RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 LOC107984640A0A0U1RRK4 108 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 F8VRH5 84 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 TSPEAR-AS2P59090 65 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
UPF3A-207ENST00000481131 SEC11AP67812 179 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 Q8IZM0 81 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
UPF3A-207ENST00000481131 SRRM2Q9UQ35 2752 aaKnown RBP2.23□□□□□ -2.05
UPF3A-207ENST00000481131 FLG2Q5D862 2391 aaPredicted RBP2.22□□□□□ -2.05
UPF3A-207ENST00000481131 TRBV30A0A0K0K1B3 111 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 H3BRM9 83 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 CKS1BP61024 79 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 FAM19A5Q7Z5A7 132 aaPredicted RBP2.22□□□□□ -2.05
UPF3A-207ENST00000481131 HIST3H2BBQ8N257 126 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 DPH3Q96FX2 82 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 XAGE1AQ9HD64 81 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 PLAC8Q9NZF1 115 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 HSPB8Q9UJY1 196 aa2.22□□□□□ -2.05
UPF3A-207ENST00000481131 SYS1-DBNDD2H3BUS1 97 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 DPM2O94777 84 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 IGKCP01834 107 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 KRTDAPP60985 99 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 LINC01545Q5VT33 79 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 PHF5AQ7RTV0 110 aaKnown RBP2.21□□□□□ -2.06
UPF3A-207ENST00000481131 ATOH7Q8N100 152 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 Q8NDZ9 215 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 TTTY13Q9BZ97 58 aa2.21□□□□□ -2.06
UPF3A-207ENST00000481131 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
UPF3A-207ENST00000481131 PLNP26678 52 aa2.2□□□□□ -2.06
UPF3A-207ENST00000481131 RPL37AP61513 92 aaKnown RBP2.2□□□□□ -2.06
UPF3A-207ENST00000481131 DAND5Q8N907 189 aa2.2□□□□□ -2.06
UPF3A-207ENST00000481131 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
UPF3A-207ENST00000481131 ERG28Q9UKR5 140 aa2.2□□□□□ -2.06
UPF3A-207ENST00000481131 MYCBP2O75592 4640 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 J3QQQ9 107 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 LEPROTO15243 131 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 S100A6P06703 90 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 SMIM13P0DJ93 91 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 LINC00474Q9P2X8 69 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 TP73-AS1Q9UF72 201 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 NDUFA12Q9UI09 145 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 PKIGQ9Y2B9 76 aa2.19□□□□□ -2.06
UPF3A-207ENST00000481131 LINC00158P58513 81 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 NPC2P61916 151 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 MEIG1Q5JSS6 88 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 PLEKHB2Q96CS7 222 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 PSORS1C2Q9UIG4 136 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 C22orf24Q9Y442 160 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 MUC2Q02817 5179 aa2.18□□□□□ -2.06
UPF3A-207ENST00000481131 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
UPF3A-207ENST00000481131 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 ZNF815PA8K554 130 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 NCR3O14931 201 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 UBE2BP63146 152 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 C1orf137Q5JT78 98 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 SOSTDC1Q6X4U4 206 aa2.17□□□□□ -2.06
UPF3A-207ENST00000481131 C20orf202A1L168 122 aa2.16□□□□□ -2.06
UPF3A-207ENST00000481131 TMEM238C9JI98 176 aa2.16□□□□□ -2.06
UPF3A-207ENST00000481131 COX17Q14061 63 aa2.16□□□□□ -2.06
UPF3A-207ENST00000481131 DMBT1Q9UGM3 2413 aaPredicted RBP2.15□□□□□ -2.07
UPF3A-207ENST00000481131 SFTA2Q6UW10 78 aa2.15□□□□□ -2.07
UPF3A-207ENST00000481131 SPANXB1Q9NS25 103 aaPredicted RBP2.15□□□□□ -2.07
UPF3A-207ENST00000481131 TNXBP22105 4242 aa2.15□□□□□ -2.07
UPF3A-207ENST00000481131 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 M0R378 163 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 PRLHP81277 87 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 PYY3Q5JQD4 70 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 LINC00308Q8TCZ7 52 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 TMEM126AQ9H061 195 aa2.14□□□□□ -2.07
UPF3A-207ENST00000481131 LOC107984156A0A0G2JMH3 177 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 BCE1O60756 84 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 TIMM17BO60830 172 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 JOSD1Q15040 202 aaPredicted RBP2.13□□□□□ -2.07
UPF3A-207ENST00000481131 SPATA45Q537H7 98 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 SPINK6Q6UWN8 80 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 ARL17AQ8IVW1 177 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 C14orf144Q96I85 54 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 MIEN1Q9BRT3 115 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 SPANXDQ9BXN6 97 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 SPANXCQ9NY87 97 aa2.13□□□□□ -2.07
UPF3A-207ENST00000481131 LINC00587B1AMM8 73 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 COX8AP10176 69 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 DDTP30046 118 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 AKR1D1P51857 326 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 C2orf91Q6ZV80 131 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 MUSTN1Q8IVN3 82 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 C12orf57Q99622 126 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 VAMP8Q9BV40 100 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 HERC1Q15751 4861 aa2.12□□□□□ -2.07
UPF3A-207ENST00000481131 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
UPF3A-207ENST00000481131 TRBV10-2A0A0K0K1G8 114 aa2.11□□□□□ -2.07
UPF3A-207ENST00000481131 ERC2-IT1O76042 136 aa2.11□□□□□ -2.07
UPF3A-207ENST00000481131 NDUFC2O95298 119 aa2.11□□□□□ -2.07
UPF3A-207ENST00000481131 SPRR1AP35321 89 aa2.11□□□□□ -2.07
UPF3A-207ENST00000481131 RPL28P46779 137 aaKnown RBP2.11□□□□□ -2.07
UPF3A-207ENST00000481131 S100A7L2Q5SY68 101 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms