RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TRBV7-6A0A0J9YX20 115 aa7.39□□□□□ -1.23
UPF3A-210ENST00000493727 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
UPF3A-210ENST00000493727 ELOF1P60002 83 aaKnown RBP7.39□□□□□ -1.23
UPF3A-210ENST00000493727 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
UPF3A-210ENST00000493727 H3BUT2 72 aa7.38□□□□□ -1.23
UPF3A-210ENST00000493727 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
UPF3A-210ENST00000493727 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
UPF3A-210ENST00000493727 Q6ZRX8 168 aa7.38□□□□□ -1.23
UPF3A-210ENST00000493727 HIGD2AQ9BW72 106 aa7.38□□□□□ -1.23
UPF3A-210ENST00000493727 H0YGX0 51 aa7.37□□□□□ -1.23
UPF3A-210ENST00000493727 SLC25A20O43772 301 aa7.37□□□□□ -1.23
UPF3A-210ENST00000493727 ZNF861PO60384 105 aa7.36□□□□□ -1.23
UPF3A-210ENST00000493727 SNCGO76070 127 aa7.36□□□□□ -1.23
UPF3A-210ENST00000493727 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
UPF3A-210ENST00000493727 H0Y9J4 135 aa7.35□□□□□ -1.23
UPF3A-210ENST00000493727 FABP2P12104 132 aa7.34□□□□□ -1.23
UPF3A-210ENST00000493727 KRTAP13-1Q8IUC0 172 aa7.34□□□□□ -1.23
UPF3A-210ENST00000493727 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
UPF3A-210ENST00000493727 A0A1W2PPM0 123 aa7.33□□□□□ -1.24
UPF3A-210ENST00000493727 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
UPF3A-210ENST00000493727 Q9BRP9 147 aa7.33□□□□□ -1.24
UPF3A-210ENST00000493727 hADV29S1A0JD25 119 aa7.32□□□□□ -1.24
UPF3A-210ENST00000493727 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
UPF3A-210ENST00000493727 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
UPF3A-210ENST00000493727 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
UPF3A-210ENST00000493727 DNAL4O96015 105 aa7.31□□□□□ -1.24
UPF3A-210ENST00000493727 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
UPF3A-210ENST00000493727 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
UPF3A-210ENST00000493727 A0A1B0GX51 115 aa7.3□□□□□ -1.24
UPF3A-210ENST00000493727 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
UPF3A-210ENST00000493727 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
UPF3A-210ENST00000493727 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
UPF3A-210ENST00000493727 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
UPF3A-210ENST00000493727 MUC2Q02817 5179 aa7.3□□□□□ -1.24
UPF3A-210ENST00000493727 LST1O00453 97 aa7.29□□□□□ -1.24
UPF3A-210ENST00000493727 IGKV2-30P06310 120 aa7.29□□□□□ -1.24
UPF3A-210ENST00000493727 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
UPF3A-210ENST00000493727 TRBV20-1A0A075B6N2 111 aa7.28□□□□□ -1.24
UPF3A-210ENST00000493727 TCL1BO95988 128 aa7.28□□□□□ -1.24
UPF3A-210ENST00000493727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.27□□□□□ -1.25
UPF3A-210ENST00000493727 Q6ZQY7 126 aa7.27□□□□□ -1.25
UPF3A-210ENST00000493727 ST20-AS1Q8NBB2 130 aa7.27□□□□□ -1.25
UPF3A-210ENST00000493727 TRACP01848 142 aa7.26□□□□□ -1.25
UPF3A-210ENST00000493727 GAGE2AQ6NT46 116 aa7.26□□□□□ -1.25
UPF3A-210ENST00000493727 DEFB105AQ8NG35 78 aa7.26□□□□□ -1.25
UPF3A-210ENST00000493727 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
UPF3A-210ENST00000493727 GTF2H5Q6ZYL4 71 aa7.24□□□□□ -1.25
UPF3A-210ENST00000493727 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
UPF3A-210ENST00000493727 K7EP34 96 aa7.23□□□□□ -1.25
UPF3A-210ENST00000493727 PCP4P48539 62 aa7.23□□□□□ -1.25
UPF3A-210ENST00000493727 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
UPF3A-210ENST00000493727 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
UPF3A-210ENST00000493727 H3BMG7 143 aa7.22□□□□□ -1.25
UPF3A-210ENST00000493727 C9JAW5 83 aa7.21□□□□□ -1.26
UPF3A-210ENST00000493727 H3BQ85 93 aa7.21□□□□□ -1.26
UPF3A-210ENST00000493727 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
UPF3A-210ENST00000493727 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
UPF3A-210ENST00000493727 ANAPC11Q9NYG5 84 aa7.2□□□□□ -1.26
UPF3A-210ENST00000493727 A0A1B0GV90 55 aa7.19□□□□□ -1.26
UPF3A-210ENST00000493727 F8WEM9 126 aa7.19□□□□□ -1.26
UPF3A-210ENST00000493727 LINC01547P58512 204 aaPredicted RBP7.19□□□□□ -1.26
UPF3A-210ENST00000493727 LINC00483Q53H64 154 aa7.19□□□□□ -1.26
UPF3A-210ENST00000493727 Q8N377 158 aa7.19□□□□□ -1.26
UPF3A-210ENST00000493727 LAMTOR3Q9UHA4 124 aa7.19□□□□□ -1.26
UPF3A-210ENST00000493727 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
UPF3A-210ENST00000493727 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
UPF3A-210ENST00000493727 SPRR1BP22528 89 aa7.18□□□□□ -1.26
UPF3A-210ENST00000493727 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
UPF3A-210ENST00000493727 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
UPF3A-210ENST00000493727 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
UPF3A-210ENST00000493727 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
UPF3A-210ENST00000493727 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
UPF3A-210ENST00000493727 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
UPF3A-210ENST00000493727 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
UPF3A-210ENST00000493727 CRYGAP11844 174 aa7.16□□□□□ -1.26
UPF3A-210ENST00000493727 C3orf22Q8N5N4 141 aa7.16□□□□□ -1.26
UPF3A-210ENST00000493727 H3BT86 120 aa7.15□□□□□ -1.26
UPF3A-210ENST00000493727 LCE1AQ5T7P2 110 aa7.15□□□□□ -1.26
UPF3A-210ENST00000493727 A0A1B0GV72 72 aa7.14□□□□□ -1.27
UPF3A-210ENST00000493727 ANKRD29Q8N6D5 301 aa7.14□□□□□ -1.27
UPF3A-210ENST00000493727 NDUFV3P56181 108 aaKnown RBP7.13□□□□□ -1.27
UPF3A-210ENST00000493727 UBE2V1Q13404 147 aa7.13□□□□□ -1.27
UPF3A-210ENST00000493727 MOBPQ13875 183 aa7.13□□□□□ -1.27
UPF3A-210ENST00000493727 SMIM29Q86T20 159 aa7.13□□□□□ -1.27
UPF3A-210ENST00000493727 A0A087X002 238 aa7.12□□□□□ -1.27
UPF3A-210ENST00000493727 Q8NBF4 154 aa7.12□□□□□ -1.27
UPF3A-210ENST00000493727 TYMSOSQ8TAI1 123 aa7.11□□□□□ -1.27
UPF3A-210ENST00000493727 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
UPF3A-210ENST00000493727 F8W1H4 67 aa7.09□□□□□ -1.27
UPF3A-210ENST00000493727 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
UPF3A-210ENST00000493727 JMJD7-PLA2G4BH0Y9G9 81 aa7.08□□□□□ -1.28
UPF3A-210ENST00000493727 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
UPF3A-210ENST00000493727 Q6JHZ5 121 aa7.07□□□□□ -1.28
UPF3A-210ENST00000493727 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
UPF3A-210ENST00000493727 A0A0A0MQY5 61 aa7.06□□□□□ -1.28
UPF3A-210ENST00000493727 PRR4Q16378 134 aa7.06□□□□□ -1.28
UPF3A-210ENST00000493727 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
UPF3A-210ENST00000493727 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
UPF3A-210ENST00000493727 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
UPF3A-210ENST00000493727 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms