RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
VTI1A-204ENST00000480057 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
VTI1A-204ENST00000480057 F8WEM9 126 aa6.77□□□□□ -1.33
VTI1A-204ENST00000480057 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
VTI1A-204ENST00000480057 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
VTI1A-204ENST00000480057 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
VTI1A-204ENST00000480057 FAT2Q9NYQ8 4349 aa6.77□□□□□ -1.33
VTI1A-204ENST00000480057 MT-ATP8P03928 68 aa6.76□□□□□ -1.33
VTI1A-204ENST00000480057 Q6Q795 121 aa6.76□□□□□ -1.33
VTI1A-204ENST00000480057 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
VTI1A-204ENST00000480057 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
VTI1A-204ENST00000480057 DNAH5Q8TE73 4624 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 ZNF861PO60384 105 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 XP32Q5T750 250 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 Q6JHZ5 121 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
VTI1A-204ENST00000480057 TRBV7-7A0A0K0K1E9 115 aa6.74□□□□□ -1.33
VTI1A-204ENST00000480057 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
VTI1A-204ENST00000480057 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
VTI1A-204ENST00000480057 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
VTI1A-204ENST00000480057 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
VTI1A-204ENST00000480057 PKD1P98161 4303 aa6.72□□□□□ -1.33
VTI1A-204ENST00000480057 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
VTI1A-204ENST00000480057 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
VTI1A-204ENST00000480057 Q8NBF4 154 aa6.72□□□□□ -1.33
VTI1A-204ENST00000480057 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
VTI1A-204ENST00000480057 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
VTI1A-204ENST00000480057 RYR2Q92736 4967 aa6.7□□□□□ -1.34
VTI1A-204ENST00000480057 Q6ZVQ6 151 aa6.69□□□□□ -1.34
VTI1A-204ENST00000480057 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
VTI1A-204ENST00000480057 CRYGAP11844 174 aa6.68□□□□□ -1.34
VTI1A-204ENST00000480057 IGFL1Q6UW32 110 aa6.68□□□□□ -1.34
VTI1A-204ENST00000480057 CXCL6P80162 114 aa6.66□□□□□ -1.34
VTI1A-204ENST00000480057 NREPQ16612 68 aa6.64□□□□□ -1.35
VTI1A-204ENST00000480057 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
VTI1A-204ENST00000480057 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
VTI1A-204ENST00000480057 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
VTI1A-204ENST00000480057 PCP4P48539 62 aa6.61□□□□□ -1.35
VTI1A-204ENST00000480057 HAMPP81172 84 aa6.61□□□□□ -1.35
VTI1A-204ENST00000480057 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
VTI1A-204ENST00000480057 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
VTI1A-204ENST00000480057 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.36
VTI1A-204ENST00000480057 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
VTI1A-204ENST00000480057 BPY2O14599 106 aa6.58□□□□□ -1.36
VTI1A-204ENST00000480057 HIST1H4AP62805 103 aaKnown RBP6.58□□□□□ -1.36
VTI1A-204ENST00000480057 SSBP3-AS1Q7Z2R9 100 aa6.58□□□□□ -1.36
VTI1A-204ENST00000480057 A0A087WSZ3 146 aa6.57□□□□□ -1.36
VTI1A-204ENST00000480057 LRP1BQ9NZR2 4599 aa6.57□□□□□ -1.36
VTI1A-204ENST00000480057 A0A0G2JQZ4 141 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 CD164Q04900 197 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 MOBPQ13875 183 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
VTI1A-204ENST00000480057 KMT2CQ8NEZ4 4911 aaKnown RBP6.56□□□□□ -1.36
VTI1A-204ENST00000480057 SS18L2Q9UHA2 77 aa6.55□□□□□ -1.36
VTI1A-204ENST00000480057 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-204ENST00000480057 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
VTI1A-204ENST00000480057 ATOX1O00244 68 aa6.53□□□□□ -1.36
VTI1A-204ENST00000480057 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
VTI1A-204ENST00000480057 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
VTI1A-204ENST00000480057 ANAPC11Q9NYG5 84 aa6.53□□□□□ -1.36
VTI1A-204ENST00000480057 A0A087WVE0 104 aa6.52□□□□□ -1.37
VTI1A-204ENST00000480057 J3KT08 172 aa6.52□□□□□ -1.37
VTI1A-204ENST00000480057 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
VTI1A-204ENST00000480057 IGKV4-1P06312 121 aa6.51□□□□□ -1.37
VTI1A-204ENST00000480057 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
VTI1A-204ENST00000480057 LINC00472Q9H8W2 130 aa6.51□□□□□ -1.37
VTI1A-204ENST00000480057 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
VTI1A-204ENST00000480057 DSCR10P59022 87 aa6.5□□□□□ -1.37
VTI1A-204ENST00000480057 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
VTI1A-204ENST00000480057 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
VTI1A-204ENST00000480057 CDK2AP2O75956 126 aa6.48□□□□□ -1.37
VTI1A-204ENST00000480057 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-204ENST00000480057 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
VTI1A-204ENST00000480057 A0A087X002 238 aa6.47□□□□□ -1.37
VTI1A-204ENST00000480057 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
VTI1A-204ENST00000480057 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
VTI1A-204ENST00000480057 Q5XG85 94 aa6.47□□□□□ -1.37
VTI1A-204ENST00000480057 A8MWP4 228 aa6.46□□□□□ -1.38
VTI1A-204ENST00000480057 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-204ENST00000480057 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
VTI1A-204ENST00000480057 K7EQZ3 153 aa6.45□□□□□ -1.38
VTI1A-204ENST00000480057 Q8N9L7 120 aa6.45□□□□□ -1.38
VTI1A-204ENST00000480057 HRCT1Q6UXD1 115 aa6.44□□□□□ -1.38
VTI1A-204ENST00000480057 Q96NJ1 140 aa6.44□□□□□ -1.38
VTI1A-204ENST00000480057 RYR3Q15413 4870 aa6.43□□□□□ -1.38
VTI1A-204ENST00000480057 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
VTI1A-204ENST00000480057 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
VTI1A-204ENST00000480057 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
VTI1A-204ENST00000480057 UQCRQO14949 82 aa6.42□□□□□ -1.38
VTI1A-204ENST00000480057 NDUFB1O75438 58 aa6.42□□□□□ -1.38
VTI1A-204ENST00000480057 COX7CP15954 63 aa6.42□□□□□ -1.38
VTI1A-204ENST00000480057 TYMSOSQ8TAI1 123 aa6.42□□□□□ -1.38
VTI1A-204ENST00000480057 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
VTI1A-204ENST00000480057 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
VTI1A-204ENST00000480057 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
VTI1A-204ENST00000480057 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms