RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RTL8CO15255 209 aa8.53□□□□□ -1.04
HMGN1-216ENST00000486741 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
HMGN1-216ENST00000486741 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-216ENST00000486741 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
HMGN1-216ENST00000486741 IGHV6-1A0A0B4J1U7 121 aa8.51□□□□□ -1.05
HMGN1-216ENST00000486741 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
HMGN1-216ENST00000486741 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
HMGN1-216ENST00000486741 MOBPQ13875 183 aa8.5□□□□□ -1.05
HMGN1-216ENST00000486741 H7BZZ5 65 aa8.49□□□□□ -1.05
HMGN1-216ENST00000486741 TLX1NBP0CAT3 122 aa8.49□□□□□ -1.05
HMGN1-216ENST00000486741 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
HMGN1-216ENST00000486741 CASC2Q6XLA1 102 aa8.49□□□□□ -1.05
HMGN1-216ENST00000486741 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
HMGN1-216ENST00000486741 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
HMGN1-216ENST00000486741 C9orf163Q8N9P6 203 aa8.47□□□□□ -1.05
HMGN1-216ENST00000486741 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
HMGN1-216ENST00000486741 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
HMGN1-216ENST00000486741 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.05
HMGN1-216ENST00000486741 IGFL1Q6UW32 110 aa8.44□□□□□ -1.06
HMGN1-216ENST00000486741 K7EQZ3 153 aa8.44□□□□□ -1.06
HMGN1-216ENST00000486741 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
HMGN1-216ENST00000486741 A8MUN3 132 aa8.44□□□□□ -1.06
HMGN1-216ENST00000486741 A0A087WTM6 91 aa8.43□□□□□ -1.06
HMGN1-216ENST00000486741 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
HMGN1-216ENST00000486741 BCE1O60756 84 aa8.43□□□□□ -1.06
HMGN1-216ENST00000486741 RETNLBQ9BQ08 111 aa8.43□□□□□ -1.06
HMGN1-216ENST00000486741 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
HMGN1-216ENST00000486741 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
HMGN1-216ENST00000486741 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
HMGN1-216ENST00000486741 Q5XG85 94 aa8.4□□□□□ -1.06
HMGN1-216ENST00000486741 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.07
HMGN1-216ENST00000486741 H0Y9P7 68 aa8.38□□□□□ -1.07
HMGN1-216ENST00000486741 TRRAPQ9Y4A5 3859 aa8.37□□□□□ -1.07
HMGN1-216ENST00000486741 OXTP01178 125 aa8.36□□□□□ -1.07
HMGN1-216ENST00000486741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-216ENST00000486741 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
HMGN1-216ENST00000486741 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
HMGN1-216ENST00000486741 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
HMGN1-216ENST00000486741 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-216ENST00000486741 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
HMGN1-216ENST00000486741 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
HMGN1-216ENST00000486741 CD164Q04900 197 aa8.33□□□□□ -1.08
HMGN1-216ENST00000486741 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
HMGN1-216ENST00000486741 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
HMGN1-216ENST00000486741 A0A1B0GW54 56 aa8.32□□□□□ -1.08
HMGN1-216ENST00000486741 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
HMGN1-216ENST00000486741 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
HMGN1-216ENST00000486741 TNP2Q05952 138 aa8.31□□□□□ -1.08
HMGN1-216ENST00000486741 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
HMGN1-216ENST00000486741 TRAV22A0A0B4J277 110 aa8.29□□□□□ -1.08
HMGN1-216ENST00000486741 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-216ENST00000486741 ZNF861PO60384 105 aa8.27□□□□□ -1.09
HMGN1-216ENST00000486741 SPRR1AP35321 89 aa8.26□□□□□ -1.09
HMGN1-216ENST00000486741 PANO1I0J062 215 aa8.25□□□□□ -1.09
HMGN1-216ENST00000486741 A8MWP4 228 aa8.24□□□□□ -1.09
HMGN1-216ENST00000486741 ANK3Q12955 4377 aaKnown RBP8.24□□□□□ -1.09
HMGN1-216ENST00000486741 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-216ENST00000486741 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
HMGN1-216ENST00000486741 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
HMGN1-216ENST00000486741 DSCR10P59022 87 aa8.22□□□□□ -1.09
HMGN1-216ENST00000486741 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.09
HMGN1-216ENST00000486741 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
HMGN1-216ENST00000486741 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
HMGN1-216ENST00000486741 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
HMGN1-216ENST00000486741 KRTAP7-1Q8IUC3 87 aa8.19□□□□□ -1.1
HMGN1-216ENST00000486741 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
HMGN1-216ENST00000486741 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
HMGN1-216ENST00000486741 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
HMGN1-216ENST00000486741 TGP01266 2768 aa8.17□□□□□ -1.1
HMGN1-216ENST00000486741 KRTAP4-16G5E9R7 235 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-216ENST00000486741 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
HMGN1-216ENST00000486741 OCR1Q9BZK8 76 aa8.14□□□□□ -1.11
HMGN1-216ENST00000486741 C8orf17Q9NRJ1 99 aa8.14□□□□□ -1.11
HMGN1-216ENST00000486741 SPINK1P00995 79 aa8.12□□□□□ -1.11
HMGN1-216ENST00000486741 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
HMGN1-216ENST00000486741 RBM12B-AS1Q9P1G2 102 aa8.12□□□□□ -1.11
HMGN1-216ENST00000486741 LINC00313P59037 77 aa8.12□□□□□ -1.11
HMGN1-216ENST00000486741 COA5Q86WW8 74 aa8.12□□□□□ -1.11
HMGN1-216ENST00000486741 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
HMGN1-216ENST00000486741 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
HMGN1-216ENST00000486741 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
HMGN1-216ENST00000486741 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
HMGN1-216ENST00000486741 K7ERS5 55 aa8.09□□□□□ -1.11
HMGN1-216ENST00000486741 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
HMGN1-216ENST00000486741 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
HMGN1-216ENST00000486741 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
HMGN1-216ENST00000486741 A0A1B0GU69 56 aa8.08□□□□□ -1.12
HMGN1-216ENST00000486741 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
HMGN1-216ENST00000486741 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
HMGN1-216ENST00000486741 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
HMGN1-216ENST00000486741 LCA10Q71F78 164 aa8.06□□□□□ -1.12
HMGN1-216ENST00000486741 Q96NJ1 140 aa8.05□□□□□ -1.12
HMGN1-216ENST00000486741 PLAC8Q9NZF1 115 aa8.05□□□□□ -1.12
HMGN1-216ENST00000486741 Q1T7F1 81 aa8.03□□□□□ -1.12
HMGN1-216ENST00000486741 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-216ENST00000486741 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.12
HMGN1-216ENST00000486741 H3BPC8 53 aa8.01□□□□□ -1.13
HMGN1-216ENST00000486741 SPRR1BP22528 89 aa8□□□□□ -1.13
HMGN1-216ENST00000486741 H3BS24 57 aa8□□□□□ -1.13
HMGN1-216ENST00000486741 Q6ZR54 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms