RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 HRES1P13985 223 aa9.13□□□□□ -0.95
EPHB4-206ENST00000487222 TNP2Q05952 138 aa9.12□□□□□ -0.95
EPHB4-206ENST00000487222 Q75L30 129 aa9.12□□□□□ -0.95
EPHB4-206ENST00000487222 A0A0D9SG42 100 aa9.12□□□□□ -0.95
EPHB4-206ENST00000487222 WDFY4Q6ZS81 3184 aa9.12□□□□□ -0.95
EPHB4-206ENST00000487222 A0A0C4DFX4 3053 aa9.11□□□□□ -0.95
EPHB4-206ENST00000487222 LAMA2P24043 3122 aaKnown RBP9.09□□□□□ -0.95
EPHB4-206ENST00000487222 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
EPHB4-206ENST00000487222 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
EPHB4-206ENST00000487222 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
EPHB4-206ENST00000487222 SPRR1BP22528 89 aa9.07□□□□□ -0.96
EPHB4-206ENST00000487222 UNC79Q9P2D8 2635 aa9.07□□□□□ -0.96
EPHB4-206ENST00000487222 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
EPHB4-206ENST00000487222 DSPP15924 2871 aaKnown RBP9.06□□□□□ -0.96
EPHB4-206ENST00000487222 LINC01554Q52M75 96 aa9.05□□□□□ -0.96
EPHB4-206ENST00000487222 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
EPHB4-206ENST00000487222 A0A1B0GU33 70 aa9.04□□□□□ -0.96
EPHB4-206ENST00000487222 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
EPHB4-206ENST00000487222 GCN1Q92616 2671 aaKnown RBP9.04□□□□□ -0.96
EPHB4-206ENST00000487222 BRCA2P51587 3418 aa9.03□□□□□ -0.96
EPHB4-206ENST00000487222 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
EPHB4-206ENST00000487222 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
EPHB4-206ENST00000487222 OXTP01178 125 aa9.02□□□□□ -0.96
EPHB4-206ENST00000487222 PRUNE2Q8WUY3 3088 aa9.01□□□□□ -0.97
EPHB4-206ENST00000487222 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
EPHB4-206ENST00000487222 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
EPHB4-206ENST00000487222 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
EPHB4-206ENST00000487222 Q5VV11 94 aa8.95□□□□□ -0.98
EPHB4-206ENST00000487222 Q6ZSA8 131 aa8.95□□□□□ -0.98
EPHB4-206ENST00000487222 UBR5O95071 2799 aaPredicted RBP8.94□□□□□ -0.98
EPHB4-206ENST00000487222 TRIOO75962 3097 aa8.94□□□□□ -0.98
EPHB4-206ENST00000487222 Q5W150 140 aa8.94□□□□□ -0.98
EPHB4-206ENST00000487222 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
EPHB4-206ENST00000487222 VPS13AQ96RL7 3174 aa8.88□□□□□ -0.99
EPHB4-206ENST00000487222 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
EPHB4-206ENST00000487222 LUZP6Q538Z0 58 aa8.87□□□□□ -0.99
EPHB4-206ENST00000487222 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
EPHB4-206ENST00000487222 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
EPHB4-206ENST00000487222 SPINK7P58062 85 aa8.86□□□□□ -0.99
EPHB4-206ENST00000487222 XIRP2A4UGR9 3374 aa8.85□□□□□ -0.99
EPHB4-206ENST00000487222 PRAC1Q96KF2 57 aa8.83□□□□□ -1
EPHB4-206ENST00000487222 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
EPHB4-206ENST00000487222 BAHCC1Q9P281 2608 aa8.82□□□□□ -1
EPHB4-206ENST00000487222 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
EPHB4-206ENST00000487222 FRYQ5TBA9 3013 aa8.82□□□□□ -1
EPHB4-206ENST00000487222 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
EPHB4-206ENST00000487222 CSAG1Q6PB30 78 aa8.82□□□□□ -1
EPHB4-206ENST00000487222 LINC00483Q53H64 154 aa8.78□□□□□ -1
EPHB4-206ENST00000487222 S4R3F8 94 aa8.77□□□□□ -1.01
EPHB4-206ENST00000487222 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
EPHB4-206ENST00000487222 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
EPHB4-206ENST00000487222 Q6ZR54 194 aa8.76□□□□□ -1.01
EPHB4-206ENST00000487222 FLNCQ14315 2725 aa8.74□□□□□ -1.01
EPHB4-206ENST00000487222 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
EPHB4-206ENST00000487222 ITPR1Q14643 2758 aa8.73□□□□□ -1.01
EPHB4-206ENST00000487222 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
EPHB4-206ENST00000487222 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
EPHB4-206ENST00000487222 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
EPHB4-206ENST00000487222 PANO1I0J062 215 aa8.66□□□□□ -1.02
EPHB4-206ENST00000487222 KRTAP10-2P60368 255 aa8.66□□□□□ -1.02
EPHB4-206ENST00000487222 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
EPHB4-206ENST00000487222 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
EPHB4-206ENST00000487222 H3BS24 57 aa8.65□□□□□ -1.02
EPHB4-206ENST00000487222 LCE6AA0A183 80 aa8.64□□□□□ -1.03
EPHB4-206ENST00000487222 TACC2O95359 2948 aa8.64□□□□□ -1.03
EPHB4-206ENST00000487222 R4GN34 69 aa8.64□□□□□ -1.03
EPHB4-206ENST00000487222 ATMQ13315 3056 aa8.62□□□□□ -1.03
EPHB4-206ENST00000487222 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
EPHB4-206ENST00000487222 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
EPHB4-206ENST00000487222 M0R2T5 61 aa8.6□□□□□ -1.03
EPHB4-206ENST00000487222 ROMO1P60602 79 aa8.59□□□□□ -1.03
EPHB4-206ENST00000487222 KALRNO60229 2985 aa8.58□□□□□ -1.04
EPHB4-206ENST00000487222 COL12A1Q99715 3063 aa8.57□□□□□ -1.04
EPHB4-206ENST00000487222 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
EPHB4-206ENST00000487222 Q5VSD8 79 aa8.57□□□□□ -1.04
EPHB4-206ENST00000487222 FRYLO94915 3013 aa8.57□□□□□ -1.04
EPHB4-206ENST00000487222 CELSR3Q9NYQ7 3312 aa8.56□□□□□ -1.04
EPHB4-206ENST00000487222 FREM2Q5SZK8 3169 aa8.55□□□□□ -1.04
EPHB4-206ENST00000487222 A0A087X002 238 aa8.54□□□□□ -1.04
EPHB4-206ENST00000487222 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
EPHB4-206ENST00000487222 LAMA1P25391 3075 aa8.52□□□□□ -1.05
EPHB4-206ENST00000487222 DMXL2Q8TDJ6 3036 aa8.51□□□□□ -1.05
EPHB4-206ENST00000487222 ADGRG4Q8IZF6 3080 aa8.51□□□□□ -1.05
EPHB4-206ENST00000487222 NBEAQ8NFP9 2946 aa8.5□□□□□ -1.05
EPHB4-206ENST00000487222 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
EPHB4-206ENST00000487222 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
EPHB4-206ENST00000487222 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
EPHB4-206ENST00000487222 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
EPHB4-206ENST00000487222 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
EPHB4-206ENST00000487222 SZT2Q5T011 3432 aa8.48□□□□□ -1.05
EPHB4-206ENST00000487222 A0A0A0MQY5 61 aa8.47□□□□□ -1.05
EPHB4-206ENST00000487222 M0QZ58 72 aa8.47□□□□□ -1.05
EPHB4-206ENST00000487222 A6NN06 94 aa8.47□□□□□ -1.05
EPHB4-206ENST00000487222 VCANP13611 3396 aa8.45□□□□□ -1.06
EPHB4-206ENST00000487222 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
EPHB4-206ENST00000487222 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
EPHB4-206ENST00000487222 NIPBLQ6KC79 2804 aaeCLIP8.44□□□□□ -1.06
EPHB4-206ENST00000487222 BOD1L1Q8NFC6 3051 aa8.44□□□□□ -1.06
EPHB4-206ENST00000487222 REV3LO60673 3130 aa8.44□□□□□ -1.06
EPHB4-206ENST00000487222 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms