RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 F8W1H4 67 aa5.28□□□□□ -1.56
CCM2-210ENST00000478169 H3BUT2 72 aa5.28□□□□□ -1.56
CCM2-210ENST00000478169 SCGB1D4Q6XE38 83 aa5.28□□□□□ -1.56
CCM2-210ENST00000478169 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
CCM2-210ENST00000478169 IGLV8-61A0A075B6I0 122 aa5.27□□□□□ -1.57
CCM2-210ENST00000478169 OCIAD2Q56VL3 154 aa5.27□□□□□ -1.57
CCM2-210ENST00000478169 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
CCM2-210ENST00000478169 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
CCM2-210ENST00000478169 VPS25Q9BRG1 176 aa5.27□□□□□ -1.57
CCM2-210ENST00000478169 PCOTHQ58A44 107 aa5.26□□□□□ -1.57
CCM2-210ENST00000478169 PCP2Q8IVA1 136 aa5.26□□□□□ -1.57
CCM2-210ENST00000478169 ZNF815PA8K554 130 aa5.25□□□□□ -1.57
CCM2-210ENST00000478169 LGALS3P17931 250 aaKnown RBP5.25□□□□□ -1.57
CCM2-210ENST00000478169 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
CCM2-210ENST00000478169 LIMD2Q9BT23 127 aa5.25□□□□□ -1.57
CCM2-210ENST00000478169 SPANXB1Q9NS25 103 aaPredicted RBP5.25□□□□□ -1.57
CCM2-210ENST00000478169 TRBV20-1A0A075B6N2 111 aa5.24□□□□□ -1.57
CCM2-210ENST00000478169 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
CCM2-210ENST00000478169 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
CCM2-210ENST00000478169 Q6ZVH6 145 aa5.24□□□□□ -1.57
CCM2-210ENST00000478169 RAB37Q96AX2 223 aa5.24□□□□□ -1.57
CCM2-210ENST00000478169 NHP2Q9NX24 153 aaKnown RBP5.24□□□□□ -1.57
CCM2-210ENST00000478169 NDUFC2O95298 119 aa5.23□□□□□ -1.57
CCM2-210ENST00000478169 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
CCM2-210ENST00000478169 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
CCM2-210ENST00000478169 LEPROTO15243 131 aa5.22□□□□□ -1.57
CCM2-210ENST00000478169 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
CCM2-210ENST00000478169 PCP4P48539 62 aa5.22□□□□□ -1.57
CCM2-210ENST00000478169 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
CCM2-210ENST00000478169 ST20-AS1Q8NBB2 130 aa5.21□□□□□ -1.58
CCM2-210ENST00000478169 J3QQQ9 107 aa5.2□□□□□ -1.58
CCM2-210ENST00000478169 M0R2T5 61 aa5.2□□□□□ -1.58
CCM2-210ENST00000478169 SPRR1BP22528 89 aa5.2□□□□□ -1.58
CCM2-210ENST00000478169 FXYD2P54710 66 aa5.2□□□□□ -1.58
CCM2-210ENST00000478169 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
CCM2-210ENST00000478169 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
CCM2-210ENST00000478169 COX6CP09669 75 aa5.19□□□□□ -1.58
CCM2-210ENST00000478169 SCGB1A1P11684 91 aa5.19□□□□□ -1.58
CCM2-210ENST00000478169 HRCT1Q6UXD1 115 aa5.19□□□□□ -1.58
CCM2-210ENST00000478169 SCGB1C2P0DMR2 95 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 IFITM1P13164 125 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 CD164Q04900 197 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 LAMTOR3Q9UHA4 124 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
CCM2-210ENST00000478169 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
CCM2-210ENST00000478169 DHRS4-AS1Q9P1J3 65 aa5.17□□□□□ -1.58
CCM2-210ENST00000478169 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 H3BMG7 143 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 TIMM17BO60830 172 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 PSMB2P49721 201 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 Q5XG85 94 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
CCM2-210ENST00000478169 SIGMAR1Q99720 223 aa5.15□□□□□ -1.59
CCM2-210ENST00000478169 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
CCM2-210ENST00000478169 K7ERJ3 54 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 NPC2P61916 151 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
CCM2-210ENST00000478169 ATXN8Q156A1 80 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 Q1RN00 199 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 SPANXCQ9NY87 97 aa5.14□□□□□ -1.59
CCM2-210ENST00000478169 CFC1P0CG37 223 aa5.13□□□□□ -1.59
CCM2-210ENST00000478169 PPDPFLQ8WWR9 84 aa5.13□□□□□ -1.59
CCM2-210ENST00000478169 H7C2G1 150 aa5.12□□□□□ -1.59
CCM2-210ENST00000478169 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
CCM2-210ENST00000478169 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
CCM2-210ENST00000478169 NAA38Q9BRA0 125 aaKnown RBP5.12□□□□□ -1.59
CCM2-210ENST00000478169 TEX49A0A1B0GTD5 131 aa5.11□□□□□ -1.59
CCM2-210ENST00000478169 TEN1Q86WV5 123 aa5.11□□□□□ -1.59
CCM2-210ENST00000478169 USH2AO75445 5202 aa5.1□□□□□ -1.59
CCM2-210ENST00000478169 A4D1N5 150 aa5.1□□□□□ -1.59
CCM2-210ENST00000478169 COX7BP24311 80 aa5.1□□□□□ -1.59
CCM2-210ENST00000478169 ELOF1P60002 83 aaKnown RBP5.1□□□□□ -1.59
CCM2-210ENST00000478169 ETDBQ3ZM63 59 aa5.1□□□□□ -1.59
CCM2-210ENST00000478169 LINC00308Q8TCZ7 52 aa5.1□□□□□ -1.59
CCM2-210ENST00000478169 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
CCM2-210ENST00000478169 A0A1B0GV72 72 aa5.09□□□□□ -1.59
CCM2-210ENST00000478169 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
CCM2-210ENST00000478169 DEFB105AQ8NG35 78 aa5.09□□□□□ -1.59
CCM2-210ENST00000478169 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
CCM2-210ENST00000478169 H3BT86 120 aa5.08□□□□□ -1.6
CCM2-210ENST00000478169 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
CCM2-210ENST00000478169 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
CCM2-210ENST00000478169 LITAFQ99732 161 aa5.08□□□□□ -1.6
CCM2-210ENST00000478169 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
CCM2-210ENST00000478169 H3BS24 57 aa5.07□□□□□ -1.6
CCM2-210ENST00000478169 SNCGO76070 127 aa5.07□□□□□ -1.6
CCM2-210ENST00000478169 PRO0461Q9UI25 63 aa5.07□□□□□ -1.6
CCM2-210ENST00000478169 IGLV5-48A0A075B6I7 105 aa5.06□□□□□ -1.6
CCM2-210ENST00000478169 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
CCM2-210ENST00000478169 TCL1BO95988 128 aa5.06□□□□□ -1.6
CCM2-210ENST00000478169 ANKRD29Q8N6D5 301 aa5.06□□□□□ -1.6
CCM2-210ENST00000478169 C9JAW5 83 aa5.05□□□□□ -1.6
CCM2-210ENST00000478169 ACYP1P07311 99 aa5.05□□□□□ -1.6
CCM2-210ENST00000478169 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms