RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 H3BT86 120 aa8.02□□□□□ -1.13
PDLIM7-211ENST00000504318 SLC25A20O43772 301 aa8.02□□□□□ -1.13
PDLIM7-211ENST00000504318 TRAV23DV6A0A075B6W5 121 aa8.01□□□□□ -1.13
PDLIM7-211ENST00000504318 B5MCH6 92 aa8.01□□□□□ -1.13
PDLIM7-211ENST00000504318 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
PDLIM7-211ENST00000504318 TRBV7-6A0A0J9YX20 115 aa8□□□□□ -1.13
PDLIM7-211ENST00000504318 DNAL4O96015 105 aa8□□□□□ -1.13
PDLIM7-211ENST00000504318 Q9BRP9 147 aa8□□□□□ -1.13
PDLIM7-211ENST00000504318 ERC2-IT1O76042 136 aa7.99□□□□□ -1.13
PDLIM7-211ENST00000504318 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
PDLIM7-211ENST00000504318 C6orf99Q4VX62 202 aa7.99□□□□□ -1.13
PDLIM7-211ENST00000504318 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
PDLIM7-211ENST00000504318 MTURNQ8N3F0 131 aa7.98□□□□□ -1.13
PDLIM7-211ENST00000504318 ZNF73O43830 326 aaPredicted RBP7.97□□□□□ -1.13
PDLIM7-211ENST00000504318 FAM218AQ96MZ4 157 aa7.97□□□□□ -1.13
PDLIM7-211ENST00000504318 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
PDLIM7-211ENST00000504318 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 J3QR89 54 aa7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 K7ERU9 68 aa7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 Q6ZRX8 168 aa7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 TEN1Q86WV5 123 aa7.96□□□□□ -1.14
PDLIM7-211ENST00000504318 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
PDLIM7-211ENST00000504318 H3BQ85 93 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 COX7BP24311 80 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 OCIAD2Q56VL3 154 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 LINC00575Q6W349 94 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 Q8NBF4 154 aa7.94□□□□□ -1.14
PDLIM7-211ENST00000504318 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
PDLIM7-211ENST00000504318 GHRHP01286 108 aa7.93□□□□□ -1.14
PDLIM7-211ENST00000504318 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
PDLIM7-211ENST00000504318 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
PDLIM7-211ENST00000504318 ELOF1P60002 83 aaKnown RBP7.92□□□□□ -1.14
PDLIM7-211ENST00000504318 ORMDL1Q9P0S3 153 aa7.92□□□□□ -1.14
PDLIM7-211ENST00000504318 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
PDLIM7-211ENST00000504318 GAGE2AQ6NT46 116 aa7.91□□□□□ -1.14
PDLIM7-211ENST00000504318 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
PDLIM7-211ENST00000504318 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
PDLIM7-211ENST00000504318 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
PDLIM7-211ENST00000504318 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
PDLIM7-211ENST00000504318 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
PDLIM7-211ENST00000504318 TMEM256-PLSCR3K7ERE1 68 aa7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 SPINK1P00995 79 aa7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 MOBPQ13875 183 aa7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 Q8N377 158 aa7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
PDLIM7-211ENST00000504318 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
PDLIM7-211ENST00000504318 ST20-AS1Q8NBB2 130 aa7.86□□□□□ -1.15
PDLIM7-211ENST00000504318 CDIP1Q9H305 208 aa7.86□□□□□ -1.15
PDLIM7-211ENST00000504318 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
PDLIM7-211ENST00000504318 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
PDLIM7-211ENST00000504318 SPRR1BP22528 89 aa7.83□□□□□ -1.16
PDLIM7-211ENST00000504318 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
PDLIM7-211ENST00000504318 Q6ZQY7 126 aa7.83□□□□□ -1.16
PDLIM7-211ENST00000504318 JMJD7-PLA2G4BH0Y9G9 81 aa7.82□□□□□ -1.16
PDLIM7-211ENST00000504318 OBSCN-AS1Q96MR7 158 aa7.8□□□□□ -1.16
PDLIM7-211ENST00000504318 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
PDLIM7-211ENST00000504318 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
PDLIM7-211ENST00000504318 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
PDLIM7-211ENST00000504318 C21orf62-AS1Q17RA5 79 aa7.78□□□□□ -1.16
PDLIM7-211ENST00000504318 ASB16-AS1Q495Z4 193 aa7.78□□□□□ -1.16
PDLIM7-211ENST00000504318 ACYP1P07311 99 aa7.77□□□□□ -1.17
PDLIM7-211ENST00000504318 VPS25Q9BRG1 176 aa7.77□□□□□ -1.17
PDLIM7-211ENST00000504318 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
PDLIM7-211ENST00000504318 PDE6GP18545 87 aa7.75□□□□□ -1.17
PDLIM7-211ENST00000504318 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
PDLIM7-211ENST00000504318 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
PDLIM7-211ENST00000504318 RBM3P98179 157 aaKnown RBP7.74□□□□□ -1.17
PDLIM7-211ENST00000504318 IGLV5-48A0A075B6I7 105 aa7.73□□□□□ -1.17
PDLIM7-211ENST00000504318 XP32Q5T750 250 aa7.73□□□□□ -1.17
PDLIM7-211ENST00000504318 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
PDLIM7-211ENST00000504318 C14orf132Q9NPU4 83 aa7.73□□□□□ -1.17
PDLIM7-211ENST00000504318 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
PDLIM7-211ENST00000504318 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
PDLIM7-211ENST00000504318 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
PDLIM7-211ENST00000504318 CCKP06307 115 aa7.69□□□□□ -1.18
PDLIM7-211ENST00000504318 DEFB105AQ8NG35 78 aa7.69□□□□□ -1.18
PDLIM7-211ENST00000504318 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
PDLIM7-211ENST00000504318 A0A1B0GV72 72 aa7.67□□□□□ -1.18
PDLIM7-211ENST00000504318 F8WEM9 126 aa7.66□□□□□ -1.18
PDLIM7-211ENST00000504318 CD164Q04900 197 aa7.66□□□□□ -1.18
PDLIM7-211ENST00000504318 Q6ZQT0 140 aa7.66□□□□□ -1.18
PDLIM7-211ENST00000504318 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.18
PDLIM7-211ENST00000504318 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
PDLIM7-211ENST00000504318 Q5XG85 94 aa7.65□□□□□ -1.18
PDLIM7-211ENST00000504318 HRCT1Q6UXD1 115 aa7.65□□□□□ -1.18
PDLIM7-211ENST00000504318 A0A0G2JQZ4 141 aa7.64□□□□□ -1.19
PDLIM7-211ENST00000504318 KRTAP19-2Q3LHN2 52 aa7.64□□□□□ -1.19
PDLIM7-211ENST00000504318 SIGMAR1Q99720 223 aa7.64□□□□□ -1.19
PDLIM7-211ENST00000504318 LIMD2Q9BT23 127 aa7.63□□□□□ -1.19
PDLIM7-211ENST00000504318 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
PDLIM7-211ENST00000504318 A0A1B0GW54 56 aa7.61□□□□□ -1.19
PDLIM7-211ENST00000504318 LINC00643Q86TS7 51 aa7.61□□□□□ -1.19
PDLIM7-211ENST00000504318 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
PDLIM7-211ENST00000504318 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
PDLIM7-211ENST00000504318 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
PDLIM7-211ENST00000504318 ATP5EP2Q5VTU8 51 aa7.57□□□□□ -1.2
PDLIM7-211ENST00000504318 Q6JHZ5 121 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms