RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 UBE2BP63146 152 aa11.46□□□□□ -0.58
SSR4-209ENST00000482902 A8MUN3 132 aa11.44□□□□□ -0.58
SSR4-209ENST00000482902 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
SSR4-209ENST00000482902 K7EIL1 84 aa11.42□□□□□ -0.58
SSR4-209ENST00000482902 NDUFB1O75438 58 aa11.42□□□□□ -0.58
SSR4-209ENST00000482902 HUWE1Q7Z6Z7 4374 aaKnown RBP11.41□□□□□ -0.58
SSR4-209ENST00000482902 A8MU10 97 aa11.39□□□□□ -0.59
SSR4-209ENST00000482902 Q5VV11 94 aa11.38□□□□□ -0.59
SSR4-209ENST00000482902 LINC00476Q8WZB0 136 aa11.38□□□□□ -0.59
SSR4-209ENST00000482902 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
SSR4-209ENST00000482902 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
SSR4-209ENST00000482902 WFDC13Q8IUB5 93 aa11.37□□□□□ -0.59
SSR4-209ENST00000482902 B9D2Q9BPU9 175 aa11.37□□□□□ -0.59
SSR4-209ENST00000482902 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
SSR4-209ENST00000482902 MP68P56378 58 aa11.36□□□□□ -0.59
SSR4-209ENST00000482902 A0A096LNI7 61 aa11.35□□□□□ -0.59
SSR4-209ENST00000482902 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
SSR4-209ENST00000482902 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
SSR4-209ENST00000482902 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
SSR4-209ENST00000482902 LINC00208Q96KT6 92 aa11.34□□□□□ -0.59
SSR4-209ENST00000482902 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
SSR4-209ENST00000482902 C16orf90A8MZG2 172 aa11.33□□□□□ -0.6
SSR4-209ENST00000482902 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
SSR4-209ENST00000482902 PRLHP81277 87 aa11.32□□□□□ -0.6
SSR4-209ENST00000482902 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
SSR4-209ENST00000482902 SPANXA2-OT1Q8N9U9 137 aa11.3□□□□□ -0.6
SSR4-209ENST00000482902 CNBPP62633 177 aaKnown RBP11.3□□□□□ -0.6
SSR4-209ENST00000482902 Q8N9P0 234 aaPredicted RBP11.3□□□□□ -0.6
SSR4-209ENST00000482902 COL6A5A8TX70 2615 aa11.29□□□□□ -0.6
SSR4-209ENST00000482902 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
SSR4-209ENST00000482902 A0A087WSZ3 146 aa11.27□□□□□ -0.61
SSR4-209ENST00000482902 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
SSR4-209ENST00000482902 H0Y9P7 68 aa11.26□□□□□ -0.61
SSR4-209ENST00000482902 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
SSR4-209ENST00000482902 UBE2AP49459 152 aa11.25□□□□□ -0.61
SSR4-209ENST00000482902 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
SSR4-209ENST00000482902 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
SSR4-209ENST00000482902 H3BPC8 53 aa11.24□□□□□ -0.61
SSR4-209ENST00000482902 CD164Q04900 197 aa11.23□□□□□ -0.61
SSR4-209ENST00000482902 IGLV8-61A0A075B6I0 122 aa11.23□□□□□ -0.61
SSR4-209ENST00000482902 LYSTQ99698 3801 aa11.23□□□□□ -0.61
SSR4-209ENST00000482902 PRR15LQ9BU68 103 aa11.23□□□□□ -0.61
SSR4-209ENST00000482902 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
SSR4-209ENST00000482902 CASC2Q6XLA1 102 aa11.21□□□□□ -0.61
SSR4-209ENST00000482902 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
SSR4-209ENST00000482902 C9orf163Q8N9P6 203 aa11.21□□□□□ -0.61
SSR4-209ENST00000482902 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
SSR4-209ENST00000482902 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
SSR4-209ENST00000482902 DNAH9Q9NYC9 4486 aa11.2□□□□□ -0.62
SSR4-209ENST00000482902 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
SSR4-209ENST00000482902 MGAM2Q2M2H8 2515 aa11.17□□□□□ -0.62
SSR4-209ENST00000482902 STAB2Q8WWQ8 2551 aa11.17□□□□□ -0.62
SSR4-209ENST00000482902 LCA10Q71F78 164 aa11.16□□□□□ -0.62
SSR4-209ENST00000482902 Q75L30 129 aa11.16□□□□□ -0.62
SSR4-209ENST00000482902 KTN1-AS1Q86SY8 53 aa11.15□□□□□ -0.62
SSR4-209ENST00000482902 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
SSR4-209ENST00000482902 COA5Q86WW8 74 aa11.13□□□□□ -0.63
SSR4-209ENST00000482902 A8MWP4 228 aa11.13□□□□□ -0.63
SSR4-209ENST00000482902 H0Y9J4 135 aa11.12□□□□□ -0.63
SSR4-209ENST00000482902 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
SSR4-209ENST00000482902 SPRR1BP22528 89 aa11.11□□□□□ -0.63
SSR4-209ENST00000482902 LINC00472Q9H8W2 130 aa11.1□□□□□ -0.63
SSR4-209ENST00000482902 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
SSR4-209ENST00000482902 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
SSR4-209ENST00000482902 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
SSR4-209ENST00000482902 A6NED7 52 aa11.08□□□□□ -0.64
SSR4-209ENST00000482902 A6NN06 94 aa11.06□□□□□ -0.64
SSR4-209ENST00000482902 NBDYA0A0U1RRE5 68 aa11.06□□□□□ -0.64
SSR4-209ENST00000482902 DYNC2H1Q8NCM8 4307 aaKnown RBP11.05□□□□□ -0.64
SSR4-209ENST00000482902 MMP24-AS1A0A0U1RRL7 71 aa11.05□□□□□ -0.64
SSR4-209ENST00000482902 PANO1I0J062 215 aa11.05□□□□□ -0.64
SSR4-209ENST00000482902 RBM12B-AS1Q9P1G2 102 aa11.05□□□□□ -0.64
SSR4-209ENST00000482902 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
SSR4-209ENST00000482902 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
SSR4-209ENST00000482902 CDC42SE1Q9NRR8 79 aa11.02□□□□□ -0.65
SSR4-209ENST00000482902 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
SSR4-209ENST00000482902 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
SSR4-209ENST00000482902 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
SSR4-209ENST00000482902 MDFIQ99750 246 aa11.01□□□□□ -0.65
SSR4-209ENST00000482902 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
SSR4-209ENST00000482902 KRTAP13-1Q8IUC0 172 aa10.99□□□□□ -0.65
SSR4-209ENST00000482902 TENM2Q9NT68 2774 aa10.99□□□□□ -0.65
SSR4-209ENST00000482902 NDUFS5O43920 106 aa10.99□□□□□ -0.65
SSR4-209ENST00000482902 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
SSR4-209ENST00000482902 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
SSR4-209ENST00000482902 NUPR2A6NF83 97 aa10.97□□□□□ -0.65
SSR4-209ENST00000482902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
SSR4-209ENST00000482902 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
SSR4-209ENST00000482902 ASB16-AS1Q495Z4 193 aa10.94□□□□□ -0.66
SSR4-209ENST00000482902 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
SSR4-209ENST00000482902 MOBPQ13875 183 aa10.93□□□□□ -0.66
SSR4-209ENST00000482902 IGLV9-49A0A0B4J1Y8 123 aa10.92□□□□□ -0.66
SSR4-209ENST00000482902 Q6ZR54 194 aa10.9□□□□□ -0.66
SSR4-209ENST00000482902 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.66
SSR4-209ENST00000482902 Q96NJ1 140 aa10.89□□□□□ -0.67
SSR4-209ENST00000482902 C7orf65Q6ZTY9 151 aa10.88□□□□□ -0.67
SSR4-209ENST00000482902 SPINK7P58062 85 aa10.88□□□□□ -0.67
SSR4-209ENST00000482902 HRES1P13985 223 aa10.87□□□□□ -0.67
SSR4-209ENST00000482902 A0A087WTM6 91 aa10.86□□□□□ -0.67
SSR4-209ENST00000482902 C8orf17Q9NRJ1 99 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms