RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SPANXB1Q9NS25 103 aaPredicted RBP1.67□□□□□ -2.14
CBX3-207ENST00000481300 SPANXCQ9NY87 97 aa1.67□□□□□ -2.14
CBX3-207ENST00000481300 ERG28Q9UKR5 140 aa1.67□□□□□ -2.14
CBX3-207ENST00000481300 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
CBX3-207ENST00000481300 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.66□□□□□ -2.14
CBX3-207ENST00000481300 TRBV30A0A0K0K1B3 111 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 FXYD2P54710 66 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 CNBPP62633 177 aaKnown RBP1.66□□□□□ -2.14
CBX3-207ENST00000481300 COX17Q14061 63 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 COL5A1-AS1Q5SY13 56 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 Q6ZRN7 208 aaPredicted RBP1.66□□□□□ -2.14
CBX3-207ENST00000481300 Q6ZRU5 148 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 CARD19Q96LW7 228 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 NHP2Q9NX24 153 aaKnown RBP1.66□□□□□ -2.14
CBX3-207ENST00000481300 C6orf48Q9UBA6 75 aa1.66□□□□□ -2.14
CBX3-207ENST00000481300 DNAH1Q9P2D7 4330 aa1.65□□□□□ -2.14
CBX3-207ENST00000481300 A0A087WTM6 91 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 LOC107984156A0A0G2JMH3 177 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 LOC107984640A0A0U1RRK4 108 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 LCE6AA0A183 80 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 K7ERJ3 54 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 FUSP35637 526 aaKnown RBP eCLIP1.65□□□□□ -2.15
CBX3-207ENST00000481300 MP68P56378 58 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 SOSTDC1Q6X4U4 206 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 ARL17AQ8IVW1 177 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 Q8N814 137 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 RAB37Q96AX2 223 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 C20orf166-AS1Q96NR2 134 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 XAGE1AQ9HD64 81 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 PRO1854Q9UHT4 67 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.15
CBX3-207ENST00000481300 DNAH7Q8WXX0 4024 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 ALMS1Q8TCU4 4167 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 TRAV13-2A0A0B4J235 113 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 H7C2G1 150 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 TAX1BP3O14907 124 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 C9orf163Q8N9P6 203 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 OR13C6PQ8NH95 151 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 DPH3Q96FX2 82 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 PKIGQ9Y2B9 76 aa1.64□□□□□ -2.15
CBX3-207ENST00000481300 TRBV10-2A0A0K0K1G8 114 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 H3BUT2 72 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 M0R378 163 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 NCR3O14931 201 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 SLC25A20O43772 301 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 NDUFC2O95298 119 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 S100A7L2Q5SY68 101 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 SDIM1Q6ZPB5 146 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 Q8NDZ9 215 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 NAA38Q9BRA0 125 aaKnown RBP1.63□□□□□ -2.15
CBX3-207ENST00000481300 LINC00474Q9P2X8 69 aa1.63□□□□□ -2.15
CBX3-207ENST00000481300 SACSQ9NZJ4 4579 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 DNAH11Q96DT5 4516 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 DNAH2Q9P225 4427 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 TGP01266 2768 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 COL7A1Q02388 2944 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 A0A096LNI7 61 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 TRBV10-3A0A0K0K1G6 114 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 A0A1B0GV90 55 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 A0A1W2PPM0 123 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 COX6CP09669 75 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 FABP2P12104 132 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 LYRM7Q5U5X0 104 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 SCXQ7RTU7 201 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 FAM19A5Q7Z5A7 132 aaPredicted RBP1.62□□□□□ -2.15
CBX3-207ENST00000481300 SMIM11BQ8TCY0 68 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 TMEM126AQ9H061 195 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 C22orf24Q9Y442 160 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 TENM2Q9NT68 2774 aa1.62□□□□□ -2.15
CBX3-207ENST00000481300 TRBV20-1A0A075B6N2 111 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 C8orf87E5RJ46 101 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 RPL28P46779 137 aaKnown RBP1.61□□□□□ -2.15
CBX3-207ENST00000481300 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 UBE2BP63146 152 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 SPACA4Q8TDM5 124 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 SPCS1Q9Y6A9 102 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 DNAH6Q9C0G6 4158 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 DNAH10Q8IVF4 4471 aa1.61□□□□□ -2.15
CBX3-207ENST00000481300 TRBV7-6A0A0J9YX20 115 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 ETDCA0A1B0GVM5 59 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 H0YGX0 51 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 K7EP34 96 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 SNCGO76070 127 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 TCL1BO95988 128 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 COX7BP24311 80 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 ATXN8Q156A1 80 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 GTF2H5Q6ZYL4 71 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 PHF5AQ7RTV0 110 aaKnown RBP1.6□□□□□ -2.15
CBX3-207ENST00000481300 CLEC2BQ92478 149 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 DIRC1Q969H9 104 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 KCNQ1DNQ9H478 68 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 PLAC8Q9NZF1 115 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 CSMD3Q7Z407 3707 aa1.6□□□□□ -2.15
CBX3-207ENST00000481300 RYR2Q92736 4967 aa1.59□□□□□ -2.15
CBX3-207ENST00000481300 H3BMG7 143 aa1.59□□□□□ -2.15
CBX3-207ENST00000481300 LST1O00453 97 aa1.59□□□□□ -2.15
CBX3-207ENST00000481300 LINC00575Q6W349 94 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms