RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 ZCCHC13Q8WW36 166 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-205ENST00000489144 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
POLR2J3-205ENST00000489144 KMT2AQ03164 3969 aa11.83□□□□□ -0.52
POLR2J3-205ENST00000489144 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
POLR2J3-205ENST00000489144 LIMD2Q9BT23 127 aa11.83□□□□□ -0.52
POLR2J3-205ENST00000489144 Q8NDZ9 215 aa11.82□□□□□ -0.52
POLR2J3-205ENST00000489144 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
POLR2J3-205ENST00000489144 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
POLR2J3-205ENST00000489144 NUPR2A6NF83 97 aa11.81□□□□□ -0.52
POLR2J3-205ENST00000489144 Q6ZQY7 126 aa11.8□□□□□ -0.52
POLR2J3-205ENST00000489144 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.52
POLR2J3-205ENST00000489144 COX7BP24311 80 aa11.76□□□□□ -0.53
POLR2J3-205ENST00000489144 PRR4Q16378 134 aa11.76□□□□□ -0.53
POLR2J3-205ENST00000489144 SMIM29Q86T20 159 aa11.76□□□□□ -0.53
POLR2J3-205ENST00000489144 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
POLR2J3-205ENST00000489144 PRR15LQ9BU68 103 aa11.75□□□□□ -0.53
POLR2J3-205ENST00000489144 Q75L30 129 aa11.73□□□□□ -0.53
POLR2J3-205ENST00000489144 GVQW2A0A096LPI5 108 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-205ENST00000489144 A6NED7 52 aa11.72□□□□□ -0.53
POLR2J3-205ENST00000489144 COX17Q14061 63 aa11.71□□□□□ -0.53
POLR2J3-205ENST00000489144 NKAPP1Q8N9T2 125 aa11.71□□□□□ -0.53
POLR2J3-205ENST00000489144 CDC42SE1Q9NRR8 79 aa11.71□□□□□ -0.54
POLR2J3-205ENST00000489144 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-205ENST00000489144 NDUFB1O75438 58 aa11.7□□□□□ -0.54
POLR2J3-205ENST00000489144 DNAH2Q9P225 4427 aa11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 ELOF1P60002 83 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-205ENST00000489144 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
POLR2J3-205ENST00000489144 MOBPQ13875 183 aa11.64□□□□□ -0.55
POLR2J3-205ENST00000489144 LY6G6CO95867 125 aa11.62□□□□□ -0.55
POLR2J3-205ENST00000489144 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
POLR2J3-205ENST00000489144 LINC00208Q96KT6 92 aa11.62□□□□□ -0.55
POLR2J3-205ENST00000489144 IGLV6-57P01721 117 aa11.6□□□□□ -0.55
POLR2J3-205ENST00000489144 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
POLR2J3-205ENST00000489144 Q9BRP9 147 aa11.6□□□□□ -0.55
POLR2J3-205ENST00000489144 SERTAD4-AS1Q5TG53 156 aa11.59□□□□□ -0.55
POLR2J3-205ENST00000489144 HYDINQ4G0P3 5121 aa11.57□□□□□ -0.56
POLR2J3-205ENST00000489144 VPREB1P12018 145 aa11.57□□□□□ -0.56
POLR2J3-205ENST00000489144 IGKV2-24A0A0C4DH68 120 aa11.56□□□□□ -0.56
POLR2J3-205ENST00000489144 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
POLR2J3-205ENST00000489144 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-205ENST00000489144 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
POLR2J3-205ENST00000489144 LINC01554Q52M75 96 aa11.55□□□□□ -0.56
POLR2J3-205ENST00000489144 SPANXA2-OT1Q8N9U9 137 aa11.54□□□□□ -0.56
POLR2J3-205ENST00000489144 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
POLR2J3-205ENST00000489144 LINC00313P59037 77 aa11.51□□□□□ -0.57
POLR2J3-205ENST00000489144 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
POLR2J3-205ENST00000489144 KRTAP7-1Q8IUC3 87 aa11.5□□□□□ -0.57
POLR2J3-205ENST00000489144 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
POLR2J3-205ENST00000489144 A0A096LNI7 61 aa11.5□□□□□ -0.57
POLR2J3-205ENST00000489144 MP68P56378 58 aa11.47□□□□□ -0.57
POLR2J3-205ENST00000489144 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
POLR2J3-205ENST00000489144 Q6ZR54 194 aa11.47□□□□□ -0.57
POLR2J3-205ENST00000489144 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.57
POLR2J3-205ENST00000489144 TLX1NBP0CAT3 122 aa11.46□□□□□ -0.58
POLR2J3-205ENST00000489144 C7orf33Q8WU49 177 aa11.46□□□□□ -0.58
POLR2J3-205ENST00000489144 A0A1B0GW54 56 aa11.45□□□□□ -0.58
POLR2J3-205ENST00000489144 PRAC1Q96KF2 57 aa11.45□□□□□ -0.58
POLR2J3-205ENST00000489144 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-205ENST00000489144 PANO1I0J062 215 aa11.43□□□□□ -0.58
POLR2J3-205ENST00000489144 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
POLR2J3-205ENST00000489144 A0A087WTM6 91 aa11.42□□□□□ -0.58
POLR2J3-205ENST00000489144 DSCR10P59022 87 aa11.41□□□□□ -0.58
POLR2J3-205ENST00000489144 DNAH6Q9C0G6 4158 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 FRAS1Q86XX4 4008 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 ALMS1Q8TCU4 4167 aa11.4□□□□□ -0.58
POLR2J3-205ENST00000489144 CASC2Q6XLA1 102 aa11.39□□□□□ -0.59
POLR2J3-205ENST00000489144 LINC01558Q9Y6Z2 57 aa11.39□□□□□ -0.59
POLR2J3-205ENST00000489144 K7EQZ3 153 aa11.38□□□□□ -0.59
POLR2J3-205ENST00000489144 COA5Q86WW8 74 aa11.37□□□□□ -0.59
POLR2J3-205ENST00000489144 TNP2Q05952 138 aa11.37□□□□□ -0.59
POLR2J3-205ENST00000489144 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
POLR2J3-205ENST00000489144 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
POLR2J3-205ENST00000489144 SRRM2Q9UQ35 2752 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-205ENST00000489144 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
POLR2J3-205ENST00000489144 SACSQ9NZJ4 4579 aa11.34□□□□□ -0.59
POLR2J3-205ENST00000489144 IGLV5-48A0A075B6I7 105 aa11.34□□□□□ -0.59
POLR2J3-205ENST00000489144 H3BPC8 53 aa11.34□□□□□ -0.59
POLR2J3-205ENST00000489144 SPINK7P58062 85 aa11.34□□□□□ -0.59
POLR2J3-205ENST00000489144 LINC00528Q8N1L1 170 aa11.34□□□□□ -0.59
POLR2J3-205ENST00000489144 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-205ENST00000489144 KRTAP11-1Q8IUC1 163 aa11.32□□□□□ -0.6
POLR2J3-205ENST00000489144 RTL8CO15255 209 aa11.32□□□□□ -0.6
POLR2J3-205ENST00000489144 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
POLR2J3-205ENST00000489144 A0A1W2PNM2 257 aa11.31□□□□□ -0.6
POLR2J3-205ENST00000489144 FAT2Q9NYQ8 4349 aa11.31□□□□□ -0.6
POLR2J3-205ENST00000489144 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
POLR2J3-205ENST00000489144 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
POLR2J3-205ENST00000489144 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
POLR2J3-205ENST00000489144 DNAH5Q8TE73 4624 aa11.29□□□□□ -0.6
POLR2J3-205ENST00000489144 IGLV5-37A0A075B6J1 123 aa11.28□□□□□ -0.6
POLR2J3-205ENST00000489144 KRTAP10-2P60368 255 aa11.27□□□□□ -0.61
POLR2J3-205ENST00000489144 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
POLR2J3-205ENST00000489144 SPAG11AQ6PDA7 123 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms