RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 COX6B2Q6YFQ2 88 aa3.56□□□□□ -1.84
FN1-220ENST00000480024 M0R2T5 61 aa3.55□□□□□ -1.84
FN1-220ENST00000480024 VAMP3Q15836 100 aa3.55□□□□□ -1.84
FN1-220ENST00000480024 Q6ZQY7 126 aa3.55□□□□□ -1.84
FN1-220ENST00000480024 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
FN1-220ENST00000480024 hADV29S1A0JD25 119 aa3.54□□□□□ -1.84
FN1-220ENST00000480024 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
FN1-220ENST00000480024 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
FN1-220ENST00000480024 LINC00575Q6W349 94 aa3.54□□□□□ -1.84
FN1-220ENST00000480024 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
FN1-220ENST00000480024 TRBV7-7A0A0K0K1E9 115 aa3.53□□□□□ -1.84
FN1-220ENST00000480024 SNRPEP62304 92 aaKnown RBP3.53□□□□□ -1.84
FN1-220ENST00000480024 Q6JHZ5 121 aa3.53□□□□□ -1.84
FN1-220ENST00000480024 IGFL1Q6UW32 110 aa3.53□□□□□ -1.84
FN1-220ENST00000480024 C12orf57Q99622 126 aa3.53□□□□□ -1.84
FN1-220ENST00000480024 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
FN1-220ENST00000480024 S100A2P29034 98 aa3.52□□□□□ -1.85
FN1-220ENST00000480024 HIST3H2BBQ8N257 126 aa3.52□□□□□ -1.85
FN1-220ENST00000480024 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
FN1-220ENST00000480024 HIST1H2BLQ99880 126 aa3.52□□□□□ -1.85
FN1-220ENST00000480024 USH2AO75445 5202 aa3.51□□□□□ -1.85
FN1-220ENST00000480024 H3BUT2 72 aa3.51□□□□□ -1.85
FN1-220ENST00000480024 OCIAD2Q56VL3 154 aa3.5□□□□□ -1.85
FN1-220ENST00000480024 BVES-AS1Q5T3Y7 98 aa3.5□□□□□ -1.85
FN1-220ENST00000480024 Q6Q795 121 aa3.5□□□□□ -1.85
FN1-220ENST00000480024 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.5□□□□□ -1.85
FN1-220ENST00000480024 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
FN1-220ENST00000480024 HIST1H4GQ99525 98 aa3.49□□□□□ -1.85
FN1-220ENST00000480024 SNHG12Q9BXW3 62 aa3.49□□□□□ -1.85
FN1-220ENST00000480024 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
FN1-220ENST00000480024 LST1O00453 97 aa3.48□□□□□ -1.85
FN1-220ENST00000480024 Q75L30 129 aa3.48□□□□□ -1.85
FN1-220ENST00000480024 PPDPFLQ8WWR9 84 aa3.48□□□□□ -1.85
FN1-220ENST00000480024 SCGB1D1O95968 90 aa3.47□□□□□ -1.85
FN1-220ENST00000480024 S100A6P06703 90 aa3.47□□□□□ -1.85
FN1-220ENST00000480024 Q96NJ1 140 aa3.47□□□□□ -1.85
FN1-220ENST00000480024 COX8AP10176 69 aa3.46□□□□□ -1.86
FN1-220ENST00000480024 SS18L2Q9UHA2 77 aa3.46□□□□□ -1.86
FN1-220ENST00000480024 A0A087WSZ3 146 aa3.45□□□□□ -1.86
FN1-220ENST00000480024 CFC1P0CG37 223 aa3.45□□□□□ -1.86
FN1-220ENST00000480024 RAB37Q96AX2 223 aa3.45□□□□□ -1.86
FN1-220ENST00000480024 FAM218AQ96MZ4 157 aa3.45□□□□□ -1.86
FN1-220ENST00000480024 NDUFV3P56181 108 aaKnown RBP3.44□□□□□ -1.86
FN1-220ENST00000480024 C14orf144Q96I85 54 aa3.44□□□□□ -1.86
FN1-220ENST00000480024 A0A0B4J2C4 111 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 DLEU1O43261 78 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 SNCGO76070 127 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 DSCR10P59022 87 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 TEN1Q86WV5 123 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 C20orf166-AS1Q96NR2 134 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 SIGMAR1Q99720 223 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 PAM16Q9Y3D7 125 aa3.43□□□□□ -1.86
FN1-220ENST00000480024 A8MUU9 505 aa3.42□□□□□ -1.86
FN1-220ENST00000480024 H0YGX0 51 aa3.42□□□□□ -1.86
FN1-220ENST00000480024 H3BMG7 143 aa3.42□□□□□ -1.86
FN1-220ENST00000480024 FABP2P12104 132 aa3.42□□□□□ -1.86
FN1-220ENST00000480024 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
FN1-220ENST00000480024 A0A1B0GV72 72 aa3.41□□□□□ -1.86
FN1-220ENST00000480024 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
FN1-220ENST00000480024 HIGD1BQ9P298 99 aa3.41□□□□□ -1.86
FN1-220ENST00000480024 TRBV20-1A0A075B6N2 111 aa3.4□□□□□ -1.87
FN1-220ENST00000480024 A0A1W2PNM2 257 aa3.4□□□□□ -1.87
FN1-220ENST00000480024 TRIAP1O43715 76 aa3.4□□□□□ -1.87
FN1-220ENST00000480024 S100A1P23297 94 aa3.4□□□□□ -1.87
FN1-220ENST00000480024 VAMP8Q9BV40 100 aa3.4□□□□□ -1.87
FN1-220ENST00000480024 TMEM238LA0A1B0GVL6 79 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 A0A1B0GX51 115 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 A6NJY4 79 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 GHRHP01286 108 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 FXYD2P54710 66 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 CEND1Q8N111 149 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
FN1-220ENST00000480024 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
FN1-220ENST00000480024 FAM236DA0A1B0GTK5 79 aa3.38□□□□□ -1.87
FN1-220ENST00000480024 DNAL4O96015 105 aa3.38□□□□□ -1.87
FN1-220ENST00000480024 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
FN1-220ENST00000480024 FAM236CP0DP71 79 aa3.38□□□□□ -1.87
FN1-220ENST00000480024 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
FN1-220ENST00000480024 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 K7ERJ3 54 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 LINC00313P59037 77 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 DEFB116Q30KQ4 102 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 ANKRD29Q8N6D5 301 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 ORMDL1Q9P0S3 153 aa3.37□□□□□ -1.87
FN1-220ENST00000480024 TRBV7-4A0A0J9YYF1 115 aa3.36□□□□□ -1.87
FN1-220ENST00000480024 PSMB2P49721 201 aa3.36□□□□□ -1.87
FN1-220ENST00000480024 NOTCH2NLQ7Z3S9 236 aa3.36□□□□□ -1.87
FN1-220ENST00000480024 IGHV6-1A0A0B4J1U7 121 aa3.35□□□□□ -1.87
FN1-220ENST00000480024 TRACP01848 142 aa3.35□□□□□ -1.87
FN1-220ENST00000480024 MT2AP02795 61 aa3.35□□□□□ -1.87
FN1-220ENST00000480024 CCKP06307 115 aa3.35□□□□□ -1.87
FN1-220ENST00000480024 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
FN1-220ENST00000480024 HSD52Q0P140 79 aa3.34□□□□□ -1.87
FN1-220ENST00000480024 VPS25Q9BRG1 176 aa3.34□□□□□ -1.87
FN1-220ENST00000480024 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
FN1-220ENST00000480024 H3BQ85 93 aa3.33□□□□□ -1.88
FN1-220ENST00000480024 TMEM256-PLSCR3K7ERE1 68 aa3.33□□□□□ -1.88
FN1-220ENST00000480024 MT1FP04733 61 aa3.33□□□□□ -1.88
FN1-220ENST00000480024 HRES1P13985 223 aa3.33□□□□□ -1.88
FN1-220ENST00000480024 MPLKIPQ8TAP9 179 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms