RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 Q75L30 129 aa4.54□□□□□ -1.68
SRRM1-217ENST00000490543 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
SRRM1-217ENST00000490543 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
SRRM1-217ENST00000490543 CBY1Q9Y3M2 126 aa4.54□□□□□ -1.68
SRRM1-217ENST00000490543 TCL1BO95988 128 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 C10orf91Q5T1B1 145 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 PCP2Q8IVA1 136 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 LINC00308Q8TCZ7 52 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 LITAFQ99732 161 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
SRRM1-217ENST00000490543 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
SRRM1-217ENST00000490543 PLNP26678 52 aa4.52□□□□□ -1.69
SRRM1-217ENST00000490543 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
SRRM1-217ENST00000490543 HSBP1O75506 76 aa4.51□□□□□ -1.69
SRRM1-217ENST00000490543 DPM2O94777 84 aa4.51□□□□□ -1.69
SRRM1-217ENST00000490543 HERVK_113P61574 105 aa4.51□□□□□ -1.69
SRRM1-217ENST00000490543 SPANXDQ9BXN6 97 aa4.51□□□□□ -1.69
SRRM1-217ENST00000490543 PAM16Q9Y3D7 125 aa4.51□□□□□ -1.69
SRRM1-217ENST00000490543 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SRRM1-217ENST00000490543 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
SRRM1-217ENST00000490543 IGKCP01834 107 aa4.49□□□□□ -1.69
SRRM1-217ENST00000490543 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
SRRM1-217ENST00000490543 FABP4P15090 132 aa4.48□□□□□ -1.69
SRRM1-217ENST00000490543 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
SRRM1-217ENST00000490543 Q96NJ1 140 aa4.48□□□□□ -1.69
SRRM1-217ENST00000490543 TRBV20-1A0A075B6N2 111 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 E9PLD3 99 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 LINC00518Q8N0U6 118 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 YPEL4Q96NS1 127 aa4.47□□□□□ -1.69
SRRM1-217ENST00000490543 A0A1B0GWB2 263 aa4.46□□□□□ -1.7
SRRM1-217ENST00000490543 SERF1AO75920 110 aa4.46□□□□□ -1.7
SRRM1-217ENST00000490543 TRBV7-7A0A0K0K1E9 115 aa4.45□□□□□ -1.7
SRRM1-217ENST00000490543 TIMM17BO60830 172 aa4.45□□□□□ -1.7
SRRM1-217ENST00000490543 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
SRRM1-217ENST00000490543 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
SRRM1-217ENST00000490543 A8MUU9 505 aa4.44□□□□□ -1.7
SRRM1-217ENST00000490543 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
SRRM1-217ENST00000490543 LINC00846Q9NV44 126 aa4.44□□□□□ -1.7
SRRM1-217ENST00000490543 HSPB8Q9UJY1 196 aa4.44□□□□□ -1.7
SRRM1-217ENST00000490543 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
SRRM1-217ENST00000490543 APOC3P02656 99 aa4.43□□□□□ -1.7
SRRM1-217ENST00000490543 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
SRRM1-217ENST00000490543 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
SRRM1-217ENST00000490543 A6NDN8 102 aa4.42□□□□□ -1.7
SRRM1-217ENST00000490543 F8WEM9 126 aa4.42□□□□□ -1.7
SRRM1-217ENST00000490543 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
SRRM1-217ENST00000490543 ZNF815PA8K554 130 aa4.41□□□□□ -1.7
SRRM1-217ENST00000490543 TRGC2P03986 189 aa4.41□□□□□ -1.7
SRRM1-217ENST00000490543 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
SRRM1-217ENST00000490543 A4D1N5 150 aa4.4□□□□□ -1.71
SRRM1-217ENST00000490543 LST1O00453 97 aa4.4□□□□□ -1.71
SRRM1-217ENST00000490543 Q6JHZ5 121 aa4.4□□□□□ -1.71
SRRM1-217ENST00000490543 SNAPINO95295 136 aa4.39□□□□□ -1.71
SRRM1-217ENST00000490543 HRES1P13985 223 aa4.39□□□□□ -1.71
SRRM1-217ENST00000490543 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
SRRM1-217ENST00000490543 OCIAD2Q56VL3 154 aa4.39□□□□□ -1.71
SRRM1-217ENST00000490543 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
SRRM1-217ENST00000490543 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
SRRM1-217ENST00000490543 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
SRRM1-217ENST00000490543 SVBPQ8N300 66 aa4.38□□□□□ -1.71
SRRM1-217ENST00000490543 SYS1-DBNDD2H3BUS1 97 aa4.37□□□□□ -1.71
SRRM1-217ENST00000490543 Q6ZQY7 126 aa4.37□□□□□ -1.71
SRRM1-217ENST00000490543 SLC7A5P1Q8MH63 180 aa4.37□□□□□ -1.71
SRRM1-217ENST00000490543 NEBP20929 6669 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 TRAV13-2A0A0B4J235 113 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 DSCR10P59022 87 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
SRRM1-217ENST00000490543 H3BUT2 72 aa4.35□□□□□ -1.71
SRRM1-217ENST00000490543 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
SRRM1-217ENST00000490543 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
SRRM1-217ENST00000490543 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
SRRM1-217ENST00000490543 IFITM1P13164 125 aa4.34□□□□□ -1.71
SRRM1-217ENST00000490543 NDUFA5Q16718 116 aa4.34□□□□□ -1.71
SRRM1-217ENST00000490543 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.71
SRRM1-217ENST00000490543 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
SRRM1-217ENST00000490543 VAMP3Q15836 100 aa4.32□□□□□ -1.72
SRRM1-217ENST00000490543 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
SRRM1-217ENST00000490543 Q6ZVH6 145 aa4.3□□□□□ -1.72
SRRM1-217ENST00000490543 SNHG12Q9BXW3 62 aa4.3□□□□□ -1.72
SRRM1-217ENST00000490543 SS18L2Q9UHA2 77 aa4.3□□□□□ -1.72
SRRM1-217ENST00000490543 A0A087WSZ3 146 aa4.29□□□□□ -1.72
SRRM1-217ENST00000490543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-217ENST00000490543 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SRRM1-217ENST00000490543 LINC00313P59037 77 aa4.28□□□□□ -1.72
SRRM1-217ENST00000490543 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
SRRM1-217ENST00000490543 COLCA2A8K830 154 aa4.27□□□□□ -1.73
SRRM1-217ENST00000490543 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
SRRM1-217ENST00000490543 TEN1Q86WV5 123 aa4.27□□□□□ -1.73
SRRM1-217ENST00000490543 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
SRRM1-217ENST00000490543 PPDPFLQ8WWR9 84 aa4.26□□□□□ -1.73
SRRM1-217ENST00000490543 A8MWP4 228 aa4.25□□□□□ -1.73
SRRM1-217ENST00000490543 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SRRM1-217ENST00000490543 ATOH7Q8N100 152 aa4.25□□□□□ -1.73
SRRM1-217ENST00000490543 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BKO60814 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BJP06899 126 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms