RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
SS18L1-205ENST00000492466 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
SS18L1-205ENST00000492466 PRO1933Q9H354 126 aa8.36□□□□□ -1.07
SS18L1-205ENST00000492466 PRO1854Q9UHT4 67 aa8.36□□□□□ -1.07
SS18L1-205ENST00000492466 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
SS18L1-205ENST00000492466 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
SS18L1-205ENST00000492466 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
SS18L1-205ENST00000492466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.33□□□□□ -1.08
SS18L1-205ENST00000492466 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
SS18L1-205ENST00000492466 Q8N377 158 aa8.33□□□□□ -1.08
SS18L1-205ENST00000492466 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
SS18L1-205ENST00000492466 H0YGX0 51 aa8.32□□□□□ -1.08
SS18L1-205ENST00000492466 PSMB2P49721 201 aa8.32□□□□□ -1.08
SS18L1-205ENST00000492466 K7ERJ3 54 aa8.31□□□□□ -1.08
SS18L1-205ENST00000492466 SMIM29Q86T20 159 aa8.31□□□□□ -1.08
SS18L1-205ENST00000492466 SMIM6P0DI80 62 aa8.3□□□□□ -1.08
SS18L1-205ENST00000492466 SNHG12Q9BXW3 62 aa8.3□□□□□ -1.08
SS18L1-205ENST00000492466 TRIAP1O43715 76 aa8.28□□□□□ -1.08
SS18L1-205ENST00000492466 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
SS18L1-205ENST00000492466 COX6CP09669 75 aa8.27□□□□□ -1.09
SS18L1-205ENST00000492466 CD164Q04900 197 aa8.27□□□□□ -1.09
SS18L1-205ENST00000492466 OCIAD2Q56VL3 154 aa8.27□□□□□ -1.09
SS18L1-205ENST00000492466 DNAL4O96015 105 aa8.26□□□□□ -1.09
SS18L1-205ENST00000492466 A0A0G2JQZ4 141 aa8.25□□□□□ -1.09
SS18L1-205ENST00000492466 GHRHP01286 108 aa8.25□□□□□ -1.09
SS18L1-205ENST00000492466 Q6JHZ5 121 aa8.25□□□□□ -1.09
SS18L1-205ENST00000492466 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
SS18L1-205ENST00000492466 CLEC2BQ92478 149 aa8.24□□□□□ -1.09
SS18L1-205ENST00000492466 A0A1B0GX51 115 aa8.23□□□□□ -1.09
SS18L1-205ENST00000492466 M0R143 59 aa8.23□□□□□ -1.09
SS18L1-205ENST00000492466 TSTD3H0UI37 97 aa8.22□□□□□ -1.09
SS18L1-205ENST00000492466 FABP2P12104 132 aa8.22□□□□□ -1.09
SS18L1-205ENST00000492466 LOC105371267A0A1B0GV96 52 aa8.21□□□□□ -1.1
SS18L1-205ENST00000492466 H3BUT2 72 aa8.21□□□□□ -1.1
SS18L1-205ENST00000492466 TCL1BO95988 128 aa8.21□□□□□ -1.1
SS18L1-205ENST00000492466 SCGB1C2P0DMR2 95 aa8.2□□□□□ -1.1
SS18L1-205ENST00000492466 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
SS18L1-205ENST00000492466 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
SS18L1-205ENST00000492466 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
SS18L1-205ENST00000492466 NDUFV3P56181 108 aaKnown RBP8.18□□□□□ -1.1
SS18L1-205ENST00000492466 ORMDL1Q9P0S3 153 aa8.18□□□□□ -1.1
SS18L1-205ENST00000492466 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
SS18L1-205ENST00000492466 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
SS18L1-205ENST00000492466 A0A1B0GV72 72 aa8.15□□□□□ -1.1
SS18L1-205ENST00000492466 ASB16-AS1Q495Z4 193 aa8.15□□□□□ -1.1
SS18L1-205ENST00000492466 H3BMG7 143 aa8.14□□□□□ -1.11
SS18L1-205ENST00000492466 H3BQ85 93 aa8.14□□□□□ -1.11
SS18L1-205ENST00000492466 BATFQ16520 125 aa8.14□□□□□ -1.11
SS18L1-205ENST00000492466 Q5XG85 94 aa8.14□□□□□ -1.11
SS18L1-205ENST00000492466 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
SS18L1-205ENST00000492466 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
SS18L1-205ENST00000492466 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
SS18L1-205ENST00000492466 SS18L2Q9UHA2 77 aa8.11□□□□□ -1.11
SS18L1-205ENST00000492466 TMEM256-PLSCR3K7ERE1 68 aa8.1□□□□□ -1.11
SS18L1-205ENST00000492466 TRACP01848 142 aa8.1□□□□□ -1.11
SS18L1-205ENST00000492466 NAA38Q9BRA0 125 aaKnown RBP8.1□□□□□ -1.11
SS18L1-205ENST00000492466 LST1O00453 97 aa8.09□□□□□ -1.11
SS18L1-205ENST00000492466 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
SS18L1-205ENST00000492466 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
SS18L1-205ENST00000492466 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
SS18L1-205ENST00000492466 XP32Q5T750 250 aa8.07□□□□□ -1.12
SS18L1-205ENST00000492466 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
SS18L1-205ENST00000492466 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
SS18L1-205ENST00000492466 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
SS18L1-205ENST00000492466 A0A087WSZ3 146 aa8.05□□□□□ -1.12
SS18L1-205ENST00000492466 Q6Q795 121 aa8.04□□□□□ -1.12
SS18L1-205ENST00000492466 UBE2V1Q13404 147 aa8.03□□□□□ -1.12
SS18L1-205ENST00000492466 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
SS18L1-205ENST00000492466 CCKP06307 115 aa8□□□□□ -1.13
SS18L1-205ENST00000492466 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
SS18L1-205ENST00000492466 LCE2CQ5TA81 110 aa8□□□□□ -1.13
SS18L1-205ENST00000492466 DSCR8Q96T75 97 aa8□□□□□ -1.13
SS18L1-205ENST00000492466 RBM3P98179 157 aaKnown RBP7.99□□□□□ -1.13
SS18L1-205ENST00000492466 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
SS18L1-205ENST00000492466 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
SS18L1-205ENST00000492466 A0A1W2PNM2 257 aa7.98□□□□□ -1.13
SS18L1-205ENST00000492466 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
SS18L1-205ENST00000492466 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
SS18L1-205ENST00000492466 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
SS18L1-205ENST00000492466 C9JAW5 83 aa7.94□□□□□ -1.14
SS18L1-205ENST00000492466 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
SS18L1-205ENST00000492466 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
SS18L1-205ENST00000492466 C9orf118A6NHY6 69 aa7.93□□□□□ -1.14
SS18L1-205ENST00000492466 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
SS18L1-205ENST00000492466 IGKV4-1P06312 121 aa7.91□□□□□ -1.14
SS18L1-205ENST00000492466 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
SS18L1-205ENST00000492466 A0A1W2PPM0 123 aa7.9□□□□□ -1.14
SS18L1-205ENST00000492466 TAX1BP3O14907 124 aa7.9□□□□□ -1.14
SS18L1-205ENST00000492466 Q96NJ1 140 aa7.89□□□□□ -1.15
SS18L1-205ENST00000492466 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
SS18L1-205ENST00000492466 MT1HP80294 61 aa7.87□□□□□ -1.15
SS18L1-205ENST00000492466 DEFB116Q30KQ4 102 aa7.86□□□□□ -1.15
SS18L1-205ENST00000492466 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
SS18L1-205ENST00000492466 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
SS18L1-205ENST00000492466 PDE6GP18545 87 aa7.85□□□□□ -1.15
SS18L1-205ENST00000492466 DSCR10P59022 87 aa7.85□□□□□ -1.15
SS18L1-205ENST00000492466 COL5A1-AS1Q5SY13 56 aa7.85□□□□□ -1.15
SS18L1-205ENST00000492466 CRCT1Q9UGL9 99 aa7.85□□□□□ -1.15
SS18L1-205ENST00000492466 H3BT86 120 aa7.84□□□□□ -1.15
SS18L1-205ENST00000492466 ATP11AUNQ6ZP68 121 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms