RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 Q96NJ1 140 aa6.95□□□□□ -1.3
SAMM50-204ENST00000493161 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
SAMM50-204ENST00000493161 IFITM1P13164 125 aa6.94□□□□□ -1.3
SAMM50-204ENST00000493161 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
SAMM50-204ENST00000493161 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
SAMM50-204ENST00000493161 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
SAMM50-204ENST00000493161 MT1FP04733 61 aa6.92□□□□□ -1.3
SAMM50-204ENST00000493161 Q6JHZ5 121 aa6.92□□□□□ -1.3
SAMM50-204ENST00000493161 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
SAMM50-204ENST00000493161 Q6ZQY7 126 aa6.92□□□□□ -1.3
SAMM50-204ENST00000493161 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
SAMM50-204ENST00000493161 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BKO60814 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BJP06899 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BOP23527 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 OCIAD2Q56VL3 154 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
SAMM50-204ENST00000493161 SLC7A5P1Q8MH63 180 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 COPS9Q8WXC6 57 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
SAMM50-204ENST00000493161 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.3
SAMM50-204ENST00000493161 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
SAMM50-204ENST00000493161 A8MUU9 505 aa6.89□□□□□ -1.31
SAMM50-204ENST00000493161 Q6ZVH6 145 aa6.89□□□□□ -1.31
SAMM50-204ENST00000493161 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
SAMM50-204ENST00000493161 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
SAMM50-204ENST00000493161 LST1O00453 97 aa6.88□□□□□ -1.31
SAMM50-204ENST00000493161 KRTDAPP60985 99 aa6.88□□□□□ -1.31
SAMM50-204ENST00000493161 ATOH7Q8N100 152 aa6.88□□□□□ -1.31
SAMM50-204ENST00000493161 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
SAMM50-204ENST00000493161 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
SAMM50-204ENST00000493161 H3BUT2 72 aa6.87□□□□□ -1.31
SAMM50-204ENST00000493161 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
SAMM50-204ENST00000493161 VAMP3Q15836 100 aa6.86□□□□□ -1.31
SAMM50-204ENST00000493161 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SAMM50-204ENST00000493161 DSCR10P59022 87 aa6.81□□□□□ -1.32
SAMM50-204ENST00000493161 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
SAMM50-204ENST00000493161 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
SAMM50-204ENST00000493161 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
SAMM50-204ENST00000493161 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
SAMM50-204ENST00000493161 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
SAMM50-204ENST00000493161 HRES1P13985 223 aa6.77□□□□□ -1.33
SAMM50-204ENST00000493161 PPDPFLQ8WWR9 84 aa6.77□□□□□ -1.33
SAMM50-204ENST00000493161 SS18L2Q9UHA2 77 aa6.77□□□□□ -1.33
SAMM50-204ENST00000493161 A0A087WSZ3 146 aa6.76□□□□□ -1.33
SAMM50-204ENST00000493161 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
SAMM50-204ENST00000493161 C12orf57Q99622 126 aa6.76□□□□□ -1.33
SAMM50-204ENST00000493161 SCGB1D1O95968 90 aa6.74□□□□□ -1.33
SAMM50-204ENST00000493161 TEN1Q86WV5 123 aa6.74□□□□□ -1.33
SAMM50-204ENST00000493161 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
SAMM50-204ENST00000493161 BVES-AS1Q5T3Y7 98 aa6.72□□□□□ -1.33
SAMM50-204ENST00000493161 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
SAMM50-204ENST00000493161 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.34
SAMM50-204ENST00000493161 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
SAMM50-204ENST00000493161 SIGMAR1Q99720 223 aa6.7□□□□□ -1.34
SAMM50-204ENST00000493161 LINC00313P59037 77 aa6.69□□□□□ -1.34
SAMM50-204ENST00000493161 SNRPEP62304 92 aaKnown RBP6.68□□□□□ -1.34
SAMM50-204ENST00000493161 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
SAMM50-204ENST00000493161 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
SAMM50-204ENST00000493161 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
SAMM50-204ENST00000493161 H3BMG7 143 aa6.65□□□□□ -1.34
SAMM50-204ENST00000493161 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
SAMM50-204ENST00000493161 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
SAMM50-204ENST00000493161 LINC00846Q9NV44 126 aa6.64□□□□□ -1.35
SAMM50-204ENST00000493161 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
SAMM50-204ENST00000493161 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
SAMM50-204ENST00000493161 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
SAMM50-204ENST00000493161 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
SAMM50-204ENST00000493161 FABP2P12104 132 aa6.6□□□□□ -1.35
SAMM50-204ENST00000493161 H0YGX0 51 aa6.59□□□□□ -1.35
SAMM50-204ENST00000493161 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SAMM50-204ENST00000493161 HIST1H2BLQ99880 126 aa6.58□□□□□ -1.36
SAMM50-204ENST00000493161 A0A1B0GV72 72 aa6.57□□□□□ -1.36
SAMM50-204ENST00000493161 SNCGO76070 127 aa6.57□□□□□ -1.36
SAMM50-204ENST00000493161 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
SAMM50-204ENST00000493161 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
SAMM50-204ENST00000493161 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
SAMM50-204ENST00000493161 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
SAMM50-204ENST00000493161 TRBV7-4A0A0J9YYF1 115 aa6.55□□□□□ -1.36
SAMM50-204ENST00000493161 MTURNQ8N3F0 131 aa6.55□□□□□ -1.36
SAMM50-204ENST00000493161 SPINK7P58062 85 aa6.54□□□□□ -1.36
SAMM50-204ENST00000493161 ANKRD29Q8N6D5 301 aa6.54□□□□□ -1.36
SAMM50-204ENST00000493161 COX8AP10176 69 aa6.53□□□□□ -1.36
SAMM50-204ENST00000493161 A0A0B4J2C4 111 aa6.52□□□□□ -1.37
SAMM50-204ENST00000493161 A8MWP4 228 aa6.52□□□□□ -1.37
SAMM50-204ENST00000493161 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
SAMM50-204ENST00000493161 A0A1B0GX51 115 aa6.51□□□□□ -1.37
SAMM50-204ENST00000493161 S100A2P29034 98 aa6.51□□□□□ -1.37
SAMM50-204ENST00000493161 NEBP20929 6669 aa6.49□□□□□ -1.37
SAMM50-204ENST00000493161 A0A1B0GVX0 72 aa6.48□□□□□ -1.37
SAMM50-204ENST00000493161 DLEU1O43261 78 aa6.48□□□□□ -1.37
SAMM50-204ENST00000493161 TRIAP1O43715 76 aa6.48□□□□□ -1.37
SAMM50-204ENST00000493161 CCKP06307 115 aa6.48□□□□□ -1.37
SAMM50-204ENST00000493161 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms