RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
CCM2-213ENST00000480658 PYY3Q5JQD4 70 aa6.33□□□□□ -1.4
CCM2-213ENST00000480658 Q6JHZ5 121 aa6.33□□□□□ -1.4
CCM2-213ENST00000480658 hADV29S1A0JD25 119 aa6.32□□□□□ -1.4
CCM2-213ENST00000480658 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
CCM2-213ENST00000480658 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
CCM2-213ENST00000480658 HIST1H4GQ99525 98 aa6.31□□□□□ -1.4
CCM2-213ENST00000480658 DLEU1O43261 78 aa6.3□□□□□ -1.4
CCM2-213ENST00000480658 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
CCM2-213ENST00000480658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.3□□□□□ -1.4
CCM2-213ENST00000480658 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
CCM2-213ENST00000480658 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
CCM2-213ENST00000480658 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
CCM2-213ENST00000480658 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
CCM2-213ENST00000480658 COX8AP10176 69 aa6.28□□□□□ -1.4
CCM2-213ENST00000480658 SPATA45Q537H7 98 aa6.28□□□□□ -1.4
CCM2-213ENST00000480658 Q6ZQY7 126 aa6.28□□□□□ -1.4
CCM2-213ENST00000480658 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
CCM2-213ENST00000480658 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
CCM2-213ENST00000480658 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
CCM2-213ENST00000480658 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
CCM2-213ENST00000480658 C12orf57Q99622 126 aa6.26□□□□□ -1.41
CCM2-213ENST00000480658 H0YGX0 51 aa6.25□□□□□ -1.41
CCM2-213ENST00000480658 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
CCM2-213ENST00000480658 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
CCM2-213ENST00000480658 C14orf144Q96I85 54 aa6.24□□□□□ -1.41
CCM2-213ENST00000480658 SNHG12Q9BXW3 62 aa6.24□□□□□ -1.41
CCM2-213ENST00000480658 SS18L2Q9UHA2 77 aa6.24□□□□□ -1.41
CCM2-213ENST00000480658 A0A0B4J2C4 111 aa6.23□□□□□ -1.41
CCM2-213ENST00000480658 TRBV7-7A0A0K0K1E9 115 aa6.23□□□□□ -1.41
CCM2-213ENST00000480658 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
CCM2-213ENST00000480658 A0A1B0GX51 115 aa6.22□□□□□ -1.41
CCM2-213ENST00000480658 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
CCM2-213ENST00000480658 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
CCM2-213ENST00000480658 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
CCM2-213ENST00000480658 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
CCM2-213ENST00000480658 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
CCM2-213ENST00000480658 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
CCM2-213ENST00000480658 H3BQ85 93 aa6.19□□□□□ -1.42
CCM2-213ENST00000480658 LST1O00453 97 aa6.18□□□□□ -1.42
CCM2-213ENST00000480658 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
CCM2-213ENST00000480658 CFC1P0CG37 223 aa6.18□□□□□ -1.42
CCM2-213ENST00000480658 Q6Q795 121 aa6.18□□□□□ -1.42
CCM2-213ENST00000480658 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
CCM2-213ENST00000480658 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
CCM2-213ENST00000480658 A0A0G2JQZ4 141 aa6.15□□□□□ -1.42
CCM2-213ENST00000480658 CEND1Q8N111 149 aa6.15□□□□□ -1.42
CCM2-213ENST00000480658 UQCR10Q9UDW1 63 aa6.15□□□□□ -1.42
CCM2-213ENST00000480658 PRO1854Q9UHT4 67 aa6.15□□□□□ -1.42
CCM2-213ENST00000480658 DNAL4O96015 105 aa6.14□□□□□ -1.43
CCM2-213ENST00000480658 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
CCM2-213ENST00000480658 COX6CP09669 75 aa6.13□□□□□ -1.43
CCM2-213ENST00000480658 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
CCM2-213ENST00000480658 Q75L30 129 aa6.13□□□□□ -1.43
CCM2-213ENST00000480658 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
CCM2-213ENST00000480658 H3BMG7 143 aa6.11□□□□□ -1.43
CCM2-213ENST00000480658 H3BUT2 72 aa6.11□□□□□ -1.43
CCM2-213ENST00000480658 HSD52Q0P140 79 aa6.11□□□□□ -1.43
CCM2-213ENST00000480658 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
CCM2-213ENST00000480658 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
CCM2-213ENST00000480658 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
CCM2-213ENST00000480658 FABP2P12104 132 aa6.09□□□□□ -1.43
CCM2-213ENST00000480658 FXYD2P54710 66 aa6.09□□□□□ -1.43
CCM2-213ENST00000480658 ORMDL1Q9P0S3 153 aa6.09□□□□□ -1.43
CCM2-213ENST00000480658 TSTD3H0UI37 97 aa6.08□□□□□ -1.44
CCM2-213ENST00000480658 TMEM256-PLSCR3K7ERE1 68 aa6.08□□□□□ -1.44
CCM2-213ENST00000480658 FAM218AQ96MZ4 157 aa6.08□□□□□ -1.44
CCM2-213ENST00000480658 A0A087WSZ3 146 aa6.07□□□□□ -1.44
CCM2-213ENST00000480658 TRIAP1O43715 76 aa6.07□□□□□ -1.44
CCM2-213ENST00000480658 PSMB2P49721 201 aa6.07□□□□□ -1.44
CCM2-213ENST00000480658 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
CCM2-213ENST00000480658 MT1HP80294 61 aa6.06□□□□□ -1.44
CCM2-213ENST00000480658 H3BS24 57 aa6.05□□□□□ -1.44
CCM2-213ENST00000480658 M0R2T5 61 aa6.05□□□□□ -1.44
CCM2-213ENST00000480658 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
CCM2-213ENST00000480658 Q96NJ1 140 aa6.05□□□□□ -1.44
CCM2-213ENST00000480658 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CCM2-213ENST00000480658 ANKRD29Q8N6D5 301 aa6.04□□□□□ -1.44
CCM2-213ENST00000480658 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
CCM2-213ENST00000480658 K7ERJ3 54 aa6.02□□□□□ -1.45
CCM2-213ENST00000480658 UBE2V1Q13404 147 aa6.02□□□□□ -1.45
CCM2-213ENST00000480658 SIGMAR1Q99720 223 aa6.02□□□□□ -1.45
CCM2-213ENST00000480658 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
CCM2-213ENST00000480658 M0R143 59 aa6.01□□□□□ -1.45
CCM2-213ENST00000480658 A8MUU9 505 aa6□□□□□ -1.45
CCM2-213ENST00000480658 TRACP01848 142 aa6□□□□□ -1.45
CCM2-213ENST00000480658 A0A1W2PNM2 257 aa5.98□□□□□ -1.45
CCM2-213ENST00000480658 CCKP06307 115 aa5.98□□□□□ -1.45
CCM2-213ENST00000480658 LINC00313P59037 77 aa5.98□□□□□ -1.45
CCM2-213ENST00000480658 IGKV4-1P06312 121 aa5.97□□□□□ -1.45
CCM2-213ENST00000480658 SCGB1C2P0DMR2 95 aa5.97□□□□□ -1.45
CCM2-213ENST00000480658 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
CCM2-213ENST00000480658 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
CCM2-213ENST00000480658 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
CCM2-213ENST00000480658 BATFQ16520 125 aa5.95□□□□□ -1.46
CCM2-213ENST00000480658 A0A1B0GW54 56 aa5.94□□□□□ -1.46
CCM2-213ENST00000480658 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
CCM2-213ENST00000480658 J3KT08 172 aa5.93□□□□□ -1.46
CCM2-213ENST00000480658 DSCR10P59022 87 aa5.93□□□□□ -1.46
CCM2-213ENST00000480658 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms