RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 LIMD2Q9BT23 127 aa3.97□□□□□ -1.77
SH3D19-207ENST00000478503 LINC00575Q6W349 94 aa3.96□□□□□ -1.78
SH3D19-207ENST00000478503 Q6ZQT0 140 aa3.96□□□□□ -1.78
SH3D19-207ENST00000478503 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
SH3D19-207ENST00000478503 IGLV8-61A0A075B6I0 122 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 HAMPP81172 84 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 PRR4Q16378 134 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
SH3D19-207ENST00000478503 KRTAP21-3Q3LHN1 58 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 SPAG11AQ6PDA7 123 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 KRTAP26-1Q6PEX3 210 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 DNAH10Q8IVF4 4471 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
SH3D19-207ENST00000478503 ROMO1P60602 79 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 COX7BP24311 80 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 MOBPQ13875 183 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.93□□□□□ -1.78
SH3D19-207ENST00000478503 Q8NBF4 154 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 TGP01266 2768 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 CSAG1Q6PB30 78 aa3.93□□□□□ -1.78
SH3D19-207ENST00000478503 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 TRAV10A0A0B4J240 114 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 K7EIL1 84 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 EGFEM1PQ0D2K5 195 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 JMJD7-PLA2G4BH0Y9G9 81 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
SH3D19-207ENST00000478503 Q5VV11 94 aa3.92□□□□□ -1.78
SH3D19-207ENST00000478503 Q8N9L7 120 aa3.91□□□□□ -1.78
SH3D19-207ENST00000478503 A0A0G2JQZ4 141 aa3.91□□□□□ -1.78
SH3D19-207ENST00000478503 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
SH3D19-207ENST00000478503 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
SH3D19-207ENST00000478503 HUWE1Q7Z6Z7 4374 aaKnown RBP3.9□□□□□ -1.78
SH3D19-207ENST00000478503 C7orf33Q8WU49 177 aa3.9□□□□□ -1.78
SH3D19-207ENST00000478503 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
SH3D19-207ENST00000478503 BPY2O14599 106 aa3.9□□□□□ -1.79
SH3D19-207ENST00000478503 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
SH3D19-207ENST00000478503 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
SH3D19-207ENST00000478503 GVQW2A0A096LPI5 108 aaPredicted RBP3.9□□□□□ -1.79
SH3D19-207ENST00000478503 ST20-AS1Q8NBB2 130 aa3.89□□□□□ -1.79
SH3D19-207ENST00000478503 A0A1B0GW54 56 aa3.89□□□□□ -1.79
SH3D19-207ENST00000478503 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
SH3D19-207ENST00000478503 MUC7Q8TAX7 377 aa3.89□□□□□ -1.79
SH3D19-207ENST00000478503 H3BNG1 76 aa3.88□□□□□ -1.79
SH3D19-207ENST00000478503 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
SH3D19-207ENST00000478503 PSCAO43653 123 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 DNAH10OSP0CZ25 163 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 NREPQ16612 68 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 UBE2DNLQ8IWF7 75 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 BCE1O60756 84 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
SH3D19-207ENST00000478503 TLX1NBP0CAT3 122 aa3.86□□□□□ -1.79
SH3D19-207ENST00000478503 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
SH3D19-207ENST00000478503 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
SH3D19-207ENST00000478503 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
SH3D19-207ENST00000478503 PRLHP81277 87 aa3.86□□□□□ -1.79
SH3D19-207ENST00000478503 DNAH9Q9NYC9 4486 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 SMIM29Q86T20 159 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 Q9BRP9 147 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 A0A096LNI7 61 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 Q8N377 158 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 HIGD2AQ9BW72 106 aa3.85□□□□□ -1.79
SH3D19-207ENST00000478503 MEGF8Q7Z7M0 2845 aa3.84□□□□□ -1.79
SH3D19-207ENST00000478503 DNAH3Q8TD57 4116 aa3.84□□□□□ -1.79
SH3D19-207ENST00000478503 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
SH3D19-207ENST00000478503 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
SH3D19-207ENST00000478503 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
SH3D19-207ENST00000478503 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
SH3D19-207ENST00000478503 H3BPC8 53 aa3.83□□□□□ -1.8
SH3D19-207ENST00000478503 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
SH3D19-207ENST00000478503 PLECQ15149 4684 aaKnown RBP3.83□□□□□ -1.8
SH3D19-207ENST00000478503 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
SH3D19-207ENST00000478503 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
SH3D19-207ENST00000478503 Q6ZRX8 168 aa3.82□□□□□ -1.8
SH3D19-207ENST00000478503 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
SH3D19-207ENST00000478503 DNHD1Q96M86 4753 aa3.81□□□□□ -1.8
SH3D19-207ENST00000478503 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
SH3D19-207ENST00000478503 WWC2-AS2Q96NR7 200 aa3.81□□□□□ -1.8
SH3D19-207ENST00000478503 C1orf137Q5JT78 98 aa3.8□□□□□ -1.8
SH3D19-207ENST00000478503 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
SH3D19-207ENST00000478503 A0A1W2PNM2 257 aa3.8□□□□□ -1.8
SH3D19-207ENST00000478503 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
SH3D19-207ENST00000478503 PANO1I0J062 215 aa3.79□□□□□ -1.8
SH3D19-207ENST00000478503 H3BQ85 93 aa3.79□□□□□ -1.8
SH3D19-207ENST00000478503 PDE6GP18545 87 aa3.79□□□□□ -1.8
SH3D19-207ENST00000478503 LINC00208Q96KT6 92 aa3.79□□□□□ -1.8
SH3D19-207ENST00000478503 KRTAP4-16G5E9R7 235 aaPredicted RBP3.78□□□□□ -1.8
SH3D19-207ENST00000478503 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
SH3D19-207ENST00000478503 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
SH3D19-207ENST00000478503 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
SH3D19-207ENST00000478503 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms