RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 C20orf197Q8N268 126 aa7□□□□□ -1.29
PDLIM1-205ENST00000493949 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
PDLIM1-205ENST00000493949 COX7BP24311 80 aa6.99□□□□□ -1.29
PDLIM1-205ENST00000493949 ELOF1P60002 83 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-205ENST00000493949 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
PDLIM1-205ENST00000493949 HTN3P15516 51 aa6.98□□□□□ -1.29
PDLIM1-205ENST00000493949 Q5XG85 94 aa6.98□□□□□ -1.29
PDLIM1-205ENST00000493949 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
PDLIM1-205ENST00000493949 FUSP35637 526 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDLIM1-205ENST00000493949 Q6ZQY7 126 aa6.97□□□□□ -1.29
PDLIM1-205ENST00000493949 H3BNG1 76 aa6.96□□□□□ -1.3
PDLIM1-205ENST00000493949 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-205ENST00000493949 DAD1P61803 113 aa6.96□□□□□ -1.3
PDLIM1-205ENST00000493949 M0R378 163 aa6.95□□□□□ -1.3
PDLIM1-205ENST00000493949 HAMPP81172 84 aa6.95□□□□□ -1.3
PDLIM1-205ENST00000493949 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
PDLIM1-205ENST00000493949 OXTP01178 125 aa6.94□□□□□ -1.3
PDLIM1-205ENST00000493949 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
PDLIM1-205ENST00000493949 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
PDLIM1-205ENST00000493949 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
PDLIM1-205ENST00000493949 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
PDLIM1-205ENST00000493949 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
PDLIM1-205ENST00000493949 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
PDLIM1-205ENST00000493949 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
PDLIM1-205ENST00000493949 Q8NDZ9 215 aa6.92□□□□□ -1.3
PDLIM1-205ENST00000493949 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
PDLIM1-205ENST00000493949 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 VPREB1P12018 145 aa6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 NREPQ16612 68 aa6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
PDLIM1-205ENST00000493949 LINC00588Q9Y4M8 146 aa6.9□□□□□ -1.3
PDLIM1-205ENST00000493949 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.31
PDLIM1-205ENST00000493949 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
PDLIM1-205ENST00000493949 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
PDLIM1-205ENST00000493949 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
PDLIM1-205ENST00000493949 F8WEM9 126 aa6.88□□□□□ -1.31
PDLIM1-205ENST00000493949 BPY2O14599 106 aa6.88□□□□□ -1.31
PDLIM1-205ENST00000493949 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
PDLIM1-205ENST00000493949 TMEM254Q8TBM7 123 aa6.88□□□□□ -1.31
PDLIM1-205ENST00000493949 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
PDLIM1-205ENST00000493949 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
PDLIM1-205ENST00000493949 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
PDLIM1-205ENST00000493949 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
PDLIM1-205ENST00000493949 A0A096LPF7 62 aa6.86□□□□□ -1.31
PDLIM1-205ENST00000493949 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
PDLIM1-205ENST00000493949 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
PDLIM1-205ENST00000493949 KLK12Q9UKR0 248 aa6.86□□□□□ -1.31
PDLIM1-205ENST00000493949 PRYO14603 147 aa6.85□□□□□ -1.31
PDLIM1-205ENST00000493949 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
PDLIM1-205ENST00000493949 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
PDLIM1-205ENST00000493949 KCNQ1DNQ9H478 68 aa6.85□□□□□ -1.31
PDLIM1-205ENST00000493949 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.31
PDLIM1-205ENST00000493949 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
PDLIM1-205ENST00000493949 TLX1NBP0CAT3 122 aa6.84□□□□□ -1.31
PDLIM1-205ENST00000493949 LRP2P98164 4655 aa6.84□□□□□ -1.31
PDLIM1-205ENST00000493949 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
PDLIM1-205ENST00000493949 RMI2Q96E14 147 aa6.83□□□□□ -1.32
PDLIM1-205ENST00000493949 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
PDLIM1-205ENST00000493949 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-205ENST00000493949 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
PDLIM1-205ENST00000493949 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
PDLIM1-205ENST00000493949 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
PDLIM1-205ENST00000493949 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
PDLIM1-205ENST00000493949 A0A087WTM6 91 aa6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 DNAH10OSP0CZ25 163 aa6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 ESRGQ1W209 222 aa6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 LINC01556Q5JQF7 62 aa6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
PDLIM1-205ENST00000493949 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
PDLIM1-205ENST00000493949 Q6ZRU5 148 aa6.78□□□□□ -1.32
PDLIM1-205ENST00000493949 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
PDLIM1-205ENST00000493949 SPRR1AP35321 89 aa6.77□□□□□ -1.33
PDLIM1-205ENST00000493949 Q6ZRX8 168 aa6.77□□□□□ -1.33
PDLIM1-205ENST00000493949 Q8NBF4 154 aa6.77□□□□□ -1.33
PDLIM1-205ENST00000493949 NDUFB1O75438 58 aa6.76□□□□□ -1.33
PDLIM1-205ENST00000493949 TNXBP22105 4242 aa6.75□□□□□ -1.33
PDLIM1-205ENST00000493949 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
PDLIM1-205ENST00000493949 Q8N377 158 aa6.74□□□□□ -1.33
PDLIM1-205ENST00000493949 RPL37AP8A6NKH3 93 aa6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 Q6ZRP5 223 aa6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
PDLIM1-205ENST00000493949 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 H3BPC8 53 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 C1orf137Q5JT78 98 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 WFDC10BQ8IUB3 73 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 C7orf33Q8WU49 177 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 V9GYY9 64 aa6.72□□□□□ -1.33
PDLIM1-205ENST00000493949 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
PDLIM1-205ENST00000493949 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-205ENST00000493949 Q1T7F1 81 aa6.7□□□□□ -1.34
PDLIM1-205ENST00000493949 Q6ZSA8 131 aa6.7□□□□□ -1.34
PDLIM1-205ENST00000493949 IGLV5-52A0A0A0MRZ9 124 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms