RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 FAT3Q8TDW7 4589 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 LRRIQ1Q96JM4 1722 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 CEP290O15078 2479 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 PTPN23Q9H3S7 1636 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.03□□□□□ -2.41
CD46-215ENST00000488596 PLXNC1O60486 1568 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 MAP3K1Q13233 1512 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.42
CD46-215ENST00000488596 ITSN1Q15811 1721 aa-0.04□□□□□ -2.42
CD46-215ENST00000488596 KMT2CQ8NEZ4 4911 aaKnown RBP-0.04□□□□□ -2.42
CD46-215ENST00000488596 UMAD1C9J7I0 102 aa-0.04□□□□□ -2.42
CD46-215ENST00000488596 H3BUT2 72 aa-0.04□□□□□ -2.42
CD46-215ENST00000488596 NDUFA3O95167 84 aa-0.04□□□□□ -2.42
CD46-215ENST00000488596 ABCA8O94911 1581 aa-0.04□□□□□ -2.42
CD46-215ENST00000488596 RRBP1Q9P2E9 1410 aaKnown RBP-0.04□□□□□ -2.42
CD46-215ENST00000488596 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 A0A087WXM4 84 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 IFI6P09912 130 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 IFI27P40305 119 aaPredicted RBP-0.05□□□□□ -2.42
CD46-215ENST00000488596 PARP4Q9UKK3 1724 aaKnown RBP-0.05□□□□□ -2.42
CD46-215ENST00000488596 VPS13DQ5THJ4 4388 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 WIZO95785 1651 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
CD46-215ENST00000488596 THOC2Q8NI27 1593 aaKnown RBP-0.06□□□□□ -2.42
CD46-215ENST00000488596 GCN1Q92616 2671 aaKnown RBP-0.06□□□□□ -2.42
CD46-215ENST00000488596 ANK3Q12955 4377 aaKnown RBP-0.06□□□□□ -2.42
CD46-215ENST00000488596 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
CD46-215ENST00000488596 TJP1Q07157 1748 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 MYO5CQ9NQX4 1742 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 DNAH11Q96DT5 4516 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 LCE6AA0A183 80 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 NREPQ16612 68 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 DEFB121Q5J5C9 76 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 BVES-AS1Q5T3Y7 98 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 LRRK2Q5S007 2527 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 DEPDC5O75140 1603 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 KALRNO60229 2985 aa-0.06□□□□□ -2.42
CD46-215ENST00000488596 NRAPQ86VF7 1730 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 DMXL1Q9Y485 3027 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 H0YGG7 62 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 NDUFA4O00483 81 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 C3orf79P0CE67 100 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 SMIM13P0DJ93 91 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 PRO3102Q9H379 93 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 HIVEP1P15822 2718 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 IQGAP3Q86VI3 1631 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 ANKARQ7Z5J8 1434 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 DNAH2Q9P225 4427 aa-0.07□□□□□ -2.42
CD46-215ENST00000488596 SACSQ9NZJ4 4579 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 ZC3H13Q5T200 1668 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 NHSQ6T4R5 1651 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 ANKRD11Q6UB99 2663 aaPredicted RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 TEP1Q99973 2627 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 RNF17Q9BXT8 1623 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 DNAH1Q9P2D7 4330 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 LAMA5O15230 3695 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 LINC00158P58513 81 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 HFM1A2PYH4 1435 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 FASNP49327 2511 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 LMTK2Q8IWU2 1503 aa-0.08□□□□□ -2.42
CD46-215ENST00000488596 SONP18583 2426 aaKnown RBP-0.08□□□□□ -2.42
CD46-215ENST00000488596 CD163L1Q9NR16 1453 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 TACC2O95359 2948 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 PKD1L2Q7Z442 2459 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 CUBNO60494 3623 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 FAT1Q14517 4588 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 ANKRD50Q9ULJ7 1429 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 DEFA5Q01523 94 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 C18orf32Q8TCD1 76 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 MTORP42345 2549 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 FAM186AA6NE01 2351 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 STARD9Q9P2P6 4700 aa-0.09□□□□□ -2.42
CD46-215ENST00000488596 RALGAPBQ86X10 1494 aa-0.1□□□□□ -2.42
CD46-215ENST00000488596 UTP20O75691 2785 aaKnown RBP-0.1□□□□□ -2.42
CD46-215ENST00000488596 HERC1Q15751 4861 aa-0.1□□□□□ -2.42
CD46-215ENST00000488596 H0YAA0 97 aa-0.1□□□□□ -2.43
CD46-215ENST00000488596 SPRR2AP35326 72 aa-0.1□□□□□ -2.43
CD46-215ENST00000488596 DNAH8Q96JB1 4490 aa-0.1□□□□□ -2.43
CD46-215ENST00000488596 UBR4Q5T4S7 5183 aa-0.1□□□□□ -2.43
CD46-215ENST00000488596 HMGA1P17096 107 aaKnown RBP-0.11□□□□□ -2.43
CD46-215ENST00000488596 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
CD46-215ENST00000488596 NBEAQ8NFP9 2946 aa-0.11□□□□□ -2.43
CD46-215ENST00000488596 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
CD46-215ENST00000488596 ANKRD36CQ5JPF3 1778 aa-0.11□□□□□ -2.43
CD46-215ENST00000488596 ACACAQ13085 2346 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 KIAA0586Q9BVV6 1533 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 UGGT2Q9NYU1 1516 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 ABCA9Q8IUA7 1624 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 ITPR3Q14573 2671 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 DEFB131BA0A096LNP1 70 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 LYNX1G3V0Z9 82 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 IAPPP10997 89 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 CDC42BPGQ6DT37 1551 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 INO80Q9ULG1 1556 aaPredicted RBP-0.12□□□□□ -2.43
CD46-215ENST00000488596 C3P01024 1663 aa-0.12□□□□□ -2.43
CD46-215ENST00000488596 MUC17Q685J3 4493 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms