RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
VIM-205ENST00000485947 H3BQ85 93 aa10.29□□□□□ -0.76
VIM-205ENST00000485947 H3BT86 120 aa10.28□□□□□ -0.76
VIM-205ENST00000485947 Q6ZQY7 126 aa10.28□□□□□ -0.76
VIM-205ENST00000485947 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
VIM-205ENST00000485947 F8W1H4 67 aa10.27□□□□□ -0.77
VIM-205ENST00000485947 HIGD2AQ9BW72 106 aa10.27□□□□□ -0.77
VIM-205ENST00000485947 ZNF861PO60384 105 aa10.26□□□□□ -0.77
VIM-205ENST00000485947 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
VIM-205ENST00000485947 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
VIM-205ENST00000485947 TMEM256-PLSCR3K7ERE1 68 aa10.23□□□□□ -0.77
VIM-205ENST00000485947 ERC2-IT1O76042 136 aa10.23□□□□□ -0.77
VIM-205ENST00000485947 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
VIM-205ENST00000485947 ANKRD29Q8N6D5 301 aa10.23□□□□□ -0.77
VIM-205ENST00000485947 TNXBP22105 4242 aa10.22□□□□□ -0.77
VIM-205ENST00000485947 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
VIM-205ENST00000485947 IGLV5-48A0A075B6I7 105 aa10.21□□□□□ -0.77
VIM-205ENST00000485947 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
VIM-205ENST00000485947 ZNF706Q9Y5V0 76 aaPredicted RBP10.2□□□□□ -0.78
VIM-205ENST00000485947 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
VIM-205ENST00000485947 ST20-AS1Q8NBB2 130 aa10.18□□□□□ -0.78
VIM-205ENST00000485947 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
VIM-205ENST00000485947 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
VIM-205ENST00000485947 SPRR1BP22528 89 aa10.16□□□□□ -0.78
VIM-205ENST00000485947 Q8N377 158 aa10.16□□□□□ -0.78
VIM-205ENST00000485947 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
VIM-205ENST00000485947 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
VIM-205ENST00000485947 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
VIM-205ENST00000485947 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
VIM-205ENST00000485947 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
VIM-205ENST00000485947 JMJD7-PLA2G4BH0Y9G9 81 aa10.11□□□□□ -0.79
VIM-205ENST00000485947 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
VIM-205ENST00000485947 LINC00483Q53H64 154 aa10.11□□□□□ -0.79
VIM-205ENST00000485947 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
VIM-205ENST00000485947 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
VIM-205ENST00000485947 SMIM29Q86T20 159 aa10.08□□□□□ -0.8
VIM-205ENST00000485947 OBSCN-AS1Q96MR7 158 aa10.08□□□□□ -0.8
VIM-205ENST00000485947 F8WEM9 126 aa10.07□□□□□ -0.8
VIM-205ENST00000485947 LCE2BO14633 110 aa10.07□□□□□ -0.8
VIM-205ENST00000485947 RBM3P98179 157 aaKnown RBP10.05□□□□□ -0.8
VIM-205ENST00000485947 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
VIM-205ENST00000485947 KRTAP9-2Q9BYQ4 174 aa10.05□□□□□ -0.8
VIM-205ENST00000485947 CRYGAP11844 174 aa10.04□□□□□ -0.8
VIM-205ENST00000485947 IGLV8-61A0A075B6I0 122 aa10.03□□□□□ -0.8
VIM-205ENST00000485947 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.81
VIM-205ENST00000485947 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
VIM-205ENST00000485947 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
VIM-205ENST00000485947 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
VIM-205ENST00000485947 PDE6GP18545 87 aa10□□□□□ -0.81
VIM-205ENST00000485947 LOC110117498A0A087WWA1 95 aa9.99□□□□□ -0.81
VIM-205ENST00000485947 A0A1B0GV72 72 aa9.99□□□□□ -0.81
VIM-205ENST00000485947 C14orf132Q9NPU4 83 aa9.99□□□□□ -0.81
VIM-205ENST00000485947 Q6JHZ5 121 aa9.98□□□□□ -0.81
VIM-205ENST00000485947 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
VIM-205ENST00000485947 A0A087X002 238 aa9.97□□□□□ -0.81
VIM-205ENST00000485947 Q8NBF4 154 aa9.97□□□□□ -0.81
VIM-205ENST00000485947 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
VIM-205ENST00000485947 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
VIM-205ENST00000485947 J3QR89 54 aa9.95□□□□□ -0.82
VIM-205ENST00000485947 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
VIM-205ENST00000485947 Q6ZQT0 140 aa9.95□□□□□ -0.82
VIM-205ENST00000485947 KRTAP9-6A0A140TA67 174 aa9.93□□□□□ -0.82
VIM-205ENST00000485947 CCKP06307 115 aa9.93□□□□□ -0.82
VIM-205ENST00000485947 MOBPQ13875 183 aa9.93□□□□□ -0.82
VIM-205ENST00000485947 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
VIM-205ENST00000485947 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
VIM-205ENST00000485947 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
VIM-205ENST00000485947 K7ERU9 68 aa9.89□□□□□ -0.83
VIM-205ENST00000485947 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
VIM-205ENST00000485947 A0A1B0GW54 56 aa9.88□□□□□ -0.83
VIM-205ENST00000485947 PRR4Q16378 134 aa9.88□□□□□ -0.83
VIM-205ENST00000485947 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
VIM-205ENST00000485947 Q6Q795 121 aa9.87□□□□□ -0.83
VIM-205ENST00000485947 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
VIM-205ENST00000485947 A0A1W2PNM2 257 aa9.86□□□□□ -0.83
VIM-205ENST00000485947 ACYP1P07311 99 aa9.86□□□□□ -0.83
VIM-205ENST00000485947 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
VIM-205ENST00000485947 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
VIM-205ENST00000485947 LPAP08519 4548 aa9.83□□□□□ -0.84
VIM-205ENST00000485947 CD164Q04900 197 aa9.83□□□□□ -0.84
VIM-205ENST00000485947 A0A0G2JQZ4 141 aa9.82□□□□□ -0.84
VIM-205ENST00000485947 FAT4Q6V0I7 4981 aa9.78□□□□□ -0.84
VIM-205ENST00000485947 TRBV7-7A0A0K0K1E9 115 aa9.78□□□□□ -0.84
VIM-205ENST00000485947 MUC2Q02817 5179 aa9.76□□□□□ -0.85
VIM-205ENST00000485947 LINC00846Q9NV44 126 aa9.75□□□□□ -0.85
VIM-205ENST00000485947 A0A087WSZ3 146 aa9.74□□□□□ -0.85
VIM-205ENST00000485947 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
VIM-205ENST00000485947 UBL5Q9BZL1 73 aa9.74□□□□□ -0.85
VIM-205ENST00000485947 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
VIM-205ENST00000485947 SPINK1P00995 79 aa9.72□□□□□ -0.85
VIM-205ENST00000485947 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
VIM-205ENST00000485947 TPRXLQ17RH7 258 aa9.71□□□□□ -0.86
VIM-205ENST00000485947 NREPQ16612 68 aa9.7□□□□□ -0.86
VIM-205ENST00000485947 Q5XG85 94 aa9.7□□□□□ -0.86
VIM-205ENST00000485947 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
VIM-205ENST00000485947 LIMD2Q9BT23 127 aa9.7□□□□□ -0.86
VIM-205ENST00000485947 Q6ZVQ6 151 aa9.69□□□□□ -0.86
VIM-205ENST00000485947 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
VIM-205ENST00000485947 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
VIM-205ENST00000485947 RETNLBQ9BQ08 111 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms