RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 M0R1W7 72 aa0.31□□□□□ -2.36
USP9X-208ENST00000487625 DEFB109BQ30KR1 87 aa0.31□□□□□ -2.36
USP9X-208ENST00000487625 ATP7AQ04656 1500 aa0.31□□□□□ -2.36
USP9X-208ENST00000487625 KMT2DO14686 5537 aa0.31□□□□□ -2.36
USP9X-208ENST00000487625 KIF21BO75037 1637 aa0.31□□□□□ -2.36
USP9X-208ENST00000487625 SPTBN1Q01082 2364 aaKnown RBP0.3□□□□□ -2.36
USP9X-208ENST00000487625 PLNP26678 52 aa0.3□□□□□ -2.36
USP9X-208ENST00000487625 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
USP9X-208ENST00000487625 NCBP2-AS2Q69YL0 99 aa0.3□□□□□ -2.36
USP9X-208ENST00000487625 TNXBP22105 4242 aa0.3□□□□□ -2.36
USP9X-208ENST00000487625 TOP2AP11388 1531 aaKnown RBP0.29□□□□□ -2.36
USP9X-208ENST00000487625 ALMS1Q8TCU4 4167 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 H0YGX0 51 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 IAPPP10997 89 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 KLK9Q2XQG4 91 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 FXYD6Q9H0Q3 95 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 TPRP12270 2363 aaKnown RBP0.29□□□□□ -2.36
USP9X-208ENST00000487625 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
USP9X-208ENST00000487625 F8P00451 2351 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 APCP25054 2843 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 CHD6Q8TD26 2715 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 DEFB130BP0DP73 79 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 DEFB130AP0DP74 79 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 FCER1GP30273 86 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 RPS27P42677 84 aaKnown RBP0.28□□□□□ -2.36
USP9X-208ENST00000487625 RPS27LQ71UM5 84 aaKnown RBP0.28□□□□□ -2.36
USP9X-208ENST00000487625 ANK2Q01484 3957 aa0.28□□□□□ -2.36
USP9X-208ENST00000487625 TRANK1O15050 2925 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 ZNF469Q96JG9 3925 aaPredicted RBP0.27□□□□□ -2.37
USP9X-208ENST00000487625 MYCBP2O75592 4640 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 SMIM27A0A1W2PRY6 76 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 MINOS1Q5TGZ0 78 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 TMEM167BQ9NRX6 74 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 C6orf48Q9UBA6 75 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 NFAT5O94916 1531 aa0.27□□□□□ -2.37
USP9X-208ENST00000487625 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
USP9X-208ENST00000487625 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
USP9X-208ENST00000487625 SPINK1P00995 79 aa0.26□□□□□ -2.37
USP9X-208ENST00000487625 U3KQA8 63 aa0.26□□□□□ -2.37
USP9X-208ENST00000487625 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
USP9X-208ENST00000487625 SAMD9LQ8IVG5 1584 aa0.26□□□□□ -2.37
USP9X-208ENST00000487625 DDX60Q8IY21 1712 aaKnown RBP0.26□□□□□ -2.37
USP9X-208ENST00000487625 PRRC2CQ9Y520 2896 aaKnown RBP0.26□□□□□ -2.37
USP9X-208ENST00000487625 AKAP6Q13023 2319 aa0.25□□□□□ -2.37
USP9X-208ENST00000487625 PKDREJQ9NTG1 2253 aa0.25□□□□□ -2.37
USP9X-208ENST00000487625 PRM1P04553 51 aa0.25□□□□□ -2.37
USP9X-208ENST00000487625 WT1-ASQ06250 92 aa0.25□□□□□ -2.37
USP9X-208ENST00000487625 DSPP15924 2871 aaKnown RBP0.25□□□□□ -2.37
USP9X-208ENST00000487625 ATRQ13535 2644 aa0.25□□□□□ -2.37
USP9X-208ENST00000487625 PRKDCP78527 4128 aaKnown RBP0.24□□□□□ -2.37
USP9X-208ENST00000487625 TRPM2O94759 1503 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 EP300Q09472 2414 aaPredicted RBP0.24□□□□□ -2.37
USP9X-208ENST00000487625 M0R2T5 61 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 SPRR2DP22532 72 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 LINC00308Q8TCZ7 52 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 ABCA2Q9BZC7 2435 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 KNL1Q8NG31 2342 aa0.24□□□□□ -2.37
USP9X-208ENST00000487625 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
USP9X-208ENST00000487625 NCOR1O75376 2440 aa0.23□□□□□ -2.37
USP9X-208ENST00000487625 AKAP13Q12802 2813 aa0.23□□□□□ -2.37
USP9X-208ENST00000487625 PRLHP81277 87 aa0.23□□□□□ -2.37
USP9X-208ENST00000487625 ABRACLQ9P1F3 81 aa0.23□□□□□ -2.37
USP9X-208ENST00000487625 S4R3F8 94 aa0.23□□□□□ -2.37
USP9X-208ENST00000487625 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 UNC79Q9P2D8 2635 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 FAT2Q9NYQ8 4349 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 SPTA1P02549 2419 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 H3BUA1 57 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 ZFYVE26Q68DK2 2539 aa0.22□□□□□ -2.37
USP9X-208ENST00000487625 PKD1L1Q8TDX9 2849 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 CLTCL1P53675 1640 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 IGF2RP11717 2491 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 SPRR2BP35325 72 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 TOMM5Q8N4H5 51 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 PCNX1Q96RV3 2341 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 A0A0C4DFX4 3053 aa0.21□□□□□ -2.38
USP9X-208ENST00000487625 LPAP08519 4548 aa0.2□□□□□ -2.38
USP9X-208ENST00000487625 CACNA1AO00555 2505 aa0.2□□□□□ -2.38
USP9X-208ENST00000487625 PTPN13Q12923 2485 aa0.2□□□□□ -2.38
USP9X-208ENST00000487625 HIVEP3Q5T1R4 2406 aa0.2□□□□□ -2.38
USP9X-208ENST00000487625 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
USP9X-208ENST00000487625 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
USP9X-208ENST00000487625 PHGR1C9JFL3 82 aa0.19□□□□□ -2.38
USP9X-208ENST00000487625 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
USP9X-208ENST00000487625 CHD8Q9HCK8 2581 aa0.19□□□□□ -2.38
USP9X-208ENST00000487625 DUOX1Q9NRD9 1551 aa0.19□□□□□ -2.38
USP9X-208ENST00000487625 TNRC18O15417 2968 aaPredicted RBP0.18□□□□□ -2.38
USP9X-208ENST00000487625 PKD1P98161 4303 aa0.18□□□□□ -2.38
USP9X-208ENST00000487625 IGLV5-48A0A075B6I7 105 aa0.18□□□□□ -2.38
USP9X-208ENST00000487625 HECTD1Q9ULT8 2610 aa0.18□□□□□ -2.38
USP9X-208ENST00000487625 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
USP9X-208ENST00000487625 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
USP9X-208ENST00000487625 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
USP9X-208ENST00000487625 SMIM2Q9BVW6 85 aa0.17□□□□□ -2.38
USP9X-208ENST00000487625 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
USP9X-208ENST00000487625 TIMM8BQ9Y5J9 83 aaPredicted RBP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms