RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 M0R1W7 72 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 ROMO1P60602 79 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 DEFB113Q30KQ7 82 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 SPANXN1Q5VSR9 72 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 UBL5Q9BZL1 73 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 WNK1Q9H4A3 2382 aa2.43□□□□□ -2.02
SF3B1-212ENST00000496458 PKD1L1Q8TDX9 2849 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 TRAV22A0A0B4J277 110 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 H0YGX0 51 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
SF3B1-212ENST00000496458 Q8N814 137 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 TMEM254Q8TBM7 123 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 ZCCHC13Q8WW36 166 aaKnown RBP2.42□□□□□ -2.02
SF3B1-212ENST00000496458 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 LIMD2Q9BT23 127 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 C14orf132Q9NPU4 83 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 MGAM2Q2M2H8 2515 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
SF3B1-212ENST00000496458 ANK3Q12955 4377 aaKnown RBP2.41□□□□□ -2.02
SF3B1-212ENST00000496458 LYNX1G3V0Z9 82 aa2.41□□□□□ -2.02
SF3B1-212ENST00000496458 LYNX1P0DP58 116 aa2.41□□□□□ -2.02
SF3B1-212ENST00000496458 ENHOQ6UWT2 76 aa2.41□□□□□ -2.02
SF3B1-212ENST00000496458 MRPL36Q9P0J6 103 aaKnown RBP2.41□□□□□ -2.02
SF3B1-212ENST00000496458 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
SF3B1-212ENST00000496458 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
SF3B1-212ENST00000496458 FBN1P35555 2871 aaKnown RBP2.41□□□□□ -2.02
SF3B1-212ENST00000496458 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 ODF3BA8MYP8 253 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 B4DSR2 109 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 Q5VV11 94 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 SMR3AQ99954 134 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 VWFP04275 2813 aa2.4□□□□□ -2.03
SF3B1-212ENST00000496458 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 HRES1P13985 223 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 PDE6GP18545 87 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 ELOF1P60002 83 aaKnown RBP2.39□□□□□ -2.03
SF3B1-212ENST00000496458 NREPQ16612 68 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 C1orf134Q5TEV5 83 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 Q9BRP9 147 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 NDUFA4L2Q9NRX3 87 aa2.39□□□□□ -2.03
SF3B1-212ENST00000496458 IGLV10-54A0A075B6I4 117 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 TRAV12-3A0A0B4J271 114 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 LOC101927531A0A1B0GV80 90 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 HCG22E2RYF7 251 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 CRPP02741 224 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 CTSGP08311 255 aa2.38□□□□□ -2.03
SF3B1-212ENST00000496458 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-212ENST00000496458 LOC110117498A0A087WWA1 95 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 A0A096LNT2 108 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 TRAV10A0A0B4J240 114 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 LCE6AA0A183 80 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 A0A1W2PNN7 141 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 H3BRN7 92 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 NDUFA1O15239 70 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 DEFB108BQ8NET1 73 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 TMEM167AQ8TBQ9 72 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 LINC00308Q8TCZ7 52 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 ZNF625Q96I27 306 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-212ENST00000496458 ORMDL1Q9P0S3 153 aa2.37□□□□□ -2.03
SF3B1-212ENST00000496458 A0A087WSZ3 146 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 NDUFB1O75438 58 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 POLR2KP53803 58 aaKnown RBP2.36□□□□□ -2.03
SF3B1-212ENST00000496458 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 CDC42SE2Q9NRR3 84 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 LENEPQ9Y5L5 61 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 CUBNO60494 3623 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 TNCP24821 2201 aa2.36□□□□□ -2.03
SF3B1-212ENST00000496458 TGP01266 2768 aa2.35□□□□□ -2.03
SF3B1-212ENST00000496458 TFF1P04155 84 aa2.35□□□□□ -2.03
SF3B1-212ENST00000496458 SAA2P0DJI9 122 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-212ENST00000496458 DEFB114Q30KQ6 69 aa2.35□□□□□ -2.03
SF3B1-212ENST00000496458 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
SF3B1-212ENST00000496458 TRAV21A0A0B4J279 112 aa2.34□□□□□ -2.03
SF3B1-212ENST00000496458 NCR3O14931 201 aa2.34□□□□□ -2.03
SF3B1-212ENST00000496458 RPL39P5Q59GN2 51 aa2.34□□□□□ -2.03
SF3B1-212ENST00000496458 FAM74A4Q5TZK3 123 aa2.34□□□□□ -2.03
SF3B1-212ENST00000496458 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
SF3B1-212ENST00000496458 TRRAPQ9Y4A5 3859 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-212ENST00000496458 IGKV2-29A2NJV5 120 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-212ENST00000496458 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-212ENST00000496458 PRB3Q04118 309 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-212ENST00000496458 WT1-ASQ06250 92 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 CASC2Q6XLA1 102 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 Q6ZTI0 123 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 C9orf163Q8N9P6 203 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 GAFA1Q96PS6 74 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 KAAG1Q9UBP8 84 aa2.33□□□□□ -2.04
SF3B1-212ENST00000496458 SORL1Q92673 2214 aa2.32□□□□□ -2.04
SF3B1-212ENST00000496458 TRBV10-1A0A0K0K1A3 114 aa2.32□□□□□ -2.04
SF3B1-212ENST00000496458 RPL39LQ96EH5 51 aaKnown RBP2.32□□□□□ -2.04
SF3B1-212ENST00000496458 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
SF3B1-212ENST00000496458 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms