RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZNF861PO60384 105 aa12.58□□□□□ -0.4
KPNA1-210ENST00000494339 SMR3BP02814 79 aaPredicted RBP12.57□□□□□ -0.4
KPNA1-210ENST00000494339 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
KPNA1-210ENST00000494339 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
KPNA1-210ENST00000494339 Q6ZQT0 140 aa12.55□□□□□ -0.4
KPNA1-210ENST00000494339 SIGMAR1Q99720 223 aa12.55□□□□□ -0.4
KPNA1-210ENST00000494339 SRRM2Q9UQ35 2752 aaKnown RBP12.55□□□□□ -0.4
KPNA1-210ENST00000494339 TRBV7-4A0A0J9YYF1 115 aa12.54□□□□□ -0.4
KPNA1-210ENST00000494339 C3orf22Q8N5N4 141 aa12.52□□□□□ -0.4
KPNA1-210ENST00000494339 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
KPNA1-210ENST00000494339 KIAA1109Q2LD37 5005 aa12.49□□□□□ -0.41
KPNA1-210ENST00000494339 VPS13BQ7Z7G8 4022 aa12.49□□□□□ -0.41
KPNA1-210ENST00000494339 SPRR4Q96PI1 79 aa12.46□□□□□ -0.42
KPNA1-210ENST00000494339 SPRR1BP22528 89 aa12.45□□□□□ -0.42
KPNA1-210ENST00000494339 SMIM29Q86T20 159 aa12.45□□□□□ -0.42
KPNA1-210ENST00000494339 LINC00846Q9NV44 126 aa12.45□□□□□ -0.42
KPNA1-210ENST00000494339 MT-ATP8P03928 68 aa12.45□□□□□ -0.42
KPNA1-210ENST00000494339 F8WEM9 126 aa12.44□□□□□ -0.42
KPNA1-210ENST00000494339 LINC00643Q86TS7 51 aa12.44□□□□□ -0.42
KPNA1-210ENST00000494339 ZNF706Q9Y5V0 76 aaPredicted RBP12.44□□□□□ -0.42
KPNA1-210ENST00000494339 CDK2AP2O75956 126 aa12.43□□□□□ -0.42
KPNA1-210ENST00000494339 HSPG2P98160 4391 aa12.43□□□□□ -0.42
KPNA1-210ENST00000494339 BIRC6Q9NR09 4857 aa12.42□□□□□ -0.42
KPNA1-210ENST00000494339 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
KPNA1-210ENST00000494339 RYR1P21817 5038 aa12.4□□□□□ -0.42
KPNA1-210ENST00000494339 ANAPC11Q9NYG5 84 aa12.4□□□□□ -0.42
KPNA1-210ENST00000494339 FAT1Q14517 4588 aa12.39□□□□□ -0.43
KPNA1-210ENST00000494339 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
KPNA1-210ENST00000494339 LINC00483Q53H64 154 aa12.38□□□□□ -0.43
KPNA1-210ENST00000494339 UBL5Q9BZL1 73 aa12.37□□□□□ -0.43
KPNA1-210ENST00000494339 A0A1B0GW54 56 aa12.37□□□□□ -0.43
KPNA1-210ENST00000494339 KRTAP10-4P60372 401 aaPredicted RBP12.35□□□□□ -0.43
KPNA1-210ENST00000494339 IGLV9-49A0A0B4J1Y8 123 aa12.33□□□□□ -0.44
KPNA1-210ENST00000494339 SCGB1A1P11684 91 aa12.32□□□□□ -0.44
KPNA1-210ENST00000494339 Q6JHZ5 121 aa12.32□□□□□ -0.44
KPNA1-210ENST00000494339 SPINK6Q6UWN8 80 aa12.32□□□□□ -0.44
KPNA1-210ENST00000494339 TRBV7-7A0A0K0K1E9 115 aa12.31□□□□□ -0.44
KPNA1-210ENST00000494339 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
KPNA1-210ENST00000494339 Q6Q795 121 aa12.31□□□□□ -0.44
KPNA1-210ENST00000494339 Q8NBF4 154 aa12.31□□□□□ -0.44
KPNA1-210ENST00000494339 IMUPQ9GZP8 106 aa12.31□□□□□ -0.44
KPNA1-210ENST00000494339 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
KPNA1-210ENST00000494339 A0A1W2PNM2 257 aa12.29□□□□□ -0.44
KPNA1-210ENST00000494339 ATP5EP2Q5VTU8 51 aa12.29□□□□□ -0.44
KPNA1-210ENST00000494339 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
KPNA1-210ENST00000494339 C9orf153Q5TBE3 101 aa12.29□□□□□ -0.44
KPNA1-210ENST00000494339 IGFL1Q6UW32 110 aa12.29□□□□□ -0.44
KPNA1-210ENST00000494339 Q5VSD8 79 aa12.27□□□□□ -0.44
KPNA1-210ENST00000494339 Q6ZVQ6 151 aa12.27□□□□□ -0.44
KPNA1-210ENST00000494339 KRTAP1-4P0C5Y4 121 aa12.26□□□□□ -0.45
KPNA1-210ENST00000494339 MOBPQ13875 183 aa12.25□□□□□ -0.45
KPNA1-210ENST00000494339 CRYGAP11844 174 aa12.25□□□□□ -0.45
KPNA1-210ENST00000494339 A0A087X002 238 aa12.23□□□□□ -0.45
KPNA1-210ENST00000494339 IGKV3D-7A0A0C4DH55 119 aa12.22□□□□□ -0.45
KPNA1-210ENST00000494339 NREPQ16612 68 aa12.21□□□□□ -0.45
KPNA1-210ENST00000494339 FAM229BQ4G0N7 80 aa12.2□□□□□ -0.46
KPNA1-210ENST00000494339 CXCL6P80162 114 aa12.18□□□□□ -0.46
KPNA1-210ENST00000494339 HERC2O95714 4834 aa12.18□□□□□ -0.46
KPNA1-210ENST00000494339 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
KPNA1-210ENST00000494339 Q8N1X5 172 aa12.16□□□□□ -0.46
KPNA1-210ENST00000494339 PCP4P48539 62 aa12.14□□□□□ -0.47
KPNA1-210ENST00000494339 HRCT1Q6UXD1 115 aa12.12□□□□□ -0.47
KPNA1-210ENST00000494339 KRTAP4-5Q9BYR2 181 aa12.12□□□□□ -0.47
KPNA1-210ENST00000494339 SSBP3-AS1Q7Z2R9 100 aa12.11□□□□□ -0.47
KPNA1-210ENST00000494339 PRR26Q8N8Z3 221 aa12.11□□□□□ -0.47
KPNA1-210ENST00000494339 A0A087WSZ3 146 aa12.1□□□□□ -0.47
KPNA1-210ENST00000494339 HIST1H4AP62805 103 aaKnown RBP12.1□□□□□ -0.47
KPNA1-210ENST00000494339 BPY2O14599 106 aa12.09□□□□□ -0.47
KPNA1-210ENST00000494339 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
KPNA1-210ENST00000494339 FAM236AA0A1B0GUQ0 79 aa12.06□□□□□ -0.48
KPNA1-210ENST00000494339 FAM236BA0A1B0GV22 79 aa12.06□□□□□ -0.48
KPNA1-210ENST00000494339 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
KPNA1-210ENST00000494339 ABCA13Q86UQ4 5058 aa12.04□□□□□ -0.48
KPNA1-210ENST00000494339 A0A087WVE0 104 aa12.03□□□□□ -0.48
KPNA1-210ENST00000494339 SS18L2Q9UHA2 77 aa11.99□□□□□ -0.49
KPNA1-210ENST00000494339 FLG2Q5D862 2391 aaPredicted RBP11.98□□□□□ -0.49
KPNA1-210ENST00000494339 CD164Q04900 197 aa11.98□□□□□ -0.49
KPNA1-210ENST00000494339 ANAPC13Q9BS18 74 aa11.98□□□□□ -0.49
KPNA1-210ENST00000494339 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
KPNA1-210ENST00000494339 DSCR10P59022 87 aa11.94□□□□□ -0.5
KPNA1-210ENST00000494339 LINC00472Q9H8W2 130 aa11.94□□□□□ -0.5
KPNA1-210ENST00000494339 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
KPNA1-210ENST00000494339 ATOX1O00244 68 aa11.94□□□□□ -0.5
KPNA1-210ENST00000494339 LRP1Q07954 4544 aaKnown RBP11.93□□□□□ -0.5
KPNA1-210ENST00000494339 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
KPNA1-210ENST00000494339 Q8N9L7 120 aa11.93□□□□□ -0.5
KPNA1-210ENST00000494339 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
KPNA1-210ENST00000494339 DEFB116Q30KQ4 102 aa11.91□□□□□ -0.5
KPNA1-210ENST00000494339 J3KT08 172 aa11.9□□□□□ -0.5
KPNA1-210ENST00000494339 K7EQZ3 153 aa11.87□□□□□ -0.51
KPNA1-210ENST00000494339 SPINK1P00995 79 aa11.86□□□□□ -0.51
KPNA1-210ENST00000494339 PCLOQ9Y6V0 5065 aa11.85□□□□□ -0.51
KPNA1-210ENST00000494339 Q96NJ1 140 aa11.85□□□□□ -0.51
KPNA1-210ENST00000494339 KRTAP10-8P60410 259 aa11.84□□□□□ -0.51
KPNA1-210ENST00000494339 SPAG11AQ6PDA7 123 aa11.84□□□□□ -0.51
KPNA1-210ENST00000494339 A8MWP4 228 aa11.84□□□□□ -0.51
KPNA1-210ENST00000494339 FAT3Q8TDW7 4589 aa11.82□□□□□ -0.52
KPNA1-210ENST00000494339 LIMD2Q9BT23 127 aa11.82□□□□□ -0.52
KPNA1-210ENST00000494339 ASB16-AS1Q495Z4 193 aa11.81□□□□□ -0.52
KPNA1-210ENST00000494339 Q5XG85 94 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms