RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
C9orf3-219ENST00000488186 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 A0A1B0GX51 115 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 F8WEM9 126 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 GHRHP01286 108 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 LINC01547P58512 204 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-219ENST00000488186 OCIAD2Q56VL3 154 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 Q8N377 158 aa9.17□□□□□ -0.94
C9orf3-219ENST00000488186 DNAL4O96015 105 aa9.16□□□□□ -0.94
C9orf3-219ENST00000488186 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
C9orf3-219ENST00000488186 FAM218AQ96MZ4 157 aa9.16□□□□□ -0.94
C9orf3-219ENST00000488186 SNHG12Q9BXW3 62 aa9.16□□□□□ -0.94
C9orf3-219ENST00000488186 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
C9orf3-219ENST00000488186 SMIM29Q86T20 159 aa9.13□□□□□ -0.95
C9orf3-219ENST00000488186 SPINK1P00995 79 aa9.11□□□□□ -0.95
C9orf3-219ENST00000488186 FABP2P12104 132 aa9.1□□□□□ -0.95
C9orf3-219ENST00000488186 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
C9orf3-219ENST00000488186 ORMDL1Q9P0S3 153 aa9.09□□□□□ -0.95
C9orf3-219ENST00000488186 H3BQ85 93 aa9.08□□□□□ -0.96
C9orf3-219ENST00000488186 PRR4Q16378 134 aa9.08□□□□□ -0.96
C9orf3-219ENST00000488186 HRCT1Q6UXD1 115 aa9.08□□□□□ -0.96
C9orf3-219ENST00000488186 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
C9orf3-219ENST00000488186 PCP4L1A6NKN8 68 aa9.05□□□□□ -0.96
C9orf3-219ENST00000488186 LST1O00453 97 aa9.05□□□□□ -0.96
C9orf3-219ENST00000488186 TRACP01848 142 aa9.05□□□□□ -0.96
C9orf3-219ENST00000488186 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
C9orf3-219ENST00000488186 Q6JHZ5 121 aa9.05□□□□□ -0.96
C9orf3-219ENST00000488186 H3BUT2 72 aa9.04□□□□□ -0.96
C9orf3-219ENST00000488186 TMEM256-PLSCR3K7ERE1 68 aa9.04□□□□□ -0.96
C9orf3-219ENST00000488186 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
C9orf3-219ENST00000488186 C9orf118A6NHY6 69 aa9.02□□□□□ -0.97
C9orf3-219ENST00000488186 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
C9orf3-219ENST00000488186 CD164Q04900 197 aa9.02□□□□□ -0.97
C9orf3-219ENST00000488186 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
C9orf3-219ENST00000488186 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
C9orf3-219ENST00000488186 H3BMG7 143 aa9.01□□□□□ -0.97
C9orf3-219ENST00000488186 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
C9orf3-219ENST00000488186 A0A0G2JQZ4 141 aa9□□□□□ -0.97
C9orf3-219ENST00000488186 TAX1BP3O14907 124 aa9□□□□□ -0.97
C9orf3-219ENST00000488186 TCL1BO95988 128 aa9□□□□□ -0.97
C9orf3-219ENST00000488186 TRBV20-1A0A075B6N2 111 aa8.99□□□□□ -0.97
C9orf3-219ENST00000488186 COL5A1-AS1Q5SY13 56 aa8.99□□□□□ -0.97
C9orf3-219ENST00000488186 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
C9orf3-219ENST00000488186 BAALC-AS2P0C853 105 aa8.97□□□□□ -0.97
C9orf3-219ENST00000488186 LRP2P98164 4655 aa8.96□□□□□ -0.97
C9orf3-219ENST00000488186 A0A1W2PPM0 123 aa8.96□□□□□ -0.98
C9orf3-219ENST00000488186 UBE2V1Q13404 147 aa8.96□□□□□ -0.98
C9orf3-219ENST00000488186 A0A1B0GV72 72 aa8.95□□□□□ -0.98
C9orf3-219ENST00000488186 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
C9orf3-219ENST00000488186 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
C9orf3-219ENST00000488186 ANKRD29Q8N6D5 301 aa8.94□□□□□ -0.98
C9orf3-219ENST00000488186 TRBV7-7A0A0K0K1E9 115 aa8.9□□□□□ -0.98
C9orf3-219ENST00000488186 C9JAW5 83 aa8.9□□□□□ -0.98
C9orf3-219ENST00000488186 RBM3P98179 157 aaKnown RBP8.9□□□□□ -0.98
C9orf3-219ENST00000488186 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
C9orf3-219ENST00000488186 Q5XG85 94 aa8.89□□□□□ -0.99
C9orf3-219ENST00000488186 DSCR8Q96T75 97 aa8.89□□□□□ -0.99
C9orf3-219ENST00000488186 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
C9orf3-219ENST00000488186 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
C9orf3-219ENST00000488186 Q6Q795 121 aa8.87□□□□□ -0.99
C9orf3-219ENST00000488186 JMJD7-PLA2G4BH0Y9G9 81 aa8.85□□□□□ -0.99
C9orf3-219ENST00000488186 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
C9orf3-219ENST00000488186 LPAP08519 4548 aa8.84□□□□□ -0.99
C9orf3-219ENST00000488186 CCKP06307 115 aa8.84□□□□□ -0.99
C9orf3-219ENST00000488186 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
C9orf3-219ENST00000488186 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
C9orf3-219ENST00000488186 C1orf195Q5TG92 126 aa8.83□□□□□ -1
C9orf3-219ENST00000488186 A0A087WSZ3 146 aa8.82□□□□□ -1
C9orf3-219ENST00000488186 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
C9orf3-219ENST00000488186 A0A1W2PNM2 257 aa8.82□□□□□ -1
C9orf3-219ENST00000488186 TPRXLQ17RH7 258 aa8.82□□□□□ -1
C9orf3-219ENST00000488186 H3BT86 120 aa8.81□□□□□ -1
C9orf3-219ENST00000488186 ASB16-AS1Q495Z4 193 aa8.81□□□□□ -1
C9orf3-219ENST00000488186 MTURNQ8N3F0 131 aa8.8□□□□□ -1
C9orf3-219ENST00000488186 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
C9orf3-219ENST00000488186 K7EP34 96 aa8.77□□□□□ -1.01
C9orf3-219ENST00000488186 PDE6GP18545 87 aa8.77□□□□□ -1.01
C9orf3-219ENST00000488186 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
C9orf3-219ENST00000488186 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
C9orf3-219ENST00000488186 C21orf62-AS1Q17RA5 79 aa8.74□□□□□ -1.01
C9orf3-219ENST00000488186 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
C9orf3-219ENST00000488186 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
C9orf3-219ENST00000488186 Q6ZQT0 140 aa8.72□□□□□ -1.01
C9orf3-219ENST00000488186 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
C9orf3-219ENST00000488186 A0A1B0GW54 56 aa8.68□□□□□ -1.02
C9orf3-219ENST00000488186 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
C9orf3-219ENST00000488186 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
C9orf3-219ENST00000488186 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
C9orf3-219ENST00000488186 F8W1H4 67 aa8.65□□□□□ -1.02
C9orf3-219ENST00000488186 Q96NJ1 140 aa8.65□□□□□ -1.02
C9orf3-219ENST00000488186 PRO0461Q9UI25 63 aa8.65□□□□□ -1.02
C9orf3-219ENST00000488186 RNF213Q63HN8 5207 aa8.65□□□□□ -1.03
C9orf3-219ENST00000488186 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
C9orf3-219ENST00000488186 XP32Q5T750 250 aa8.63□□□□□ -1.03
C9orf3-219ENST00000488186 LINC00472Q9H8W2 130 aa8.62□□□□□ -1.03
C9orf3-219ENST00000488186 NREPQ16612 68 aa8.61□□□□□ -1.03
C9orf3-219ENST00000488186 J3KT08 172 aa8.6□□□□□ -1.03
C9orf3-219ENST00000488186 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
C9orf3-219ENST00000488186 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
C9orf3-219ENST00000488186 NDUFB1O75438 58 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms