RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 DIRC1Q969H9 104 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 EPPK1P58107 5090 aaKnown RBP2.7□□□□□ -1.98
RFC1-208ENST00000504849 ARHGAP32A7KAX9 2087 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 POLEQ07864 2286 aa2.7□□□□□ -1.98
RFC1-208ENST00000504849 A0A096LNT2 108 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 F8WEM9 126 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 H7BZZ5 65 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 MIFP14174 115 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 COX7BP24311 80 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 SPAG11BQ08648 103 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 C8orf17Q9NRJ1 99 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 PRO0255Q9UI72 69 aa2.69□□□□□ -1.98
RFC1-208ENST00000504849 GVQW2A0A096LPI5 108 aaPredicted RBP2.68□□□□□ -1.98
RFC1-208ENST00000504849 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 ANGP03950 147 aaKnown RBP2.68□□□□□ -1.98
RFC1-208ENST00000504849 DEFB130BP0DP73 79 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 DEFB130AP0DP74 79 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 MP68P56378 58 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 NREPQ16612 68 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 Q6ZQY7 126 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 LINC00612Q8N6U2 182 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
RFC1-208ENST00000504849 WNK1Q9H4A3 2382 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 MGAM2Q2M2H8 2515 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 TRBV7-4A0A0J9YYF1 115 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 A0A1B0GW54 56 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 ZNF73O43830 326 aaPredicted RBP2.67□□□□□ -1.98
RFC1-208ENST00000504849 IGLV1-51P01701 117 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 TLX1NBP0CAT3 122 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 CLPSL2Q6UWE3 100 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 LINC00269Q8N2A0 174 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 TMEM254Q8TBM7 123 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 RMI2Q96E14 147 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 SNURFQ9Y675 71 aa2.67□□□□□ -1.98
RFC1-208ENST00000504849 TRAV10A0A0B4J240 114 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 FUSP35637 526 aaKnown RBP eCLIP2.66□□□□□ -1.98
RFC1-208ENST00000504849 ELOF1P60002 83 aaKnown RBP2.66□□□□□ -1.98
RFC1-208ENST00000504849 DEFB113Q30KQ7 82 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 Q6ZR54 194 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 Q6ZRU5 148 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 C16orf95Q9H693 158 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
RFC1-208ENST00000504849 M0R378 163 aa2.65□□□□□ -1.99
RFC1-208ENST00000504849 ESRGQ1W209 222 aa2.65□□□□□ -1.99
RFC1-208ENST00000504849 LELP1Q5T871 98 aa2.65□□□□□ -1.99
RFC1-208ENST00000504849 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
RFC1-208ENST00000504849 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
RFC1-208ENST00000504849 IGLV10-54A0A075B6I4 117 aa2.64□□□□□ -1.99
RFC1-208ENST00000504849 A0A096LPF7 62 aa2.64□□□□□ -1.99
RFC1-208ENST00000504849 C9orf116Q5BN46 136 aaPredicted RBP2.64□□□□□ -1.99
RFC1-208ENST00000504849 UNQ6190/PRO20217Q6UXQ8 127 aa2.64□□□□□ -1.99
RFC1-208ENST00000504849 FP248Q71RG6 208 aaPredicted RBP2.64□□□□□ -1.99
RFC1-208ENST00000504849 WFDC10AQ9H1F0 79 aa2.64□□□□□ -1.99
RFC1-208ENST00000504849 ZNF706Q9Y5V0 76 aaPredicted RBP2.64□□□□□ -1.99
RFC1-208ENST00000504849 HRNRQ86YZ3 2850 aaPredicted RBP2.64□□□□□ -1.99
RFC1-208ENST00000504849 IGKV4-1P06312 121 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 SYCNQ0VAF6 134 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 SCXQ7RTU7 201 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 WFDC11Q8NEX6 87 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 C6orf48Q9UBA6 75 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 NACAE9PAV3 2078 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 VWFP04275 2813 aa2.63□□□□□ -1.99
RFC1-208ENST00000504849 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 M0R2N4 97 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 NDUFB1O75438 58 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 Q8NDZ9 215 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 SMR3AQ99954 134 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 PRR34Q9NV39 138 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 PKIGQ9Y2B9 76 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 SVEP1Q4LDE5 3571 aa2.62□□□□□ -1.99
RFC1-208ENST00000504849 SONP18583 2426 aaKnown RBP2.61□□□□□ -1.99
RFC1-208ENST00000504849 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 LINC00474Q9P2X8 69 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 KLK12Q9UKR0 248 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 CELA1Q9UNI1 258 aa2.61□□□□□ -1.99
RFC1-208ENST00000504849 UBR4Q5T4S7 5183 aa2.6□□□□□ -1.99
RFC1-208ENST00000504849 ETDCA0A1B0GVM5 59 aa2.6□□□□□ -1.99
RFC1-208ENST00000504849 KPRPQ5T749 579 aaPredicted RBP2.6□□□□□ -1.99
RFC1-208ENST00000504849 PRR15Q8IV56 129 aa2.6□□□□□ -1.99
RFC1-208ENST00000504849 CIRBP-AS1Q8TBR5 109 aa2.6□□□□□ -1.99
RFC1-208ENST00000504849 HIVEP2P31629 2446 aa2.6□□□□□ -1.99
RFC1-208ENST00000504849 RYR2Q92736 4967 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -1.99
RFC1-208ENST00000504849 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
RFC1-208ENST00000504849 LCE6AA0A183 80 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 hDV103S1A0JD37 113 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 H3BNG1 76 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 C3orf84H3BNL1 204 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 ZNF861PO60384 105 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 HTN3P15516 51 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 Q1T7F1 81 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 DEFB135Q30KP9 77 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 HIGD2AQ9BW72 106 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 CYP4F30PQ9H0H9 118 aa2.59□□□□□ -1.99
RFC1-208ENST00000504849 KCNQ1DNQ9H478 68 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms