RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
POLR2J3-210ENST00000504677 A0A1B0GV72 72 aa7.28□□□□□ -1.24
POLR2J3-210ENST00000504677 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
POLR2J3-210ENST00000504677 PKHD1P08F94 4074 aa7.27□□□□□ -1.24
POLR2J3-210ENST00000504677 CCKP06307 115 aa7.27□□□□□ -1.25
POLR2J3-210ENST00000504677 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
POLR2J3-210ENST00000504677 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
POLR2J3-210ENST00000504677 Q6ZQT0 140 aa7.26□□□□□ -1.25
POLR2J3-210ENST00000504677 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
POLR2J3-210ENST00000504677 IGLV8-61A0A075B6I0 122 aa7.25□□□□□ -1.25
POLR2J3-210ENST00000504677 XGP55808 180 aa7.25□□□□□ -1.25
POLR2J3-210ENST00000504677 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
POLR2J3-210ENST00000504677 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
POLR2J3-210ENST00000504677 Q6JHZ5 121 aa7.23□□□□□ -1.25
POLR2J3-210ENST00000504677 A0A1B0GW54 56 aa7.22□□□□□ -1.25
POLR2J3-210ENST00000504677 APOBP04114 4563 aaKnown RBP7.22□□□□□ -1.25
POLR2J3-210ENST00000504677 VPS25Q9BRG1 176 aa7.21□□□□□ -1.26
POLR2J3-210ENST00000504677 CDK2AP2O75956 126 aa7.2□□□□□ -1.26
POLR2J3-210ENST00000504677 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
POLR2J3-210ENST00000504677 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
POLR2J3-210ENST00000504677 Q8NBF4 154 aa7.18□□□□□ -1.26
POLR2J3-210ENST00000504677 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
POLR2J3-210ENST00000504677 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
POLR2J3-210ENST00000504677 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
POLR2J3-210ENST00000504677 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
POLR2J3-210ENST00000504677 BIRC6Q9NR09 4857 aa7.17□□□□□ -1.26
POLR2J3-210ENST00000504677 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
POLR2J3-210ENST00000504677 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.26
POLR2J3-210ENST00000504677 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
POLR2J3-210ENST00000504677 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
POLR2J3-210ENST00000504677 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
POLR2J3-210ENST00000504677 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
POLR2J3-210ENST00000504677 Q6Q795 121 aa7.14□□□□□ -1.27
POLR2J3-210ENST00000504677 LINC00643Q86TS7 51 aa7.14□□□□□ -1.27
POLR2J3-210ENST00000504677 EPPK1P58107 5090 aaKnown RBP7.14□□□□□ -1.27
POLR2J3-210ENST00000504677 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
POLR2J3-210ENST00000504677 CRYGAP11844 174 aa7.13□□□□□ -1.27
POLR2J3-210ENST00000504677 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
POLR2J3-210ENST00000504677 MOBPQ13875 183 aa7.12□□□□□ -1.27
POLR2J3-210ENST00000504677 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
POLR2J3-210ENST00000504677 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
POLR2J3-210ENST00000504677 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
POLR2J3-210ENST00000504677 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
POLR2J3-210ENST00000504677 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
POLR2J3-210ENST00000504677 SIGMAR1Q99720 223 aa7.1□□□□□ -1.27
POLR2J3-210ENST00000504677 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
POLR2J3-210ENST00000504677 Q6ZVQ6 151 aa7.09□□□□□ -1.27
POLR2J3-210ENST00000504677 SRRM2Q9UQ35 2752 aaKnown RBP7.08□□□□□ -1.28
POLR2J3-210ENST00000504677 CD164Q04900 197 aa7.07□□□□□ -1.28
POLR2J3-210ENST00000504677 NREPQ16612 68 aa7.07□□□□□ -1.28
POLR2J3-210ENST00000504677 FAT1Q14517 4588 aa7.06□□□□□ -1.28
POLR2J3-210ENST00000504677 A0A087WSZ3 146 aa7.06□□□□□ -1.28
POLR2J3-210ENST00000504677 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
POLR2J3-210ENST00000504677 Q5VSD8 79 aa7.06□□□□□ -1.28
POLR2J3-210ENST00000504677 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
POLR2J3-210ENST00000504677 A0A087X002 238 aa7.05□□□□□ -1.28
POLR2J3-210ENST00000504677 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
POLR2J3-210ENST00000504677 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
POLR2J3-210ENST00000504677 CXCL6P80162 114 aa7.04□□□□□ -1.28
POLR2J3-210ENST00000504677 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
POLR2J3-210ENST00000504677 HSPG2P98160 4391 aa7.04□□□□□ -1.28
POLR2J3-210ENST00000504677 RYR1P21817 5038 aa7.02□□□□□ -1.29
POLR2J3-210ENST00000504677 IGKV3D-7A0A0C4DH55 119 aa7.01□□□□□ -1.29
POLR2J3-210ENST00000504677 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
POLR2J3-210ENST00000504677 BPY2O14599 106 aa7□□□□□ -1.29
POLR2J3-210ENST00000504677 Q8N1X5 172 aa7□□□□□ -1.29
POLR2J3-210ENST00000504677 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
POLR2J3-210ENST00000504677 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
POLR2J3-210ENST00000504677 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
POLR2J3-210ENST00000504677 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
POLR2J3-210ENST00000504677 J3KT08 172 aa6.97□□□□□ -1.29
POLR2J3-210ENST00000504677 Q5XG85 94 aa6.97□□□□□ -1.29
POLR2J3-210ENST00000504677 SPAG11AQ6PDA7 123 aa6.97□□□□□ -1.29
POLR2J3-210ENST00000504677 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
POLR2J3-210ENST00000504677 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
POLR2J3-210ENST00000504677 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
POLR2J3-210ENST00000504677 SPINK1P00995 79 aa6.95□□□□□ -1.3
POLR2J3-210ENST00000504677 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
POLR2J3-210ENST00000504677 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
POLR2J3-210ENST00000504677 LINC00304Q8N9R0 145 aa6.95□□□□□ -1.3
POLR2J3-210ENST00000504677 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
POLR2J3-210ENST00000504677 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
POLR2J3-210ENST00000504677 DSCR10P59022 87 aa6.91□□□□□ -1.3
POLR2J3-210ENST00000504677 Q96NJ1 140 aa6.91□□□□□ -1.3
POLR2J3-210ENST00000504677 A8MWP4 228 aa6.9□□□□□ -1.3
POLR2J3-210ENST00000504677 IGKV4-1P06312 121 aa6.9□□□□□ -1.3
POLR2J3-210ENST00000504677 NDUFB1O75438 58 aa6.89□□□□□ -1.31
POLR2J3-210ENST00000504677 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
POLR2J3-210ENST00000504677 A0A087WVE0 104 aa6.88□□□□□ -1.31
POLR2J3-210ENST00000504677 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
POLR2J3-210ENST00000504677 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
POLR2J3-210ENST00000504677 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
POLR2J3-210ENST00000504677 K7EQZ3 153 aa6.87□□□□□ -1.31
POLR2J3-210ENST00000504677 Q8N9L7 120 aa6.87□□□□□ -1.31
POLR2J3-210ENST00000504677 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
POLR2J3-210ENST00000504677 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
POLR2J3-210ENST00000504677 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
POLR2J3-210ENST00000504677 HERC2O95714 4834 aa6.83□□□□□ -1.32
POLR2J3-210ENST00000504677 ATOX1O00244 68 aa6.83□□□□□ -1.32
POLR2J3-210ENST00000504677 OXTP01178 125 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms