 105 aa4.02□□□□□ -1.77
GYPB-206ENST00000506516 MUC2Q02817 5179 aa4.01□□□□□ -1.77
GYPB-206ENST00000506516 TRBV20-1A0A075B6N2 111 aa4.01□□□□□ -1.77
GYPB-206ENST00000506516 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms