RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
MCF2L-227ENST00000486806 DEFB105AQ8NG35 78 aa5.67□□□□□ -1.5
MCF2L-227ENST00000486806 LINC01600Q96MT4 127 aa5.67□□□□□ -1.5
MCF2L-227ENST00000486806 ORMDL1Q9P0S3 153 aa5.67□□□□□ -1.5
MCF2L-227ENST00000486806 H3BMG7 143 aa5.66□□□□□ -1.5
MCF2L-227ENST00000486806 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
MCF2L-227ENST00000486806 GHRHP01286 108 aa5.65□□□□□ -1.5
MCF2L-227ENST00000486806 CRYGAP11844 174 aa5.65□□□□□ -1.5
MCF2L-227ENST00000486806 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.5
MCF2L-227ENST00000486806 H3BQ85 93 aa5.64□□□□□ -1.51
MCF2L-227ENST00000486806 OXTP01178 125 aa5.64□□□□□ -1.51
MCF2L-227ENST00000486806 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
MCF2L-227ENST00000486806 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
MCF2L-227ENST00000486806 C9JAW5 83 aa5.63□□□□□ -1.51
MCF2L-227ENST00000486806 TMEM256-PLSCR3K7ERE1 68 aa5.63□□□□□ -1.51
MCF2L-227ENST00000486806 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
MCF2L-227ENST00000486806 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
MCF2L-227ENST00000486806 IGLV8-61A0A075B6I0 122 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 IGLV9-49A0A0B4J1Y8 123 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 H3BT86 120 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 MOBPQ13875 183 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 GTF2H5Q6ZYL4 71 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 Q8NBF4 154 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 PRO0461Q9UI25 63 aa5.62□□□□□ -1.51
MCF2L-227ENST00000486806 A0A1B0GV90 55 aa5.61□□□□□ -1.51
MCF2L-227ENST00000486806 NDUFV3P56181 108 aaKnown RBP5.61□□□□□ -1.51
MCF2L-227ENST00000486806 MTURNQ8N3F0 131 aa5.61□□□□□ -1.51
MCF2L-227ENST00000486806 F8WEM9 126 aa5.6□□□□□ -1.51
MCF2L-227ENST00000486806 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
MCF2L-227ENST00000486806 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
MCF2L-227ENST00000486806 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
MCF2L-227ENST00000486806 ANKRD29Q8N6D5 301 aa5.59□□□□□ -1.51
MCF2L-227ENST00000486806 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
MCF2L-227ENST00000486806 Q6JHZ5 121 aa5.57□□□□□ -1.52
MCF2L-227ENST00000486806 IGFL1Q6UW32 110 aa5.57□□□□□ -1.52
MCF2L-227ENST00000486806 OBSCN-AS1Q96MR7 158 aa5.57□□□□□ -1.52
MCF2L-227ENST00000486806 A0A0G2JQZ4 141 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 A0A1B0GV72 72 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 F8W1H4 67 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
MCF2L-227ENST00000486806 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
MCF2L-227ENST00000486806 CD164Q04900 197 aa5.53□□□□□ -1.52
MCF2L-227ENST00000486806 LOC110117498A0A087WWA1 95 aa5.52□□□□□ -1.53
MCF2L-227ENST00000486806 J3QL48 77 aa5.52□□□□□ -1.53
MCF2L-227ENST00000486806 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
MCF2L-227ENST00000486806 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
MCF2L-227ENST00000486806 Q6Q795 121 aa5.52□□□□□ -1.53
MCF2L-227ENST00000486806 A0A1W2PNM2 257 aa5.51□□□□□ -1.53
MCF2L-227ENST00000486806 SPINK1P00995 79 aa5.51□□□□□ -1.53
MCF2L-227ENST00000486806 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
MCF2L-227ENST00000486806 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
MCF2L-227ENST00000486806 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
MCF2L-227ENST00000486806 HERC1Q15751 4861 aa5.5□□□□□ -1.53
MCF2L-227ENST00000486806 Q6ZQT0 140 aa5.5□□□□□ -1.53
MCF2L-227ENST00000486806 TRBV7-7A0A0K0K1E9 115 aa5.49□□□□□ -1.53
MCF2L-227ENST00000486806 PDE6GP18545 87 aa5.49□□□□□ -1.53
MCF2L-227ENST00000486806 ETDBQ3ZM63 59 aa5.49□□□□□ -1.53
MCF2L-227ENST00000486806 HRCT1Q6UXD1 115 aa5.49□□□□□ -1.53
MCF2L-227ENST00000486806 CCKP06307 115 aa5.48□□□□□ -1.53
MCF2L-227ENST00000486806 C4orf48Q5BLP8 95 aa5.48□□□□□ -1.53
MCF2L-227ENST00000486806 Q5XG85 94 aa5.48□□□□□ -1.53
MCF2L-227ENST00000486806 C21orf62-AS1Q17RA5 79 aa5.47□□□□□ -1.53
MCF2L-227ENST00000486806 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
MCF2L-227ENST00000486806 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
MCF2L-227ENST00000486806 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.54
MCF2L-227ENST00000486806 A0A087WSZ3 146 aa5.45□□□□□ -1.54
MCF2L-227ENST00000486806 VPS25Q9BRG1 176 aa5.45□□□□□ -1.54
MCF2L-227ENST00000486806 A0A1B0GW54 56 aa5.44□□□□□ -1.54
MCF2L-227ENST00000486806 ASB16-AS1Q495Z4 193 aa5.44□□□□□ -1.54
MCF2L-227ENST00000486806 SS18L2Q9UHA2 77 aa5.43□□□□□ -1.54
MCF2L-227ENST00000486806 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
MCF2L-227ENST00000486806 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
MCF2L-227ENST00000486806 Q96NJ1 140 aa5.4□□□□□ -1.54
MCF2L-227ENST00000486806 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
MCF2L-227ENST00000486806 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
MCF2L-227ENST00000486806 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
MCF2L-227ENST00000486806 LINC00846Q9NV44 126 aa5.37□□□□□ -1.55
MCF2L-227ENST00000486806 Q6ZVQ6 151 aa5.34□□□□□ -1.55
MCF2L-227ENST00000486806 LPAP08519 4548 aa5.33□□□□□ -1.56
MCF2L-227ENST00000486806 ACYP1P07311 99 aa5.33□□□□□ -1.56
MCF2L-227ENST00000486806 PRR4Q16378 134 aa5.33□□□□□ -1.56
MCF2L-227ENST00000486806 NREPQ16612 68 aa5.33□□□□□ -1.56
MCF2L-227ENST00000486806 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
MCF2L-227ENST00000486806 DEFB116Q30KQ4 102 aa5.32□□□□□ -1.56
MCF2L-227ENST00000486806 UBL5Q9BZL1 73 aa5.32□□□□□ -1.56
MCF2L-227ENST00000486806 J3KT08 172 aa5.31□□□□□ -1.56
MCF2L-227ENST00000486806 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
MCF2L-227ENST00000486806 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
MCF2L-227ENST00000486806 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
MCF2L-227ENST00000486806 J3QR89 54 aa5.3□□□□□ -1.56
MCF2L-227ENST00000486806 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
MCF2L-227ENST00000486806 LRP2P98164 4655 aa5.29□□□□□ -1.56
MCF2L-227ENST00000486806 A8MWP4 228 aa5.28□□□□□ -1.56
MCF2L-227ENST00000486806 DSCR10P59022 87 aa5.28□□□□□ -1.56
MCF2L-227ENST00000486806 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms