RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 Q6JHZ5 121 aa10.27□□□□□ -0.77
CTSA-207ENST00000484855 KRTAP10-1P60331 282 aa10.25□□□□□ -0.77
CTSA-207ENST00000484855 SPRR1BP22528 89 aa10.25□□□□□ -0.77
CTSA-207ENST00000484855 IGKV3D-7A0A0C4DH55 119 aa10.24□□□□□ -0.77
CTSA-207ENST00000484855 CIRBP-AS1Q8TBR5 109 aa10.24□□□□□ -0.77
CTSA-207ENST00000484855 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
CTSA-207ENST00000484855 Q6ZSA8 131 aa10.24□□□□□ -0.77
CTSA-207ENST00000484855 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
CTSA-207ENST00000484855 Q6ZVQ6 151 aa10.22□□□□□ -0.77
CTSA-207ENST00000484855 ATP5EP2Q5VTU8 51 aa10.22□□□□□ -0.77
CTSA-207ENST00000484855 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
CTSA-207ENST00000484855 A0A1W2PNM2 257 aa10.21□□□□□ -0.78
CTSA-207ENST00000484855 Q8NBF4 154 aa10.2□□□□□ -0.78
CTSA-207ENST00000484855 IGLV8-61A0A075B6I0 122 aa10.19□□□□□ -0.78
CTSA-207ENST00000484855 ZNF861PO60384 105 aa10.19□□□□□ -0.78
CTSA-207ENST00000484855 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
CTSA-207ENST00000484855 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
CTSA-207ENST00000484855 HAMPP81172 84 aa10.18□□□□□ -0.78
CTSA-207ENST00000484855 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
CTSA-207ENST00000484855 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
CTSA-207ENST00000484855 A0A1B0GW54 56 aa10.16□□□□□ -0.78
CTSA-207ENST00000484855 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
CTSA-207ENST00000484855 RYR2Q92736 4967 aa10.16□□□□□ -0.78
CTSA-207ENST00000484855 A0A0G2JQZ4 141 aa10.15□□□□□ -0.79
CTSA-207ENST00000484855 PKHD1P08F94 4074 aa10.14□□□□□ -0.79
CTSA-207ENST00000484855 NREPQ16612 68 aa10.14□□□□□ -0.79
CTSA-207ENST00000484855 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
CTSA-207ENST00000484855 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
CTSA-207ENST00000484855 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
CTSA-207ENST00000484855 HIST1H4AP62805 103 aaKnown RBP10.12□□□□□ -0.79
CTSA-207ENST00000484855 CRYGAP11844 174 aa10.12□□□□□ -0.79
CTSA-207ENST00000484855 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
CTSA-207ENST00000484855 CXCL6P80162 114 aa10.11□□□□□ -0.79
CTSA-207ENST00000484855 A0A087WVE0 104 aa10.1□□□□□ -0.79
CTSA-207ENST00000484855 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
CTSA-207ENST00000484855 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
CTSA-207ENST00000484855 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
CTSA-207ENST00000484855 ANAPC13Q9BS18 74 aa10.08□□□□□ -0.8
CTSA-207ENST00000484855 A0A1B0GVY2 172 aa10.07□□□□□ -0.8
CTSA-207ENST00000484855 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
CTSA-207ENST00000484855 BPY2O14599 106 aa10.05□□□□□ -0.8
CTSA-207ENST00000484855 ANAPC11Q9NYG5 84 aa10.05□□□□□ -0.8
CTSA-207ENST00000484855 A0A087WSZ3 146 aa10.04□□□□□ -0.8
CTSA-207ENST00000484855 VPS13BQ7Z7G8 4022 aa10.02□□□□□ -0.81
CTSA-207ENST00000484855 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
CTSA-207ENST00000484855 MOBPQ13875 183 aa10.01□□□□□ -0.81
CTSA-207ENST00000484855 ATOX1O00244 68 aa9.98□□□□□ -0.81
CTSA-207ENST00000484855 Q8N9L7 120 aa9.98□□□□□ -0.81
CTSA-207ENST00000484855 IGKV4-1P06312 121 aa9.96□□□□□ -0.82
CTSA-207ENST00000484855 APOBP04114 4563 aaKnown RBP9.96□□□□□ -0.82
CTSA-207ENST00000484855 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
CTSA-207ENST00000484855 DSCR10P59022 87 aa9.92□□□□□ -0.82
CTSA-207ENST00000484855 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
CTSA-207ENST00000484855 K7EQZ3 153 aa9.88□□□□□ -0.83
CTSA-207ENST00000484855 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
CTSA-207ENST00000484855 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
CTSA-207ENST00000484855 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
CTSA-207ENST00000484855 A0A087X002 238 aa9.87□□□□□ -0.83
CTSA-207ENST00000484855 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
CTSA-207ENST00000484855 SS18L2Q9UHA2 77 aa9.87□□□□□ -0.83
CTSA-207ENST00000484855 RYR3Q15413 4870 aa9.87□□□□□ -0.83
CTSA-207ENST00000484855 SSBP3-AS1Q7Z2R9 100 aa9.87□□□□□ -0.83
CTSA-207ENST00000484855 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
CTSA-207ENST00000484855 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
CTSA-207ENST00000484855 COX7CP15954 63 aa9.84□□□□□ -0.83
CTSA-207ENST00000484855 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
CTSA-207ENST00000484855 SPINK6Q6UWN8 80 aa9.83□□□□□ -0.84
CTSA-207ENST00000484855 UQCRQO14949 82 aa9.82□□□□□ -0.84
CTSA-207ENST00000484855 CD164Q04900 197 aa9.81□□□□□ -0.84
CTSA-207ENST00000484855 Q96NJ1 140 aa9.81□□□□□ -0.84
CTSA-207ENST00000484855 FAT1Q14517 4588 aa9.81□□□□□ -0.84
CTSA-207ENST00000484855 J3KT08 172 aa9.81□□□□□ -0.84
CTSA-207ENST00000484855 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
CTSA-207ENST00000484855 A8MWP4 228 aa9.8□□□□□ -0.84
CTSA-207ENST00000484855 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
CTSA-207ENST00000484855 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
CTSA-207ENST00000484855 HCG22E2RYF7 251 aa9.77□□□□□ -0.85
CTSA-207ENST00000484855 PRR15Q8IV56 129 aa9.77□□□□□ -0.85
CTSA-207ENST00000484855 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
CTSA-207ENST00000484855 NDUFB1O75438 58 aa9.74□□□□□ -0.85
CTSA-207ENST00000484855 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
CTSA-207ENST00000484855 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
CTSA-207ENST00000484855 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
CTSA-207ENST00000484855 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
CTSA-207ENST00000484855 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
CTSA-207ENST00000484855 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
CTSA-207ENST00000484855 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
CTSA-207ENST00000484855 HSPG2P98160 4391 aa9.67□□□□□ -0.86
CTSA-207ENST00000484855 CASC2Q6XLA1 102 aa9.67□□□□□ -0.86
CTSA-207ENST00000484855 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
CTSA-207ENST00000484855 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
CTSA-207ENST00000484855 MMP24-AS1A0A0U1RRL7 71 aa9.66□□□□□ -0.86
CTSA-207ENST00000484855 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CTSA-207ENST00000484855 Q5XG85 94 aa9.66□□□□□ -0.86
CTSA-207ENST00000484855 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
CTSA-207ENST00000484855 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
CTSA-207ENST00000484855 LIMD2Q9BT23 127 aa9.65□□□□□ -0.86
CTSA-207ENST00000484855 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
CTSA-207ENST00000484855 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
CTSA-207ENST00000484855 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms