RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
SSR3-209ENST00000498205 KCNQ1DNQ9H478 68 aa2.84□□□□□ -1.95
SSR3-209ENST00000498205 IGLV5-48A0A075B6I7 105 aa2.83□□□□□ -1.96
SSR3-209ENST00000498205 COX7BP24311 80 aa2.83□□□□□ -1.96
SSR3-209ENST00000498205 Q6ZQY7 126 aa2.83□□□□□ -1.96
SSR3-209ENST00000498205 C6orf48Q9UBA6 75 aa2.83□□□□□ -1.96
SSR3-209ENST00000498205 OTOGQ6ZRI0 2925 aa2.82□□□□□ -1.96
SSR3-209ENST00000498205 Q8NDZ9 215 aa2.82□□□□□ -1.96
SSR3-209ENST00000498205 DPH3Q96FX2 82 aa2.82□□□□□ -1.96
SSR3-209ENST00000498205 IGKV3D-7A0A0C4DH55 119 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 SPRR1AP35321 89 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
SSR3-209ENST00000498205 C15orf56Q8N910 161 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 CAMK2N2Q96S95 79 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 LAMTOR3Q9UHA4 124 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 F8P00451 2351 aa2.81□□□□□ -1.96
SSR3-209ENST00000498205 NBEAL1Q6ZS30 2694 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 IGLV10-54A0A075B6I4 117 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 A0A087WVE0 104 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 PRR3P79522 188 aaKnown RBP2.8□□□□□ -1.96
SSR3-209ENST00000498205 KPRPQ5T749 579 aaPredicted RBP2.8□□□□□ -1.96
SSR3-209ENST00000498205 CLPSL2Q6UWE3 100 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 RMI2Q96E14 147 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 STAB1Q9NY15 2570 aa2.8□□□□□ -1.96
SSR3-209ENST00000498205 NOTCH1P46531 2555 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 LCE6AA0A183 80 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 H7BZZ5 65 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 SYCNQ0VAF6 134 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 FAM19A1Q7Z5A9 133 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 PKIGQ9Y2B9 76 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 TENM3Q9P273 2699 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 STAB2Q8WWQ8 2551 aa2.79□□□□□ -1.96
SSR3-209ENST00000498205 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 FUSP35637 526 aaKnown RBP eCLIP2.78□□□□□ -1.96
SSR3-209ENST00000498205 C5orf47Q569G3 176 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 Q6ZRU5 148 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 Q6ZRX8 168 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 FAM19A5Q7Z5A7 132 aaPredicted RBP2.78□□□□□ -1.96
SSR3-209ENST00000498205 C3orf56Q8N813 242 aa2.78□□□□□ -1.96
SSR3-209ENST00000498205 TRRAPQ9Y4A5 3859 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 HAMPP81172 84 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 ESRGQ1W209 222 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 XAGE1AQ9HD64 81 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 MGAM2Q2M2H8 2515 aa2.77□□□□□ -1.97
SSR3-209ENST00000498205 CUBNO60494 3623 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 DNAH3Q8TD57 4116 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 IGLV1-50A0A075B6I6 118 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 DEFB131BA0A096LNP1 70 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 TRAV10A0A0B4J240 114 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 CNBPP62633 177 aaKnown RBP2.76□□□□□ -1.97
SSR3-209ENST00000498205 NREPQ16612 68 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 C20orf197Q8N268 126 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 COL6A5A8TX70 2615 aa2.76□□□□□ -1.97
SSR3-209ENST00000498205 SMIM26A0A096LP01 95 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 BPY2O14599 106 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 DEFB4AO15263 64 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 TMEM254Q8TBM7 123 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 TM2D3Q9BRN9 247 aa2.75□□□□□ -1.97
SSR3-209ENST00000498205 H3BPC8 53 aa2.74□□□□□ -1.97
SSR3-209ENST00000498205 M0R2N4 97 aa2.74□□□□□ -1.97
SSR3-209ENST00000498205 HTN3P15516 51 aa2.74□□□□□ -1.97
SSR3-209ENST00000498205 SPRR1BP22528 89 aa2.74□□□□□ -1.97
SSR3-209ENST00000498205 RPL37AP61513 92 aaKnown RBP2.74□□□□□ -1.97
SSR3-209ENST00000498205 SMR3AQ99954 134 aa2.74□□□□□ -1.97
SSR3-209ENST00000498205 PKD1L1Q8TDX9 2849 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 ETDCA0A1B0GVM5 59 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 C16orf90A8MZG2 172 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 NDUFB1O75438 58 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 Q5XG85 94 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
SSR3-209ENST00000498205 LINC00588Q9Y4M8 146 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 ANK2Q01484 3957 aa2.73□□□□□ -1.97
SSR3-209ENST00000498205 A0A1W2PNM2 257 aa2.72□□□□□ -1.97
SSR3-209ENST00000498205 OXTP01178 125 aa2.72□□□□□ -1.97
SSR3-209ENST00000498205 DEFB116Q30KQ4 102 aa2.72□□□□□ -1.97
SSR3-209ENST00000498205 C1orf137Q5JT78 98 aa2.72□□□□□ -1.97
SSR3-209ENST00000498205 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
SSR3-209ENST00000498205 Q9BRP9 147 aa2.72□□□□□ -1.97
SSR3-209ENST00000498205 F8WEM9 126 aa2.71□□□□□ -1.98
SSR3-209ENST00000498205 CYP4F30PQ9H0H9 118 aa2.71□□□□□ -1.98
SSR3-209ENST00000498205 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
SSR3-209ENST00000498205 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
SSR3-209ENST00000498205 SPANXA2-OT1Q8N9U9 137 aa2.7□□□□□ -1.98
SSR3-209ENST00000498205 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
SSR3-209ENST00000498205 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms