RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
PDLIM2-217ENST00000491330 TCL1BO95988 128 aa9.19□□□□□ -0.94
PDLIM2-217ENST00000491330 XP32Q5T750 250 aa9.19□□□□□ -0.94
PDLIM2-217ENST00000491330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-217ENST00000491330 H0YGX0 51 aa9.18□□□□□ -0.94
PDLIM2-217ENST00000491330 GHRHP01286 108 aa9.18□□□□□ -0.94
PDLIM2-217ENST00000491330 OCIAD2Q56VL3 154 aa9.18□□□□□ -0.94
PDLIM2-217ENST00000491330 CFC1BP0CG36 223 aa9.17□□□□□ -0.94
PDLIM2-217ENST00000491330 CFC1P0CG37 223 aa9.17□□□□□ -0.94
PDLIM2-217ENST00000491330 C2orf91Q6ZV80 131 aa9.17□□□□□ -0.94
PDLIM2-217ENST00000491330 CEND1Q8N111 149 aa9.17□□□□□ -0.94
PDLIM2-217ENST00000491330 Q6ZQY7 126 aa9.16□□□□□ -0.94
PDLIM2-217ENST00000491330 PYY3Q5JQD4 70 aa9.15□□□□□ -0.94
PDLIM2-217ENST00000491330 Q6JHZ5 121 aa9.15□□□□□ -0.94
PDLIM2-217ENST00000491330 C12orf57Q99622 126 aa9.15□□□□□ -0.94
PDLIM2-217ENST00000491330 A0A1B0GX51 115 aa9.14□□□□□ -0.95
PDLIM2-217ENST00000491330 IGLV8-61A0A075B6I0 122 aa9.13□□□□□ -0.95
PDLIM2-217ENST00000491330 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
PDLIM2-217ENST00000491330 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
PDLIM2-217ENST00000491330 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
PDLIM2-217ENST00000491330 HSD52Q0P140 79 aa9.1□□□□□ -0.95
PDLIM2-217ENST00000491330 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
PDLIM2-217ENST00000491330 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
PDLIM2-217ENST00000491330 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
PDLIM2-217ENST00000491330 H3BQ85 93 aa9.07□□□□□ -0.96
PDLIM2-217ENST00000491330 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
PDLIM2-217ENST00000491330 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
PDLIM2-217ENST00000491330 FXYD2P54710 66 aa9.05□□□□□ -0.96
PDLIM2-217ENST00000491330 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
PDLIM2-217ENST00000491330 COX6CP09669 75 aa9.03□□□□□ -0.96
PDLIM2-217ENST00000491330 MUC17Q685J3 4493 aa9.02□□□□□ -0.96
PDLIM2-217ENST00000491330 A0A0G2JQZ4 141 aa9.01□□□□□ -0.97
PDLIM2-217ENST00000491330 TRBV7-7A0A0K0K1E9 115 aa9□□□□□ -0.97
PDLIM2-217ENST00000491330 IGFL1Q6UW32 110 aa9□□□□□ -0.97
PDLIM2-217ENST00000491330 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
PDLIM2-217ENST00000491330 Q6Q795 121 aa8.99□□□□□ -0.97
PDLIM2-217ENST00000491330 TRIAP1O43715 76 aa8.98□□□□□ -0.97
PDLIM2-217ENST00000491330 DNAL4O96015 105 aa8.98□□□□□ -0.97
PDLIM2-217ENST00000491330 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
PDLIM2-217ENST00000491330 SS18L2Q9UHA2 77 aa8.98□□□□□ -0.97
PDLIM2-217ENST00000491330 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
PDLIM2-217ENST00000491330 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
PDLIM2-217ENST00000491330 FAT4Q6V0I7 4981 aa8.96□□□□□ -0.97
PDLIM2-217ENST00000491330 LST1O00453 97 aa8.96□□□□□ -0.98
PDLIM2-217ENST00000491330 PSMB2P49721 201 aa8.96□□□□□ -0.98
PDLIM2-217ENST00000491330 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
PDLIM2-217ENST00000491330 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
PDLIM2-217ENST00000491330 TMEM256-PLSCR3K7ERE1 68 aa8.93□□□□□ -0.98
PDLIM2-217ENST00000491330 ORMDL1Q9P0S3 153 aa8.93□□□□□ -0.98
PDLIM2-217ENST00000491330 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
PDLIM2-217ENST00000491330 H3BMG7 143 aa8.91□□□□□ -0.98
PDLIM2-217ENST00000491330 FABP2P12104 132 aa8.91□□□□□ -0.98
PDLIM2-217ENST00000491330 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
PDLIM2-217ENST00000491330 H3BUT2 72 aa8.9□□□□□ -0.98
PDLIM2-217ENST00000491330 M0R143 59 aa8.9□□□□□ -0.98
PDLIM2-217ENST00000491330 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
PDLIM2-217ENST00000491330 K7ERJ3 54 aa8.88□□□□□ -0.99
PDLIM2-217ENST00000491330 TRACP01848 142 aa8.88□□□□□ -0.99
PDLIM2-217ENST00000491330 UBE2V1Q13404 147 aa8.86□□□□□ -0.99
PDLIM2-217ENST00000491330 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
PDLIM2-217ENST00000491330 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
PDLIM2-217ENST00000491330 TRBV7-4A0A0J9YYF1 115 aa8.83□□□□□ -1
PDLIM2-217ENST00000491330 M0R2T5 61 aa8.83□□□□□ -1
PDLIM2-217ENST00000491330 ANKRD29Q8N6D5 301 aa8.82□□□□□ -1
PDLIM2-217ENST00000491330 Q96NJ1 140 aa8.82□□□□□ -1
PDLIM2-217ENST00000491330 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
PDLIM2-217ENST00000491330 Q75L30 129 aa8.81□□□□□ -1
PDLIM2-217ENST00000491330 A0A087WSZ3 146 aa8.8□□□□□ -1
PDLIM2-217ENST00000491330 TSTD3H0UI37 97 aa8.8□□□□□ -1
PDLIM2-217ENST00000491330 LYRM7Q5U5X0 104 aa8.78□□□□□ -1
PDLIM2-217ENST00000491330 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
PDLIM2-217ENST00000491330 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
PDLIM2-217ENST00000491330 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
PDLIM2-217ENST00000491330 RBM3P98179 157 aaKnown RBP8.75□□□□□ -1.01
PDLIM2-217ENST00000491330 MT1HP80294 61 aa8.74□□□□□ -1.01
PDLIM2-217ENST00000491330 ATXN8Q156A1 80 aa8.74□□□□□ -1.01
PDLIM2-217ENST00000491330 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
PDLIM2-217ENST00000491330 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
PDLIM2-217ENST00000491330 SIGMAR1Q99720 223 aa8.74□□□□□ -1.01
PDLIM2-217ENST00000491330 TRBV20-1A0A075B6N2 111 aa8.73□□□□□ -1.01
PDLIM2-217ENST00000491330 CCKP06307 115 aa8.73□□□□□ -1.01
PDLIM2-217ENST00000491330 BAALC-AS2P0C853 105 aa8.71□□□□□ -1.02
PDLIM2-217ENST00000491330 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.02
PDLIM2-217ENST00000491330 A0A1B0GW54 56 aa8.7□□□□□ -1.02
PDLIM2-217ENST00000491330 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
PDLIM2-217ENST00000491330 C9JAW5 83 aa8.68□□□□□ -1.02
PDLIM2-217ENST00000491330 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
PDLIM2-217ENST00000491330 PDE6GP18545 87 aa8.68□□□□□ -1.02
PDLIM2-217ENST00000491330 LINC00313P59037 77 aa8.68□□□□□ -1.02
PDLIM2-217ENST00000491330 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
PDLIM2-217ENST00000491330 A0A1B0GV72 72 aa8.66□□□□□ -1.02
PDLIM2-217ENST00000491330 LOC105371267A0A1B0GV96 52 aa8.65□□□□□ -1.02
PDLIM2-217ENST00000491330 A8MUU9 505 aa8.65□□□□□ -1.02
PDLIM2-217ENST00000491330 DSCR10P59022 87 aa8.64□□□□□ -1.03
PDLIM2-217ENST00000491330 LINC00472Q9H8W2 130 aa8.64□□□□□ -1.03
PDLIM2-217ENST00000491330 VPS25Q9BRG1 176 aa8.63□□□□□ -1.03
PDLIM2-217ENST00000491330 J3KT08 172 aa8.62□□□□□ -1.03
PDLIM2-217ENST00000491330 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
PDLIM2-217ENST00000491330 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
PDLIM2-217ENST00000491330 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms