RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 HECTD1Q9ULT8 2610 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 NRXN3Q9Y4C0 1643 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 VWFP04275 2813 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 NEBP20929 6669 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 DDX60Q8IY21 1712 aaKnown RBP0.58□□□□□ -2.32
LRIF1-203ENST00000494675 IGIPA6NJ69 53 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 SPRR1BP22528 89 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 TFF3Q07654 80 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 USMG5Q96IX5 58 aa0.58□□□□□ -2.32
LRIF1-203ENST00000494675 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
LRIF1-203ENST00000494675 LINC00158P58513 81 aa0.57□□□□□ -2.32
LRIF1-203ENST00000494675 NMES1Q9C002 83 aa0.57□□□□□ -2.32
LRIF1-203ENST00000494675 UBR5O95071 2799 aaPredicted RBP0.57□□□□□ -2.32
LRIF1-203ENST00000494675 TNRC18O15417 2968 aaPredicted RBP0.56□□□□□ -2.32
LRIF1-203ENST00000494675 IQGAP1P46940 1657 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 WFDC13Q8IUB5 93 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 SRRM2Q9UQ35 2752 aaKnown RBP0.56□□□□□ -2.32
LRIF1-203ENST00000494675 ALMS1Q8TCU4 4167 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 CMC2Q9NRP2 79 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 PKD1L2Q7Z442 2459 aa0.56□□□□□ -2.32
LRIF1-203ENST00000494675 ZZEF1O43149 2961 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 OTOGQ6ZRI0 2925 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 DEFB131BA0A096LNP1 70 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 COX6B1P14854 86 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 CDC42BPAQ5VT25 1732 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
LRIF1-203ENST00000494675 BSNQ9UPA5 3926 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 DEFB130BP0DP73 79 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 DEFB130AP0DP74 79 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 PLNP26678 52 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 UNC79Q9P2D8 2635 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 A0A0C4DFX4 3053 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 MINOS1Q5TGZ0 78 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 ABCC8Q09428 1581 aa0.54□□□□□ -2.32
LRIF1-203ENST00000494675 SPTBN5Q9NRC6 3674 aaKnown RBP0.53□□□□□ -2.32
LRIF1-203ENST00000494675 ADCY10Q96PN6 1610 aa0.53□□□□□ -2.32
LRIF1-203ENST00000494675 MRPL33O75394 65 aaKnown RBP0.53□□□□□ -2.32
LRIF1-203ENST00000494675 IAPPP10997 89 aa0.53□□□□□ -2.32
LRIF1-203ENST00000494675 DEFB114Q30KQ6 69 aa0.53□□□□□ -2.32
LRIF1-203ENST00000494675 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.32
LRIF1-203ENST00000494675 SMIM27A0A1W2PRY6 76 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 LINC00308Q8TCZ7 52 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 EP300Q09472 2414 aaPredicted RBP0.52□□□□□ -2.33
LRIF1-203ENST00000494675 PKD1L1Q8TDX9 2849 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 DEPDC5O75140 1603 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 FAM208AQ9UK61 1670 aaKnown RBP0.52□□□□□ -2.33
LRIF1-203ENST00000494675 PDZD2O15018 2839 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 CCL22O00626 93 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 SERF2P84101 59 aa0.52□□□□□ -2.33
LRIF1-203ENST00000494675 IQGAP2Q13576 1575 aa0.51□□□□□ -2.33
LRIF1-203ENST00000494675 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
LRIF1-203ENST00000494675 C6orf48Q9UBA6 75 aa0.51□□□□□ -2.33
LRIF1-203ENST00000494675 NFAT5O94916 1531 aa0.51□□□□□ -2.33
LRIF1-203ENST00000494675 LMO7Q8WWI1 1683 aa0.51□□□□□ -2.33
LRIF1-203ENST00000494675 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
LRIF1-203ENST00000494675 Q5VSD8 79 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 APC2O95996 2303 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 NF1P21359 2839 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 KIAA0586Q9BVV6 1533 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 KALRNO60229 2985 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 CUBNO60494 3623 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 FLNCQ14315 2725 aa0.5□□□□□ -2.33
LRIF1-203ENST00000494675 GCN1Q92616 2671 aaKnown RBP0.49□□□□□ -2.33
LRIF1-203ENST00000494675 DCHS2Q6V1P9 2916 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 H0YGX0 51 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 RPS27P42677 84 aaKnown RBP0.49□□□□□ -2.33
LRIF1-203ENST00000494675 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 COX6B2Q6YFQ2 88 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 RPS27LQ71UM5 84 aaKnown RBP0.49□□□□□ -2.33
LRIF1-203ENST00000494675 KAAG1Q9UBP8 84 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 ZFHX4Q86UP3 3567 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 RELNP78509 3460 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 CHD7Q9P2D1 2997 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 PTPN13Q12923 2485 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 HIVEP3Q5T1R4 2406 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 TENM4Q6N022 2769 aa0.49□□□□□ -2.33
LRIF1-203ENST00000494675 WFDC10BQ8IUB3 73 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 ACACAQ13085 2346 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 COL12A1Q99715 3063 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 SPG11Q96JI7 2443 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 KRTAP2-3P0C7H8 128 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 PRLHP81277 87 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 KRTAP2-4Q9BYR9 128 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 KRTAP2-1Q9BYU5 128 aa0.48□□□□□ -2.33
LRIF1-203ENST00000494675 NSD1Q96L73 2696 aaPredicted RBP0.47□□□□□ -2.33
LRIF1-203ENST00000494675 KIF21BO75037 1637 aa0.47□□□□□ -2.33
LRIF1-203ENST00000494675 CACNA1AO00555 2505 aa0.47□□□□□ -2.33
LRIF1-203ENST00000494675 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
LRIF1-203ENST00000494675 DEFB106AQ8N104 65 aa0.47□□□□□ -2.33
LRIF1-203ENST00000494675 DMBT1Q9UGM3 2413 aaPredicted RBP0.47□□□□□ -2.33
LRIF1-203ENST00000494675 RANBP2P49792 3224 aaKnown RBP0.47□□□□□ -2.33
LRIF1-203ENST00000494675 LYSTQ99698 3801 aa0.47□□□□□ -2.33
LRIF1-203ENST00000494675 TENM3Q9P273 2699 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms