RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SPRR1AP35321 89 aa9.07□□□□□ -0.96
RER1-207ENST00000488353 UBE2BP63146 152 aa9.07□□□□□ -0.96
RER1-207ENST00000488353 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
RER1-207ENST00000488353 PLA2G2DQ9UNK4 145 aa9.07□□□□□ -0.96
RER1-207ENST00000488353 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
RER1-207ENST00000488353 CASC10Q5T4H9 136 aa9.06□□□□□ -0.96
RER1-207ENST00000488353 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
RER1-207ENST00000488353 SPANXA2-OT1Q8N9U9 137 aa9.06□□□□□ -0.96
RER1-207ENST00000488353 LINC00208Q96KT6 92 aa9.05□□□□□ -0.96
RER1-207ENST00000488353 UBE2AP49459 152 aa9.05□□□□□ -0.96
RER1-207ENST00000488353 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
RER1-207ENST00000488353 STAB2Q8WWQ8 2551 aa9.04□□□□□ -0.96
RER1-207ENST00000488353 Q8N9P0 234 aaPredicted RBP9.04□□□□□ -0.96
RER1-207ENST00000488353 A8MU10 97 aa9.03□□□□□ -0.96
RER1-207ENST00000488353 CHKB-CPT1BH3BT56 60 aa9.03□□□□□ -0.96
RER1-207ENST00000488353 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
RER1-207ENST00000488353 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
RER1-207ENST00000488353 COL7A1Q02388 2944 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 LINC00476Q8WZB0 136 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 H3BPC8 53 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
RER1-207ENST00000488353 MRPL55Q7Z7F7 128 aaKnown RBP9□□□□□ -0.97
RER1-207ENST00000488353 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
RER1-207ENST00000488353 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
RER1-207ENST00000488353 H0Y9P7 68 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 KTN1-AS1Q86SY8 53 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 LYSTQ99698 3801 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
RER1-207ENST00000488353 A0A087WSZ3 146 aa8.95□□□□□ -0.98
RER1-207ENST00000488353 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
RER1-207ENST00000488353 A0A0G2JQZ4 141 aa8.95□□□□□ -0.98
RER1-207ENST00000488353 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
RER1-207ENST00000488353 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
RER1-207ENST00000488353 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
RER1-207ENST00000488353 Q75L30 129 aa8.93□□□□□ -0.98
RER1-207ENST00000488353 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
RER1-207ENST00000488353 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
RER1-207ENST00000488353 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
RER1-207ENST00000488353 IGLV8-61A0A075B6I0 122 aa8.92□□□□□ -0.98
RER1-207ENST00000488353 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
RER1-207ENST00000488353 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
RER1-207ENST00000488353 LCA10Q71F78 164 aa8.91□□□□□ -0.98
RER1-207ENST00000488353 DNHD1Q96M86 4753 aa8.91□□□□□ -0.98
RER1-207ENST00000488353 A6NED7 52 aa8.9□□□□□ -0.98
RER1-207ENST00000488353 DNAH10Q8IVF4 4471 aa8.9□□□□□ -0.99
RER1-207ENST00000488353 TENM2Q9NT68 2774 aa8.89□□□□□ -0.99
RER1-207ENST00000488353 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
RER1-207ENST00000488353 NDUFS5O43920 106 aa8.89□□□□□ -0.99
RER1-207ENST00000488353 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
RER1-207ENST00000488353 CNBPP62633 177 aaKnown RBP8.88□□□□□ -0.99
RER1-207ENST00000488353 COA5Q86WW8 74 aa8.88□□□□□ -0.99
RER1-207ENST00000488353 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
RER1-207ENST00000488353 SRRM2Q9UQ35 2752 aaKnown RBP8.87□□□□□ -0.99
RER1-207ENST00000488353 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
RER1-207ENST00000488353 A8MWP4 228 aa8.87□□□□□ -0.99
RER1-207ENST00000488353 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
RER1-207ENST00000488353 KRTAP1-5Q9BYS1 174 aa8.86□□□□□ -0.99
RER1-207ENST00000488353 CSMD3Q7Z407 3707 aa8.86□□□□□ -0.99
RER1-207ENST00000488353 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
RER1-207ENST00000488353 A6NN06 94 aa8.85□□□□□ -0.99
RER1-207ENST00000488353 PRLHP81277 87 aa8.83□□□□□ -1
RER1-207ENST00000488353 A0A096LNI7 61 aa8.83□□□□□ -1
RER1-207ENST00000488353 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
RER1-207ENST00000488353 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
RER1-207ENST00000488353 UBE2DNLQ8IWF7 75 aa8.81□□□□□ -1
RER1-207ENST00000488353 APLNQ9ULZ1 77 aa8.8□□□□□ -1
RER1-207ENST00000488353 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
RER1-207ENST00000488353 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
RER1-207ENST00000488353 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
RER1-207ENST00000488353 H0Y9J4 135 aa8.76□□□□□ -1.01
RER1-207ENST00000488353 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
RER1-207ENST00000488353 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
RER1-207ENST00000488353 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
RER1-207ENST00000488353 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
RER1-207ENST00000488353 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
RER1-207ENST00000488353 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
RER1-207ENST00000488353 PCOTHQ58A44 107 aa8.74□□□□□ -1.01
RER1-207ENST00000488353 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
RER1-207ENST00000488353 MOBPQ13875 183 aa8.74□□□□□ -1.01
RER1-207ENST00000488353 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
RER1-207ENST00000488353 SPRR1BP22528 89 aa8.73□□□□□ -1.01
RER1-207ENST00000488353 DYNC2H1Q8NCM8 4307 aaKnown RBP8.71□□□□□ -1.01
RER1-207ENST00000488353 STARD9Q9P2P6 4700 aa8.69□□□□□ -1.02
RER1-207ENST00000488353 Q6ZR54 194 aa8.68□□□□□ -1.02
RER1-207ENST00000488353 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
RER1-207ENST00000488353 NUPR2A6NF83 97 aa8.67□□□□□ -1.02
RER1-207ENST00000488353 SPINK7P58062 85 aa8.67□□□□□ -1.02
RER1-207ENST00000488353 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
RER1-207ENST00000488353 HRES1P13985 223 aa8.65□□□□□ -1.02
RER1-207ENST00000488353 TGP01266 2768 aa8.63□□□□□ -1.03
RER1-207ENST00000488353 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
RER1-207ENST00000488353 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
RER1-207ENST00000488353 PANO1I0J062 215 aa8.61□□□□□ -1.03
RER1-207ENST00000488353 Q96NJ1 140 aa8.6□□□□□ -1.03
RER1-207ENST00000488353 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
RER1-207ENST00000488353 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms