RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
USP39-217ENST00000491659 TRAV13-2A0A0B4J235 113 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 CFC1P0CG37 223 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 Q8N377 158 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 LAMTOR3Q9UHA4 124 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
USP39-217ENST00000491659 K7EP34 96 aa8.53□□□□□ -1.04
USP39-217ENST00000491659 SLC25A20O43772 301 aa8.53□□□□□ -1.04
USP39-217ENST00000491659 NAA38Q9BRA0 125 aaKnown RBP8.53□□□□□ -1.04
USP39-217ENST00000491659 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
USP39-217ENST00000491659 DEFB105AQ8NG35 78 aa8.51□□□□□ -1.05
USP39-217ENST00000491659 TEX49A0A1B0GTD5 131 aa8.5□□□□□ -1.05
USP39-217ENST00000491659 SCGB1C2P0DMR2 95 aa8.49□□□□□ -1.05
USP39-217ENST00000491659 Q1RN00 199 aa8.49□□□□□ -1.05
USP39-217ENST00000491659 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
USP39-217ENST00000491659 PSMB2P49721 201 aa8.48□□□□□ -1.05
USP39-217ENST00000491659 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
USP39-217ENST00000491659 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
USP39-217ENST00000491659 TRBV20-1A0A075B6N2 111 aa8.46□□□□□ -1.06
USP39-217ENST00000491659 COX6CP09669 75 aa8.46□□□□□ -1.06
USP39-217ENST00000491659 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.06
USP39-217ENST00000491659 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
USP39-217ENST00000491659 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
USP39-217ENST00000491659 H7C2G1 150 aa8.45□□□□□ -1.06
USP39-217ENST00000491659 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
USP39-217ENST00000491659 MUC2Q02817 5179 aa8.43□□□□□ -1.06
USP39-217ENST00000491659 F8W1H4 67 aa8.42□□□□□ -1.06
USP39-217ENST00000491659 CD164Q04900 197 aa8.42□□□□□ -1.06
USP39-217ENST00000491659 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
USP39-217ENST00000491659 F8WEM9 126 aa8.38□□□□□ -1.07
USP39-217ENST00000491659 H3BMG7 143 aa8.38□□□□□ -1.07
USP39-217ENST00000491659 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
USP39-217ENST00000491659 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
USP39-217ENST00000491659 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
USP39-217ENST00000491659 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
USP39-217ENST00000491659 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
USP39-217ENST00000491659 TRIAP1O43715 76 aa8.36□□□□□ -1.07
USP39-217ENST00000491659 TCL1BO95988 128 aa8.36□□□□□ -1.07
USP39-217ENST00000491659 Q6ZQY7 126 aa8.36□□□□□ -1.07
USP39-217ENST00000491659 XP32Q5T750 250 aa8.34□□□□□ -1.07
USP39-217ENST00000491659 Q5XG85 94 aa8.33□□□□□ -1.08
USP39-217ENST00000491659 A0A0G2JQZ4 141 aa8.32□□□□□ -1.08
USP39-217ENST00000491659 K7ERU9 68 aa8.32□□□□□ -1.08
USP39-217ENST00000491659 H0YGX0 51 aa8.31□□□□□ -1.08
USP39-217ENST00000491659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.31□□□□□ -1.08
USP39-217ENST00000491659 J3QR89 54 aa8.3□□□□□ -1.08
USP39-217ENST00000491659 PRO0461Q9UI25 63 aa8.3□□□□□ -1.08
USP39-217ENST00000491659 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 C9JAW5 83 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 LST1O00453 97 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 Q6JHZ5 121 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 PPDPFLQ8WWR9 84 aa8.29□□□□□ -1.08
USP39-217ENST00000491659 SNCGO76070 127 aa8.27□□□□□ -1.09
USP39-217ENST00000491659 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
USP39-217ENST00000491659 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
USP39-217ENST00000491659 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
USP39-217ENST00000491659 TRACP01848 142 aa8.26□□□□□ -1.09
USP39-217ENST00000491659 H3BT86 120 aa8.25□□□□□ -1.09
USP39-217ENST00000491659 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
USP39-217ENST00000491659 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
USP39-217ENST00000491659 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
USP39-217ENST00000491659 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
USP39-217ENST00000491659 IGFL1Q6UW32 110 aa8.24□□□□□ -1.09
USP39-217ENST00000491659 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
USP39-217ENST00000491659 TEN1Q86WV5 123 aa8.23□□□□□ -1.09
USP39-217ENST00000491659 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
USP39-217ENST00000491659 TRBV7-7A0A0K0K1E9 115 aa8.22□□□□□ -1.09
USP39-217ENST00000491659 DNAL4O96015 105 aa8.22□□□□□ -1.09
USP39-217ENST00000491659 A0A1B0GX51 115 aa8.21□□□□□ -1.1
USP39-217ENST00000491659 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
USP39-217ENST00000491659 BAALC-AS2P0C853 105 aa8.19□□□□□ -1.1
USP39-217ENST00000491659 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
USP39-217ENST00000491659 FAM218AQ96MZ4 157 aa8.19□□□□□ -1.1
USP39-217ENST00000491659 GHRHP01286 108 aa8.17□□□□□ -1.1
USP39-217ENST00000491659 VPS25Q9BRG1 176 aa8.17□□□□□ -1.1
USP39-217ENST00000491659 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
USP39-217ENST00000491659 H3BQ85 93 aa8.13□□□□□ -1.11
USP39-217ENST00000491659 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
USP39-217ENST00000491659 ORMDL1Q9P0S3 153 aa8.13□□□□□ -1.11
USP39-217ENST00000491659 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
USP39-217ENST00000491659 Q6Q795 121 aa8.11□□□□□ -1.11
USP39-217ENST00000491659 TMEM256-PLSCR3K7ERE1 68 aa8.09□□□□□ -1.11
USP39-217ENST00000491659 A0A087WSZ3 146 aa8.06□□□□□ -1.12
USP39-217ENST00000491659 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
USP39-217ENST00000491659 JMJD7-PLA2G4BH0Y9G9 81 aa8.04□□□□□ -1.12
USP39-217ENST00000491659 ACYP1P07311 99 aa8.04□□□□□ -1.12
USP39-217ENST00000491659 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
USP39-217ENST00000491659 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
USP39-217ENST00000491659 A0A1B0GV72 72 aa8.01□□□□□ -1.13
USP39-217ENST00000491659 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
USP39-217ENST00000491659 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
USP39-217ENST00000491659 A0A1W2PNM2 257 aa8□□□□□ -1.13
USP39-217ENST00000491659 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
USP39-217ENST00000491659 Q75L30 129 aa8□□□□□ -1.13
USP39-217ENST00000491659 ATP11AUNQ6ZP68 121 aa7.99□□□□□ -1.13
USP39-217ENST00000491659 Q96NJ1 140 aa7.99□□□□□ -1.13
USP39-217ENST00000491659 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms