RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 TTC28Q96AY4 2481 aa1.02□□□□□ -2.25
FN1-222ENST00000485567 UTRNP46939 3433 aa1.02□□□□□ -2.25
FN1-222ENST00000485567 REV3LO60673 3130 aa1.02□□□□□ -2.25
FN1-222ENST00000485567 CEP350Q5VT06 3117 aa1.02□□□□□ -2.25
FN1-222ENST00000485567 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
FN1-222ENST00000485567 KRTAP4-1Q9BYQ7 146 aa1.01□□□□□ -2.25
FN1-222ENST00000485567 GVINP1Q7Z2Y8 2422 aa1□□□□□ -2.25
FN1-222ENST00000485567 POLQO75417 2590 aa1□□□□□ -2.25
FN1-222ENST00000485567 ZNF292O60281 2723 aa0.99□□□□□ -2.25
FN1-222ENST00000485567 F8P00451 2351 aa0.98□□□□□ -2.25
FN1-222ENST00000485567 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
FN1-222ENST00000485567 NDUFA1O15239 70 aa0.98□□□□□ -2.25
FN1-222ENST00000485567 WT1-ASQ06250 92 aa0.98□□□□□ -2.25
FN1-222ENST00000485567 KNL1Q8NG31 2342 aa0.98□□□□□ -2.25
FN1-222ENST00000485567 PKDREJQ9NTG1 2253 aa0.98□□□□□ -2.25
FN1-222ENST00000485567 WFDC10BQ8IUB3 73 aa0.97□□□□□ -2.25
FN1-222ENST00000485567 KAAG1Q9UBP8 84 aa0.96□□□□□ -2.26
FN1-222ENST00000485567 EP400Q96L91 3159 aa0.95□□□□□ -2.26
FN1-222ENST00000485567 ABCA12Q86UK0 2595 aa0.95□□□□□ -2.26
FN1-222ENST00000485567 DEFB109BQ30KR1 87 aa0.95□□□□□ -2.26
FN1-222ENST00000485567 DSPP15924 2871 aaKnown RBP0.94□□□□□ -2.26
FN1-222ENST00000485567 S4R3F8 94 aa0.94□□□□□ -2.26
FN1-222ENST00000485567 IGF2RP11717 2491 aa0.94□□□□□ -2.26
FN1-222ENST00000485567 CELSR2Q9HCU4 2923 aa0.94□□□□□ -2.26
FN1-222ENST00000485567 PCNTO95613 3336 aa0.93□□□□□ -2.26
FN1-222ENST00000485567 GOLGB1Q14789 3259 aaKnown RBP0.93□□□□□ -2.26
FN1-222ENST00000485567 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
FN1-222ENST00000485567 CHD9Q3L8U1 2897 aa0.93□□□□□ -2.26
FN1-222ENST00000485567 PCNX1Q96RV3 2341 aa0.92□□□□□ -2.26
FN1-222ENST00000485567 PRLHP81277 87 aa0.92□□□□□ -2.26
FN1-222ENST00000485567 ABCA2Q9BZC7 2435 aa0.91□□□□□ -2.26
FN1-222ENST00000485567 TPRP12270 2363 aaKnown RBP0.91□□□□□ -2.26
FN1-222ENST00000485567 DEFB106AQ8N104 65 aa0.91□□□□□ -2.26
FN1-222ENST00000485567 BDP1A6H8Y1 2624 aa0.91□□□□□ -2.26
FN1-222ENST00000485567 TRANK1O15050 2925 aa0.91□□□□□ -2.26
FN1-222ENST00000485567 DUOX1Q9NRD9 1551 aa0.91□□□□□ -2.26
FN1-222ENST00000485567 AKAP6Q13023 2319 aa0.9□□□□□ -2.26
FN1-222ENST00000485567 PDE4DIPQ5VU43 2346 aa0.9□□□□□ -2.27
FN1-222ENST00000485567 CACNA1AO00555 2505 aa0.9□□□□□ -2.27
FN1-222ENST00000485567 ZFHX4Q86UP3 3567 aa0.9□□□□□ -2.27
FN1-222ENST00000485567 CSMD3Q7Z407 3707 aa0.89□□□□□ -2.27
FN1-222ENST00000485567 A0A0C4DFX4 3053 aa0.89□□□□□ -2.27
FN1-222ENST00000485567 VCANP13611 3396 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 ANK2Q01484 3957 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 IGLV5-48A0A075B6I7 105 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 H3BUA1 57 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 SZT2Q5T011 3432 aa0.88□□□□□ -2.27
FN1-222ENST00000485567 TNRC18O15417 2968 aaPredicted RBP0.86□□□□□ -2.27
FN1-222ENST00000485567 SPTBN5Q9NRC6 3674 aaKnown RBP0.86□□□□□ -2.27
FN1-222ENST00000485567 MKI67P46013 3256 aaKnown RBP0.86□□□□□ -2.27
FN1-222ENST00000485567 UNC80Q8N2C7 3258 aa0.86□□□□□ -2.27
FN1-222ENST00000485567 SMR3AQ99954 134 aa0.86□□□□□ -2.27
FN1-222ENST00000485567 ATRQ13535 2644 aa0.86□□□□□ -2.27
FN1-222ENST00000485567 COL6A3P12111 3177 aa0.86□□□□□ -2.27
FN1-222ENST00000485567 PKD1L2Q7Z442 2459 aa0.86□□□□□ -2.27
FN1-222ENST00000485567 BRCA2P51587 3418 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 CHD6Q8TD26 2715 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 CENPFP49454 3210 aa0.85□□□□□ -2.27
FN1-222ENST00000485567 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.27
FN1-222ENST00000485567 UNC79Q9P2D8 2635 aa0.84□□□□□ -2.27
FN1-222ENST00000485567 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
FN1-222ENST00000485567 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
FN1-222ENST00000485567 MUC3AQ02505 3323 aa0.84□□□□□ -2.27
FN1-222ENST00000485567 CLTCL1P53675 1640 aa0.84□□□□□ -2.28
FN1-222ENST00000485567 TENM4Q6N022 2769 aa0.84□□□□□ -2.28
FN1-222ENST00000485567 LAMA3Q16787 3333 aa0.83□□□□□ -2.28
FN1-222ENST00000485567 HECTD1Q9ULT8 2610 aa0.83□□□□□ -2.28
FN1-222ENST00000485567 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
FN1-222ENST00000485567 DEFB131AP59861 70 aa0.83□□□□□ -2.28
FN1-222ENST00000485567 RANBP2P49792 3224 aaKnown RBP0.82□□□□□ -2.28
FN1-222ENST00000485567 CHD8Q9HCK8 2581 aa0.82□□□□□ -2.28
FN1-222ENST00000485567 RPL39P62891 51 aaKnown RBP0.82□□□□□ -2.28
FN1-222ENST00000485567 FBN2P35556 2912 aa0.82□□□□□ -2.28
FN1-222ENST00000485567 LAMA2P24043 3122 aaKnown RBP0.81□□□□□ -2.28
FN1-222ENST00000485567 FRAS1Q86XX4 4008 aa0.81□□□□□ -2.28
FN1-222ENST00000485567 POLR2KP53803 58 aaKnown RBP0.81□□□□□ -2.28
FN1-222ENST00000485567 DEFB135Q30KP9 77 aa0.81□□□□□ -2.28
FN1-222ENST00000485567 SPTA1P02549 2419 aa0.8□□□□□ -2.28
FN1-222ENST00000485567 VWFP04275 2813 aa0.8□□□□□ -2.28
FN1-222ENST00000485567 EYSQ5T1H1 3165 aa0.8□□□□□ -2.28
FN1-222ENST00000485567 SPINK1P00995 79 aa0.8□□□□□ -2.28
FN1-222ENST00000485567 XIRP2A4UGR9 3374 aa0.8□□□□□ -2.28
FN1-222ENST00000485567 PRRC2CQ9Y520 2896 aaKnown RBP0.79□□□□□ -2.28
FN1-222ENST00000485567 ASPMQ8IZT6 3477 aa0.79□□□□□ -2.28
FN1-222ENST00000485567 GCC2Q8IWJ2 1684 aa0.79□□□□□ -2.28
FN1-222ENST00000485567 C5orf42Q9H799 3197 aa0.79□□□□□ -2.28
FN1-222ENST00000485567 CDH23Q9H251 3354 aa0.79□□□□□ -2.28
FN1-222ENST00000485567 NOTCH1P46531 2555 aa0.79□□□□□ -2.28
FN1-222ENST00000485567 USP34Q70CQ2 3546 aa0.78□□□□□ -2.28
FN1-222ENST00000485567 CFAP47Q6ZTR5 3102 aa0.78□□□□□ -2.28
FN1-222ENST00000485567 M0R2T5 61 aa0.78□□□□□ -2.28
FN1-222ENST00000485567 RPL39LQ96EH5 51 aaKnown RBP0.78□□□□□ -2.28
FN1-222ENST00000485567 NOP10Q9NPE3 64 aaKnown RBP0.78□□□□□ -2.28
FN1-222ENST00000485567 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.28
FN1-222ENST00000485567 SETXQ7Z333 2677 aaKnown RBP0.77□□□□□ -2.29
FN1-222ENST00000485567 CFAP54Q96N23 3096 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms