RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
SMPD4-219ENST00000491128 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
SMPD4-219ENST00000491128 BCE1O60756 84 aa8.56□□□□□ -1.04
SMPD4-219ENST00000491128 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
SMPD4-219ENST00000491128 UQCRQO14949 82 aa8.56□□□□□ -1.04
SMPD4-219ENST00000491128 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
SMPD4-219ENST00000491128 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
SMPD4-219ENST00000491128 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
SMPD4-219ENST00000491128 Q6ZSA8 131 aa8.53□□□□□ -1.04
SMPD4-219ENST00000491128 J3KT08 172 aa8.53□□□□□ -1.04
SMPD4-219ENST00000491128 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
SMPD4-219ENST00000491128 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
SMPD4-219ENST00000491128 KRTAP13-1Q8IUC0 172 aa8.52□□□□□ -1.05
SMPD4-219ENST00000491128 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
SMPD4-219ENST00000491128 JMJD7-PLA2G4BH0Y9G9 81 aa8.51□□□□□ -1.05
SMPD4-219ENST00000491128 COX7CP15954 63 aa8.5□□□□□ -1.05
SMPD4-219ENST00000491128 IGLV5-48A0A075B6I7 105 aa8.49□□□□□ -1.05
SMPD4-219ENST00000491128 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
SMPD4-219ENST00000491128 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
SMPD4-219ENST00000491128 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
SMPD4-219ENST00000491128 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
SMPD4-219ENST00000491128 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
SMPD4-219ENST00000491128 FAT1Q14517 4588 aa8.49□□□□□ -1.05
SMPD4-219ENST00000491128 CRYGAP11844 174 aa8.47□□□□□ -1.05
SMPD4-219ENST00000491128 Q6ZQT0 140 aa8.47□□□□□ -1.05
SMPD4-219ENST00000491128 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
SMPD4-219ENST00000491128 H0Y9J4 135 aa8.47□□□□□ -1.05
SMPD4-219ENST00000491128 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.05
SMPD4-219ENST00000491128 CCKP06307 115 aa8.46□□□□□ -1.05
SMPD4-219ENST00000491128 LINC00846Q9NV44 126 aa8.46□□□□□ -1.05
SMPD4-219ENST00000491128 ZNF861PO60384 105 aa8.45□□□□□ -1.06
SMPD4-219ENST00000491128 GHRHP01286 108 aa8.45□□□□□ -1.06
SMPD4-219ENST00000491128 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
SMPD4-219ENST00000491128 TRBV7-4A0A0J9YYF1 115 aa8.44□□□□□ -1.06
SMPD4-219ENST00000491128 ATOX1O00244 68 aa8.43□□□□□ -1.06
SMPD4-219ENST00000491128 H3BQ85 93 aa8.43□□□□□ -1.06
SMPD4-219ENST00000491128 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
SMPD4-219ENST00000491128 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
SMPD4-219ENST00000491128 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
SMPD4-219ENST00000491128 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
SMPD4-219ENST00000491128 F8WEM9 126 aa8.39□□□□□ -1.07
SMPD4-219ENST00000491128 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
SMPD4-219ENST00000491128 A0A087WVE0 104 aa8.39□□□□□ -1.07
SMPD4-219ENST00000491128 Q6JHZ5 121 aa8.39□□□□□ -1.07
SMPD4-219ENST00000491128 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
SMPD4-219ENST00000491128 TMEM258P61165 79 aa8.38□□□□□ -1.07
SMPD4-219ENST00000491128 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
SMPD4-219ENST00000491128 OXTP01178 125 aa8.36□□□□□ -1.07
SMPD4-219ENST00000491128 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
SMPD4-219ENST00000491128 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SMPD4-219ENST00000491128 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
SMPD4-219ENST00000491128 PDE6GP18545 87 aa8.33□□□□□ -1.08
SMPD4-219ENST00000491128 MOBPQ13875 183 aa8.32□□□□□ -1.08
SMPD4-219ENST00000491128 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
SMPD4-219ENST00000491128 Q6ZVQ6 151 aa8.31□□□□□ -1.08
SMPD4-219ENST00000491128 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
SMPD4-219ENST00000491128 Q8NBF4 154 aa8.3□□□□□ -1.08
SMPD4-219ENST00000491128 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
SMPD4-219ENST00000491128 ZNF706Q9Y5V0 76 aaPredicted RBP8.3□□□□□ -1.08
SMPD4-219ENST00000491128 HSPG2P98160 4391 aa8.3□□□□□ -1.08
SMPD4-219ENST00000491128 A0A087X002 238 aa8.29□□□□□ -1.08
SMPD4-219ENST00000491128 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
SMPD4-219ENST00000491128 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
SMPD4-219ENST00000491128 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
SMPD4-219ENST00000491128 A0A087WSZ3 146 aa8.28□□□□□ -1.08
SMPD4-219ENST00000491128 Q5XG85 94 aa8.28□□□□□ -1.08
SMPD4-219ENST00000491128 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
SMPD4-219ENST00000491128 NREPQ16612 68 aa8.25□□□□□ -1.09
SMPD4-219ENST00000491128 Q8N9L7 120 aa8.25□□□□□ -1.09
SMPD4-219ENST00000491128 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
SMPD4-219ENST00000491128 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
SMPD4-219ENST00000491128 RYR1P21817 5038 aa8.23□□□□□ -1.09
SMPD4-219ENST00000491128 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
SMPD4-219ENST00000491128 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
SMPD4-219ENST00000491128 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.09
SMPD4-219ENST00000491128 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
SMPD4-219ENST00000491128 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
SMPD4-219ENST00000491128 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
SMPD4-219ENST00000491128 BPY2O14599 106 aa8.17□□□□□ -1.1
SMPD4-219ENST00000491128 PRR26Q8N8Z3 221 aa8.17□□□□□ -1.1
SMPD4-219ENST00000491128 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
SMPD4-219ENST00000491128 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.1
SMPD4-219ENST00000491128 FAM236CP0DP71 79 aa8.15□□□□□ -1.1
SMPD4-219ENST00000491128 Q5VSD8 79 aa8.14□□□□□ -1.11
SMPD4-219ENST00000491128 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
SMPD4-219ENST00000491128 H7BZZ5 65 aa8.14□□□□□ -1.11
SMPD4-219ENST00000491128 SERP1Q9Y6X1 66 aa8.14□□□□□ -1.11
SMPD4-219ENST00000491128 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
SMPD4-219ENST00000491128 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
SMPD4-219ENST00000491128 DSCR10P59022 87 aa8.12□□□□□ -1.11
SMPD4-219ENST00000491128 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 TRAV7A0A075B6U4 112 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 K7EQZ3 153 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 CXCL6P80162 114 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
SMPD4-219ENST00000491128 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
SMPD4-219ENST00000491128 A0A1B0GW54 56 aa8.1□□□□□ -1.11
SMPD4-219ENST00000491128 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
SMPD4-219ENST00000491128 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms