RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SZT2Q5T011 3432 aa2.06□□□□□ -2.08
NIPBL-204ENST00000504430 WFDC10BQ8IUB3 73 aa2.05□□□□□ -2.08
NIPBL-204ENST00000504430 CEP250Q9BV73 2442 aa2.05□□□□□ -2.08
NIPBL-204ENST00000504430 MEGF8Q7Z7M0 2845 aa2.05□□□□□ -2.08
NIPBL-204ENST00000504430 WT1-ASQ06250 92 aa2.05□□□□□ -2.08
NIPBL-204ENST00000504430 MRPL33O75394 65 aaKnown RBP2.04□□□□□ -2.08
NIPBL-204ENST00000504430 CSMD3Q7Z407 3707 aa2.04□□□□□ -2.08
NIPBL-204ENST00000504430 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
NIPBL-204ENST00000504430 PRRC2CQ9Y520 2896 aaKnown RBP2.04□□□□□ -2.08
NIPBL-204ENST00000504430 ACACAQ13085 2346 aa2.03□□□□□ -2.08
NIPBL-204ENST00000504430 PCNX1Q96RV3 2341 aa2.03□□□□□ -2.08
NIPBL-204ENST00000504430 PRO0255Q9UI72 69 aa2.03□□□□□ -2.08
NIPBL-204ENST00000504430 MUC6Q6W4X9 2439 aa2.03□□□□□ -2.09
NIPBL-204ENST00000504430 ATRQ13535 2644 aa2.02□□□□□ -2.09
NIPBL-204ENST00000504430 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
NIPBL-204ENST00000504430 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
NIPBL-204ENST00000504430 A8MTW9 85 aa2.01□□□□□ -2.09
NIPBL-204ENST00000504430 KLK9Q2XQG4 91 aa2.01□□□□□ -2.09
NIPBL-204ENST00000504430 CSPG4Q6UVK1 2322 aa2.01□□□□□ -2.09
NIPBL-204ENST00000504430 SPRR1AP35321 89 aa2.01□□□□□ -2.09
NIPBL-204ENST00000504430 MINOS1Q5TGZ0 78 aa2.01□□□□□ -2.09
NIPBL-204ENST00000504430 Q6ZSA8 131 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 KAAG1Q9UBP8 84 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 M0QY20 66 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 AKAP13Q12802 2813 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 SPTA1P02549 2419 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 KRTAP12-3P60328 96 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 TTC28Q96AY4 2481 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 CHD7Q9P2D1 2997 aa2□□□□□ -2.09
NIPBL-204ENST00000504430 ABCA2Q9BZC7 2435 aa1.99□□□□□ -2.09
NIPBL-204ENST00000504430 PIEZO1Q92508 2521 aa1.99□□□□□ -2.09
NIPBL-204ENST00000504430 TMEM167AQ8TBQ9 72 aa1.99□□□□□ -2.09
NIPBL-204ENST00000504430 H0YGG7 62 aa1.99□□□□□ -2.09
NIPBL-204ENST00000504430 CELSR1Q9NYQ6 3014 aa1.99□□□□□ -2.09
NIPBL-204ENST00000504430 RANBP2P49792 3224 aaKnown RBP1.98□□□□□ -2.09
NIPBL-204ENST00000504430 CENPFP49454 3210 aa1.98□□□□□ -2.09
NIPBL-204ENST00000504430 AKAP6Q13023 2319 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 DEFB130BP0DP73 79 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 DEFB130AP0DP74 79 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 DEFB110Q30KQ9 67 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 CHD6Q8TD26 2715 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 USMG5Q96IX5 58 aa1.97□□□□□ -2.09
NIPBL-204ENST00000504430 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
NIPBL-204ENST00000504430 DEFB105AQ8NG35 78 aa1.96□□□□□ -2.1
NIPBL-204ENST00000504430 C6orf48Q9UBA6 75 aa1.96□□□□□ -2.1
NIPBL-204ENST00000504430 APC2O95996 2303 aa1.95□□□□□ -2.1
NIPBL-204ENST00000504430 UTRNP46939 3433 aa1.95□□□□□ -2.1
NIPBL-204ENST00000504430 BDP1A6H8Y1 2624 aa1.95□□□□□ -2.1
NIPBL-204ENST00000504430 HECTD1Q9ULT8 2610 aa1.95□□□□□ -2.1
NIPBL-204ENST00000504430 K7EIM0 57 aa1.94□□□□□ -2.1
NIPBL-204ENST00000504430 CREBBPQ92793 2442 aa1.94□□□□□ -2.1
NIPBL-204ENST00000504430 VPS13AQ96RL7 3174 aa1.94□□□□□ -2.1
NIPBL-204ENST00000504430 LYNX1G3V0Z9 82 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 DEFB1P60022 68 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 A0A0D9SG42 100 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 NAV2Q8IVL1 2488 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 HTN1P15515 57 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
NIPBL-204ENST00000504430 C5orf42Q9H799 3197 aa1.93□□□□□ -2.1
NIPBL-204ENST00000504430 NBASA2RRP1 2371 aa1.92□□□□□ -2.1
NIPBL-204ENST00000504430 WNK1Q9H4A3 2382 aa1.92□□□□□ -2.1
NIPBL-204ENST00000504430 TNRC18O15417 2968 aaPredicted RBP1.92□□□□□ -2.1
NIPBL-204ENST00000504430 MKI67P46013 3256 aaKnown RBP1.92□□□□□ -2.1
NIPBL-204ENST00000504430 CEP350Q5VT06 3117 aa1.92□□□□□ -2.1
NIPBL-204ENST00000504430 SPEGQ15772 3267 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 PRUNE2Q8WUY3 3088 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 WDR87Q6ZQQ6 2873 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 XIRP2A4UGR9 3374 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 DEFB108BQ8NET1 73 aa1.91□□□□□ -2.1
NIPBL-204ENST00000504430 HTTP42858 3142 aa1.9□□□□□ -2.11
NIPBL-204ENST00000504430 SPRR1BP22528 89 aa1.9□□□□□ -2.11
NIPBL-204ENST00000504430 COX14Q96I36 57 aa1.9□□□□□ -2.11
NIPBL-204ENST00000504430 FREM2Q5SZK8 3169 aa1.9□□□□□ -2.11
NIPBL-204ENST00000504430 FAM186AA6NE01 2351 aa1.89□□□□□ -2.11
NIPBL-204ENST00000504430 MAP1BP46821 2468 aaKnown RBP1.89□□□□□ -2.11
NIPBL-204ENST00000504430 USP34Q70CQ2 3546 aa1.89□□□□□ -2.11
NIPBL-204ENST00000504430 CEP290O15078 2479 aa1.89□□□□□ -2.11
NIPBL-204ENST00000504430 IGLV5-48A0A075B6I7 105 aa1.88□□□□□ -2.11
NIPBL-204ENST00000504430 COX6B2Q6YFQ2 88 aa1.88□□□□□ -2.11
NIPBL-204ENST00000504430 FBN2P35556 2912 aa1.87□□□□□ -2.11
NIPBL-204ENST00000504430 UBR5O95071 2799 aaPredicted RBP1.87□□□□□ -2.11
NIPBL-204ENST00000504430 RIF1Q5UIP0 2472 aaKnown RBP1.87□□□□□ -2.11
NIPBL-204ENST00000504430 EP300Q09472 2414 aaPredicted RBP1.87□□□□□ -2.11
NIPBL-204ENST00000504430 DEFB119Q8N690 84 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 OTOGQ6ZRI0 2925 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 SPENQ96T58 3664 aaKnown RBP1.86□□□□□ -2.11
NIPBL-204ENST00000504430 WDFY4Q6ZS81 3184 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 EP400Q96L91 3159 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 RELNP78509 3460 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 TRIOO75962 3097 aa1.86□□□□□ -2.11
NIPBL-204ENST00000504430 NBEAQ8NFP9 2946 aa1.85□□□□□ -2.11
NIPBL-204ENST00000504430 SPINK1P00995 79 aa1.85□□□□□ -2.11
NIPBL-204ENST00000504430 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
NIPBL-204ENST00000504430 FRYLO94915 3013 aa1.84□□□□□ -2.11
NIPBL-204ENST00000504430 UNC79Q9P2D8 2635 aa1.84□□□□□ -2.11
NIPBL-204ENST00000504430 LAMA3Q16787 3333 aa1.84□□□□□ -2.12
NIPBL-204ENST00000504430 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.12
NIPBL-204ENST00000504430 PRLHP81277 87 aa1.84□□□□□ -2.12
NIPBL-204ENST00000504430 J3QKU1 62 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 620 ms