RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
VTI1A-208ENST00000494728 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
VTI1A-208ENST00000494728 A0A1B0GWB2 263 aa6.29□□□□□ -1.4
VTI1A-208ENST00000494728 CD164Q04900 197 aa6.29□□□□□ -1.4
VTI1A-208ENST00000494728 PRO1933Q9H354 126 aa6.29□□□□□ -1.4
VTI1A-208ENST00000494728 A6NDN8 102 aa6.28□□□□□ -1.4
VTI1A-208ENST00000494728 IFITM1P13164 125 aa6.28□□□□□ -1.4
VTI1A-208ENST00000494728 MT1HP80294 61 aa6.28□□□□□ -1.4
VTI1A-208ENST00000494728 COPS9Q8WXC6 57 aa6.28□□□□□ -1.4
VTI1A-208ENST00000494728 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
VTI1A-208ENST00000494728 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
VTI1A-208ENST00000494728 SMIM11BQ8TCY0 68 aa6.27□□□□□ -1.41
VTI1A-208ENST00000494728 Q5XG85 94 aa6.26□□□□□ -1.41
VTI1A-208ENST00000494728 Q6ZVH6 145 aa6.26□□□□□ -1.41
VTI1A-208ENST00000494728 PAM16Q9Y3D7 125 aa6.25□□□□□ -1.41
VTI1A-208ENST00000494728 SPATA45Q537H7 98 aa6.24□□□□□ -1.41
VTI1A-208ENST00000494728 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
VTI1A-208ENST00000494728 VAMP8Q9BV40 100 aa6.24□□□□□ -1.41
VTI1A-208ENST00000494728 COX8AP10176 69 aa6.23□□□□□ -1.41
VTI1A-208ENST00000494728 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
VTI1A-208ENST00000494728 C14orf144Q96I85 54 aa6.22□□□□□ -1.41
VTI1A-208ENST00000494728 TRAV13-2A0A0B4J235 113 aa6.21□□□□□ -1.42
VTI1A-208ENST00000494728 A4D1N5 150 aa6.21□□□□□ -1.42
VTI1A-208ENST00000494728 HIST1H4GQ99525 98 aa6.21□□□□□ -1.42
VTI1A-208ENST00000494728 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
VTI1A-208ENST00000494728 C12orf57Q99622 126 aa6.2□□□□□ -1.42
VTI1A-208ENST00000494728 DLEU1O43261 78 aa6.19□□□□□ -1.42
VTI1A-208ENST00000494728 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
VTI1A-208ENST00000494728 Q6ZQY7 126 aa6.19□□□□□ -1.42
VTI1A-208ENST00000494728 NHP2Q9NX24 153 aaKnown RBP6.19□□□□□ -1.42
VTI1A-208ENST00000494728 PYY3Q5JQD4 70 aa6.18□□□□□ -1.42
VTI1A-208ENST00000494728 KRTAP10-6P60371 365 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-208ENST00000494728 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
VTI1A-208ENST00000494728 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
VTI1A-208ENST00000494728 hADV29S1A0JD25 119 aa6.15□□□□□ -1.42
VTI1A-208ENST00000494728 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
VTI1A-208ENST00000494728 F8WEM9 126 aa6.14□□□□□ -1.43
VTI1A-208ENST00000494728 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
VTI1A-208ENST00000494728 HIGD1BQ9P298 99 aa6.14□□□□□ -1.43
VTI1A-208ENST00000494728 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
VTI1A-208ENST00000494728 TCL1BO95988 128 aa6.13□□□□□ -1.43
VTI1A-208ENST00000494728 VAMP3Q15836 100 aa6.12□□□□□ -1.43
VTI1A-208ENST00000494728 H3BUT2 72 aa6.11□□□□□ -1.43
VTI1A-208ENST00000494728 CFC1BP0CG36 223 aa6.11□□□□□ -1.43
VTI1A-208ENST00000494728 Q6JHZ5 121 aa6.11□□□□□ -1.43
VTI1A-208ENST00000494728 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
VTI1A-208ENST00000494728 CFC1P0CG37 223 aa6.1□□□□□ -1.43
VTI1A-208ENST00000494728 OCIAD2Q56VL3 154 aa6.1□□□□□ -1.43
VTI1A-208ENST00000494728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.1□□□□□ -1.43
VTI1A-208ENST00000494728 CEND1Q8N111 149 aa6.1□□□□□ -1.43
VTI1A-208ENST00000494728 OBSCN-AS1Q96MR7 158 aa6.09□□□□□ -1.43
VTI1A-208ENST00000494728 A0A0B4J2C4 111 aa6.08□□□□□ -1.44
VTI1A-208ENST00000494728 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
VTI1A-208ENST00000494728 FXYD2P54710 66 aa6.08□□□□□ -1.44
VTI1A-208ENST00000494728 FAM218AQ96MZ4 157 aa6.08□□□□□ -1.44
VTI1A-208ENST00000494728 COX6B2Q6YFQ2 88 aa6.07□□□□□ -1.44
VTI1A-208ENST00000494728 M0R2T5 61 aa6.06□□□□□ -1.44
VTI1A-208ENST00000494728 HSD52Q0P140 79 aa6.06□□□□□ -1.44
VTI1A-208ENST00000494728 BVES-AS1Q5T3Y7 98 aa6.06□□□□□ -1.44
VTI1A-208ENST00000494728 UQCR10Q9UDW1 63 aa6.06□□□□□ -1.44
VTI1A-208ENST00000494728 Q75L30 129 aa6.05□□□□□ -1.44
VTI1A-208ENST00000494728 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
VTI1A-208ENST00000494728 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
VTI1A-208ENST00000494728 SNHG12Q9BXW3 62 aa6.04□□□□□ -1.44
VTI1A-208ENST00000494728 PRO1854Q9UHT4 67 aa6.04□□□□□ -1.44
VTI1A-208ENST00000494728 K7ERJ3 54 aa6.03□□□□□ -1.44
VTI1A-208ENST00000494728 LST1O00453 97 aa6.02□□□□□ -1.45
VTI1A-208ENST00000494728 Q96NJ1 140 aa6.02□□□□□ -1.45
VTI1A-208ENST00000494728 GHRHP01286 108 aa6.01□□□□□ -1.45
VTI1A-208ENST00000494728 Q6Q795 121 aa6.01□□□□□ -1.45
VTI1A-208ENST00000494728 H0YGX0 51 aa6□□□□□ -1.45
VTI1A-208ENST00000494728 SMIM6P0DI80 62 aa6□□□□□ -1.45
VTI1A-208ENST00000494728 A0A087WSZ3 146 aa5.99□□□□□ -1.45
VTI1A-208ENST00000494728 TRIAP1O43715 76 aa5.99□□□□□ -1.45
VTI1A-208ENST00000494728 PSMB2P49721 201 aa5.99□□□□□ -1.45
VTI1A-208ENST00000494728 NDUFV3P56181 108 aaKnown RBP5.99□□□□□ -1.45
VTI1A-208ENST00000494728 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
VTI1A-208ENST00000494728 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
VTI1A-208ENST00000494728 SNCGO76070 127 aa5.98□□□□□ -1.45
VTI1A-208ENST00000494728 TEN1Q86WV5 123 aa5.98□□□□□ -1.45
VTI1A-208ENST00000494728 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
VTI1A-208ENST00000494728 A8MUU9 505 aa5.97□□□□□ -1.45
VTI1A-208ENST00000494728 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
VTI1A-208ENST00000494728 DSCR10P59022 87 aa5.96□□□□□ -1.46
VTI1A-208ENST00000494728 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
VTI1A-208ENST00000494728 A0A1B0GV72 72 aa5.94□□□□□ -1.46
VTI1A-208ENST00000494728 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
VTI1A-208ENST00000494728 H3BMG7 143 aa5.94□□□□□ -1.46
VTI1A-208ENST00000494728 USH2AO75445 5202 aa5.94□□□□□ -1.46
VTI1A-208ENST00000494728 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
VTI1A-208ENST00000494728 A0A1B0GX51 115 aa5.93□□□□□ -1.46
VTI1A-208ENST00000494728 COX6CP09669 75 aa5.93□□□□□ -1.46
VTI1A-208ENST00000494728 FABP2P12104 132 aa5.93□□□□□ -1.46
VTI1A-208ENST00000494728 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
VTI1A-208ENST00000494728 TSTD3H0UI37 97 aa5.92□□□□□ -1.46
VTI1A-208ENST00000494728 M0R143 59 aa5.92□□□□□ -1.46
VTI1A-208ENST00000494728 DNAL4O96015 105 aa5.92□□□□□ -1.46
VTI1A-208ENST00000494728 SIGMAR1Q99720 223 aa5.92□□□□□ -1.46
VTI1A-208ENST00000494728 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
VTI1A-208ENST00000494728 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms