RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
SLC1A4-203ENST00000480594 FLNAP21333 2647 aaKnown RBP6.52□□□□□ -1.37
SLC1A4-203ENST00000480594 BPTFQ12830 3046 aa6.52□□□□□ -1.37
SLC1A4-203ENST00000480594 CEP350Q5VT06 3117 aa6.51□□□□□ -1.37
SLC1A4-203ENST00000480594 MGAM2Q2M2H8 2515 aa6.51□□□□□ -1.37
SLC1A4-203ENST00000480594 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
SLC1A4-203ENST00000480594 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
SLC1A4-203ENST00000480594 ROMO1P60602 79 aa6.48□□□□□ -1.37
SLC1A4-203ENST00000480594 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
SLC1A4-203ENST00000480594 C5orf42Q9H799 3197 aa6.47□□□□□ -1.37
SLC1A4-203ENST00000480594 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
SLC1A4-203ENST00000480594 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
SLC1A4-203ENST00000480594 ITPR3Q14573 2671 aa6.45□□□□□ -1.38
SLC1A4-203ENST00000480594 PCNTO95613 3336 aa6.45□□□□□ -1.38
SLC1A4-203ENST00000480594 ATRQ13535 2644 aa6.43□□□□□ -1.38
SLC1A4-203ENST00000480594 LCE6AA0A183 80 aa6.42□□□□□ -1.38
SLC1A4-203ENST00000480594 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
SLC1A4-203ENST00000480594 R4GN34 69 aa6.41□□□□□ -1.38
SLC1A4-203ENST00000480594 FLNBO75369 2602 aaKnown RBP6.4□□□□□ -1.39
SLC1A4-203ENST00000480594 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
SLC1A4-203ENST00000480594 CHD7Q9P2D1 2997 aa6.39□□□□□ -1.39
SLC1A4-203ENST00000480594 A6NN06 94 aa6.37□□□□□ -1.39
SLC1A4-203ENST00000480594 Q5VSD8 79 aa6.34□□□□□ -1.39
SLC1A4-203ENST00000480594 PANO1I0J062 215 aa6.34□□□□□ -1.39
SLC1A4-203ENST00000480594 KRTAP10-1P60331 282 aa6.34□□□□□ -1.39
SLC1A4-203ENST00000480594 MAST4O15021 2626 aa6.32□□□□□ -1.4
SLC1A4-203ENST00000480594 A0A087X002 238 aa6.31□□□□□ -1.4
SLC1A4-203ENST00000480594 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
SLC1A4-203ENST00000480594 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
SLC1A4-203ENST00000480594 CHD9Q3L8U1 2897 aa6.31□□□□□ -1.4
SLC1A4-203ENST00000480594 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
SLC1A4-203ENST00000480594 M0QZ58 72 aa6.29□□□□□ -1.4
SLC1A4-203ENST00000480594 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
SLC1A4-203ENST00000480594 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
SLC1A4-203ENST00000480594 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
SLC1A4-203ENST00000480594 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
SLC1A4-203ENST00000480594 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
SLC1A4-203ENST00000480594 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
SLC1A4-203ENST00000480594 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
SLC1A4-203ENST00000480594 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
SLC1A4-203ENST00000480594 CFAP46Q8IYW2 2715 aa6.24□□□□□ -1.41
SLC1A4-203ENST00000480594 AKAP13Q12802 2813 aa6.22□□□□□ -1.41
SLC1A4-203ENST00000480594 GCN1Q92616 2671 aaKnown RBP6.22□□□□□ -1.41
SLC1A4-203ENST00000480594 NBEAL1Q6ZS30 2694 aa6.21□□□□□ -1.42
SLC1A4-203ENST00000480594 A0A0C4DFX4 3053 aa6.21□□□□□ -1.42
SLC1A4-203ENST00000480594 CFAP54Q96N23 3096 aa6.21□□□□□ -1.42
SLC1A4-203ENST00000480594 UNC79Q9P2D8 2635 aa6.2□□□□□ -1.42
SLC1A4-203ENST00000480594 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
SLC1A4-203ENST00000480594 CENPEQ02224 2701 aa6.19□□□□□ -1.42
SLC1A4-203ENST00000480594 MKI67P46013 3256 aaKnown RBP6.18□□□□□ -1.42
SLC1A4-203ENST00000480594 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
SLC1A4-203ENST00000480594 TRANK1O15050 2925 aa6.18□□□□□ -1.42
SLC1A4-203ENST00000480594 HTTP42858 3142 aa6.17□□□□□ -1.42
SLC1A4-203ENST00000480594 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
SLC1A4-203ENST00000480594 A8MU10 97 aa6.16□□□□□ -1.42
SLC1A4-203ENST00000480594 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
SLC1A4-203ENST00000480594 RANBP2P49792 3224 aaKnown RBP6.13□□□□□ -1.43
SLC1A4-203ENST00000480594 MGAQ8IWI9 3026 aa6.13□□□□□ -1.43
SLC1A4-203ENST00000480594 BRCA2P51587 3418 aa6.11□□□□□ -1.43
SLC1A4-203ENST00000480594 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
SLC1A4-203ENST00000480594 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
SLC1A4-203ENST00000480594 LAMA3Q16787 3333 aa6.11□□□□□ -1.43
SLC1A4-203ENST00000480594 ZNF292O60281 2723 aa6.11□□□□□ -1.43
SLC1A4-203ENST00000480594 TEX15Q9BXT5 2789 aa6.1□□□□□ -1.43
SLC1A4-203ENST00000480594 LAMA2P24043 3122 aaKnown RBP6.08□□□□□ -1.44
SLC1A4-203ENST00000480594 NBEAL2Q6ZNJ1 2754 aa6.07□□□□□ -1.44
SLC1A4-203ENST00000480594 A8MUU9 505 aa6.06□□□□□ -1.44
SLC1A4-203ENST00000480594 NOTCH1P46531 2555 aa6.05□□□□□ -1.44
SLC1A4-203ENST00000480594 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
SLC1A4-203ENST00000480594 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
SLC1A4-203ENST00000480594 TEP1Q99973 2627 aaKnown RBP6.01□□□□□ -1.45
SLC1A4-203ENST00000480594 TRIOO75962 3097 aa6.01□□□□□ -1.45
SLC1A4-203ENST00000480594 UNC80Q8N2C7 3258 aa6□□□□□ -1.45
SLC1A4-203ENST00000480594 COL6A5A8TX70 2615 aa5.99□□□□□ -1.45
SLC1A4-203ENST00000480594 WDFY4Q6ZS81 3184 aa5.99□□□□□ -1.45
SLC1A4-203ENST00000480594 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
SLC1A4-203ENST00000480594 XIRP2A4UGR9 3374 aa5.97□□□□□ -1.45
SLC1A4-203ENST00000480594 PRUNE2Q8WUY3 3088 aa5.95□□□□□ -1.46
SLC1A4-203ENST00000480594 FRYQ5TBA9 3013 aa5.94□□□□□ -1.46
SLC1A4-203ENST00000480594 IGSF10Q6WRI0 2623 aa5.92□□□□□ -1.46
SLC1A4-203ENST00000480594 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
SLC1A4-203ENST00000480594 NSD1Q96L73 2696 aaPredicted RBP5.91□□□□□ -1.46
SLC1A4-203ENST00000480594 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.47
SLC1A4-203ENST00000480594 UBR5O95071 2799 aaPredicted RBP5.9□□□□□ -1.47
SLC1A4-203ENST00000480594 CELSR3Q9NYQ7 3312 aa5.89□□□□□ -1.47
SLC1A4-203ENST00000480594 TNP1P09430 55 aa5.89□□□□□ -1.47
SLC1A4-203ENST00000480594 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
SLC1A4-203ENST00000480594 DSPP15924 2871 aaKnown RBP5.87□□□□□ -1.47
SLC1A4-203ENST00000480594 BAHCC1Q9P281 2608 aa5.87□□□□□ -1.47
SLC1A4-203ENST00000480594 VPS13AQ96RL7 3174 aa5.86□□□□□ -1.47
SLC1A4-203ENST00000480594 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
SLC1A4-203ENST00000480594 MAP1AP78559 2803 aaPredicted RBP5.85□□□□□ -1.47
SLC1A4-203ENST00000480594 DNAH14Q0VDD8 3507 aa5.85□□□□□ -1.47
SLC1A4-203ENST00000480594 ITPR2Q14571 2701 aa5.84□□□□□ -1.47
SLC1A4-203ENST00000480594 KMT2BQ9UMN6 2715 aaPredicted RBP5.84□□□□□ -1.48
SLC1A4-203ENST00000480594 H0YAA0 97 aa5.84□□□□□ -1.48
SLC1A4-203ENST00000480594 KALRNO60229 2985 aa5.82□□□□□ -1.48
SLC1A4-203ENST00000480594 ITPR1Q14643 2758 aa5.81□□□□□ -1.48
SLC1A4-203ENST00000480594 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
SLC1A4-203ENST00000480594 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms