RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 PSMB2P49721 201 aa8.91□□□□□ -0.98
HDHD3-203ENST00000485934 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
HDHD3-203ENST00000485934 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
HDHD3-203ENST00000485934 PRR4Q16378 134 aa8.89□□□□□ -0.99
HDHD3-203ENST00000485934 Q8N377 158 aa8.89□□□□□ -0.99
HDHD3-203ENST00000485934 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
HDHD3-203ENST00000485934 H3BQ85 93 aa8.86□□□□□ -0.99
HDHD3-203ENST00000485934 CD164Q04900 197 aa8.86□□□□□ -0.99
HDHD3-203ENST00000485934 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
HDHD3-203ENST00000485934 K7ERJ3 54 aa8.85□□□□□ -0.99
HDHD3-203ENST00000485934 TRIAP1O43715 76 aa8.85□□□□□ -0.99
HDHD3-203ENST00000485934 DNAL4O96015 105 aa8.84□□□□□ -0.99
HDHD3-203ENST00000485934 LIMD2Q9BT23 127 aa8.84□□□□□ -0.99
HDHD3-203ENST00000485934 SCGB1C2P0DMR2 95 aa8.83□□□□□ -1
HDHD3-203ENST00000485934 Q6JHZ5 121 aa8.83□□□□□ -1
HDHD3-203ENST00000485934 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
HDHD3-203ENST00000485934 FAM218AQ96MZ4 157 aa8.81□□□□□ -1
HDHD3-203ENST00000485934 IGLV8-61A0A075B6I0 122 aa8.78□□□□□ -1
HDHD3-203ENST00000485934 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
HDHD3-203ENST00000485934 RETNLBQ9BQ08 111 aa8.78□□□□□ -1
HDHD3-203ENST00000485934 FABP2P12104 132 aa8.77□□□□□ -1.01
HDHD3-203ENST00000485934 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
HDHD3-203ENST00000485934 CLEC2BQ92478 149 aa8.77□□□□□ -1.01
HDHD3-203ENST00000485934 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
HDHD3-203ENST00000485934 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
HDHD3-203ENST00000485934 NDUFV3P56181 108 aaKnown RBP8.76□□□□□ -1.01
HDHD3-203ENST00000485934 TRACP01848 142 aa8.75□□□□□ -1.01
HDHD3-203ENST00000485934 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
HDHD3-203ENST00000485934 Q5XG85 94 aa8.75□□□□□ -1.01
HDHD3-203ENST00000485934 TCL1BO95988 128 aa8.74□□□□□ -1.01
HDHD3-203ENST00000485934 BATFQ16520 125 aa8.72□□□□□ -1.01
HDHD3-203ENST00000485934 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
HDHD3-203ENST00000485934 H3BMG7 143 aa8.71□□□□□ -1.02
HDHD3-203ENST00000485934 LST1O00453 97 aa8.71□□□□□ -1.02
HDHD3-203ENST00000485934 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
HDHD3-203ENST00000485934 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
HDHD3-203ENST00000485934 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
HDHD3-203ENST00000485934 LRP2P98164 4655 aa8.69□□□□□ -1.02
HDHD3-203ENST00000485934 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
HDHD3-203ENST00000485934 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
HDHD3-203ENST00000485934 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
HDHD3-203ENST00000485934 H3BUT2 72 aa8.67□□□□□ -1.02
HDHD3-203ENST00000485934 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
HDHD3-203ENST00000485934 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
HDHD3-203ENST00000485934 Q6Q795 121 aa8.66□□□□□ -1.02
HDHD3-203ENST00000485934 TEN1Q86WV5 123 aa8.66□□□□□ -1.02
HDHD3-203ENST00000485934 ANKRD29Q8N6D5 301 aa8.64□□□□□ -1.03
HDHD3-203ENST00000485934 SS18L2Q9UHA2 77 aa8.64□□□□□ -1.03
HDHD3-203ENST00000485934 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
HDHD3-203ENST00000485934 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
HDHD3-203ENST00000485934 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
HDHD3-203ENST00000485934 NAA38Q9BRA0 125 aaKnown RBP8.62□□□□□ -1.03
HDHD3-203ENST00000485934 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
HDHD3-203ENST00000485934 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
HDHD3-203ENST00000485934 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
HDHD3-203ENST00000485934 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
HDHD3-203ENST00000485934 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
HDHD3-203ENST00000485934 JMJD7-PLA2G4BH0Y9G9 81 aa8.57□□□□□ -1.04
HDHD3-203ENST00000485934 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
HDHD3-203ENST00000485934 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
HDHD3-203ENST00000485934 COL5A1-AS1Q5SY13 56 aa8.57□□□□□ -1.04
HDHD3-203ENST00000485934 A0A1W2PPM0 123 aa8.56□□□□□ -1.04
HDHD3-203ENST00000485934 A0A087WSZ3 146 aa8.54□□□□□ -1.04
HDHD3-203ENST00000485934 CCKP06307 115 aa8.54□□□□□ -1.04
HDHD3-203ENST00000485934 C9JAW5 83 aa8.53□□□□□ -1.04
HDHD3-203ENST00000485934 PDE6GP18545 87 aa8.53□□□□□ -1.04
HDHD3-203ENST00000485934 A0A1B0GV72 72 aa8.52□□□□□ -1.05
HDHD3-203ENST00000485934 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
HDHD3-203ENST00000485934 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
HDHD3-203ENST00000485934 LPAP08519 4548 aa8.49□□□□□ -1.05
HDHD3-203ENST00000485934 A0A1B0GW54 56 aa8.49□□□□□ -1.05
HDHD3-203ENST00000485934 H3BT86 120 aa8.49□□□□□ -1.05
HDHD3-203ENST00000485934 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
HDHD3-203ENST00000485934 VPS25Q9BRG1 176 aa8.48□□□□□ -1.05
HDHD3-203ENST00000485934 XP32Q5T750 250 aa8.47□□□□□ -1.05
HDHD3-203ENST00000485934 SPCS1Q9Y6A9 102 aa8.47□□□□□ -1.05
HDHD3-203ENST00000485934 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
HDHD3-203ENST00000485934 LOC110117498A0A087WWA1 95 aa8.45□□□□□ -1.06
HDHD3-203ENST00000485934 RNF213Q63HN8 5207 aa8.44□□□□□ -1.06
HDHD3-203ENST00000485934 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
HDHD3-203ENST00000485934 Q6ZQT0 140 aa8.41□□□□□ -1.06
HDHD3-203ENST00000485934 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
HDHD3-203ENST00000485934 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
HDHD3-203ENST00000485934 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
HDHD3-203ENST00000485934 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
HDHD3-203ENST00000485934 J3KT08 172 aa8.38□□□□□ -1.07
HDHD3-203ENST00000485934 Q96NJ1 140 aa8.38□□□□□ -1.07
HDHD3-203ENST00000485934 SIGMAR1Q99720 223 aa8.38□□□□□ -1.07
HDHD3-203ENST00000485934 K7EP34 96 aa8.37□□□□□ -1.07
HDHD3-203ENST00000485934 LINC00472Q9H8W2 130 aa8.37□□□□□ -1.07
HDHD3-203ENST00000485934 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
HDHD3-203ENST00000485934 RPL37P61927 97 aaKnown RBP8.33□□□□□ -1.08
HDHD3-203ENST00000485934 LINC00313P59037 77 aa8.32□□□□□ -1.08
HDHD3-203ENST00000485934 NDUFB1O75438 58 aa8.31□□□□□ -1.08
HDHD3-203ENST00000485934 NREPQ16612 68 aa8.31□□□□□ -1.08
HDHD3-203ENST00000485934 F8W1H4 67 aa8.3□□□□□ -1.08
HDHD3-203ENST00000485934 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
HDHD3-203ENST00000485934 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
HDHD3-203ENST00000485934 Q75L30 129 aa8.3□□□□□ -1.08
HDHD3-203ENST00000485934 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms