RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CEND1Q8N111 149 aa12.66□□□□□ -0.38
TRAF4-211ENST00000478021 MUC17Q685J3 4493 aa12.64□□□□□ -0.39
TRAF4-211ENST00000478021 F8WEM9 126 aa12.64□□□□□ -0.39
TRAF4-211ENST00000478021 FXYD2P54710 66 aa12.62□□□□□ -0.39
TRAF4-211ENST00000478021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-211ENST00000478021 TMEM238LA0A1B0GVL6 79 aa12.59□□□□□ -0.39
TRAF4-211ENST00000478021 A6NJY4 79 aa12.59□□□□□ -0.39
TRAF4-211ENST00000478021 FAM218AQ96MZ4 157 aa12.56□□□□□ -0.4
TRAF4-211ENST00000478021 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
TRAF4-211ENST00000478021 H0YGX0 51 aa12.54□□□□□ -0.4
TRAF4-211ENST00000478021 Q5XG85 94 aa12.54□□□□□ -0.4
TRAF4-211ENST00000478021 HSD52Q0P140 79 aa12.53□□□□□ -0.4
TRAF4-211ENST00000478021 XP32Q5T750 250 aa12.53□□□□□ -0.4
TRAF4-211ENST00000478021 IGLV8-61A0A075B6I0 122 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 A0A0U1RQV1 116 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 ASB16-AS1Q495Z4 193 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 OCIAD2Q56VL3 154 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 IGFL1Q6UW32 110 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 SNHG12Q9BXW3 62 aa12.52□□□□□ -0.41
TRAF4-211ENST00000478021 C9orf92A6NGG3 77 aa12.51□□□□□ -0.41
TRAF4-211ENST00000478021 C1orf195Q5TG92 126 aa12.51□□□□□ -0.41
TRAF4-211ENST00000478021 Q6JHZ5 121 aa12.51□□□□□ -0.41
TRAF4-211ENST00000478021 CLEC2BQ92478 149 aa12.5□□□□□ -0.41
TRAF4-211ENST00000478021 SNCGO76070 127 aa12.49□□□□□ -0.41
TRAF4-211ENST00000478021 H3BUT2 72 aa12.48□□□□□ -0.41
TRAF4-211ENST00000478021 K7ERJ3 54 aa12.48□□□□□ -0.41
TRAF4-211ENST00000478021 SEC61BP60468 96 aaKnown RBP12.48□□□□□ -0.41
TRAF4-211ENST00000478021 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
TRAF4-211ENST00000478021 TRIAP1O43715 76 aa12.47□□□□□ -0.41
TRAF4-211ENST00000478021 TCL1BO95988 128 aa12.46□□□□□ -0.41
TRAF4-211ENST00000478021 TRBV7-7A0A0K0K1E9 115 aa12.44□□□□□ -0.42
TRAF4-211ENST00000478021 FAT4Q6V0I7 4981 aa12.42□□□□□ -0.42
TRAF4-211ENST00000478021 KRTAP4-1Q9BYQ7 146 aa12.42□□□□□ -0.42
TRAF4-211ENST00000478021 A0A1B0GX51 115 aa12.41□□□□□ -0.42
TRAF4-211ENST00000478021 PSMB2P49721 201 aa12.4□□□□□ -0.42
TRAF4-211ENST00000478021 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
TRAF4-211ENST00000478021 FABP2P12104 132 aa12.38□□□□□ -0.43
TRAF4-211ENST00000478021 H3BMG7 143 aa12.32□□□□□ -0.44
TRAF4-211ENST00000478021 DNAL4O96015 105 aa12.32□□□□□ -0.44
TRAF4-211ENST00000478021 GHRHP01286 108 aa12.32□□□□□ -0.44
TRAF4-211ENST00000478021 COX6CP09669 75 aa12.31□□□□□ -0.44
TRAF4-211ENST00000478021 PCOTHQ58A44 107 aa12.31□□□□□ -0.44
TRAF4-211ENST00000478021 ORMDL1Q9P0S3 153 aa12.29□□□□□ -0.44
TRAF4-211ENST00000478021 LCE2AQ5TA79 106 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-211ENST00000478021 Q6Q795 121 aa12.28□□□□□ -0.44
TRAF4-211ENST00000478021 A0A1B0GV72 72 aa12.27□□□□□ -0.45
TRAF4-211ENST00000478021 TEN1Q86WV5 123 aa12.27□□□□□ -0.45
TRAF4-211ENST00000478021 LST1O00453 97 aa12.26□□□□□ -0.45
TRAF4-211ENST00000478021 KRTAP9-2Q9BYQ4 174 aa12.26□□□□□ -0.45
TRAF4-211ENST00000478021 A0A087WSZ3 146 aa12.23□□□□□ -0.45
TRAF4-211ENST00000478021 SS18L2Q9UHA2 77 aa12.23□□□□□ -0.45
TRAF4-211ENST00000478021 SCGB1C2P0DMR2 95 aa12.22□□□□□ -0.45
TRAF4-211ENST00000478021 SMIM6P0DI80 62 aa12.21□□□□□ -0.45
TRAF4-211ENST00000478021 RPL37P61927 97 aaKnown RBP12.21□□□□□ -0.45
TRAF4-211ENST00000478021 A0A1W2PNM2 257 aa12.2□□□□□ -0.46
TRAF4-211ENST00000478021 H3BQ85 93 aa12.19□□□□□ -0.46
TRAF4-211ENST00000478021 TMEM256-PLSCR3K7ERE1 68 aa12.19□□□□□ -0.46
TRAF4-211ENST00000478021 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
TRAF4-211ENST00000478021 OBSCN-AS1Q96MR7 158 aa12.17□□□□□ -0.46
TRAF4-211ENST00000478021 M0R143 59 aa12.16□□□□□ -0.46
TRAF4-211ENST00000478021 TRACP01848 142 aa12.16□□□□□ -0.46
TRAF4-211ENST00000478021 NAA38Q9BRA0 125 aaKnown RBP12.14□□□□□ -0.47
TRAF4-211ENST00000478021 Q96NJ1 140 aa12.13□□□□□ -0.47
TRAF4-211ENST00000478021 UBE2V1Q13404 147 aa12.12□□□□□ -0.47
TRAF4-211ENST00000478021 TRBV7-4A0A0J9YYF1 115 aa12.09□□□□□ -0.47
TRAF4-211ENST00000478021 CCKP06307 115 aa12.07□□□□□ -0.48
TRAF4-211ENST00000478021 LOC105371267A0A1B0GV96 52 aa12.05□□□□□ -0.48
TRAF4-211ENST00000478021 TSTD3H0UI37 97 aa12.05□□□□□ -0.48
TRAF4-211ENST00000478021 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
TRAF4-211ENST00000478021 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
TRAF4-211ENST00000478021 KRTAP19-2Q3LHN2 52 aa12.04□□□□□ -0.48
TRAF4-211ENST00000478021 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
TRAF4-211ENST00000478021 Q75L30 129 aa12.03□□□□□ -0.48
TRAF4-211ENST00000478021 VPS25Q9BRG1 176 aa12.03□□□□□ -0.48
TRAF4-211ENST00000478021 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
TRAF4-211ENST00000478021 BATFQ16520 125 aa12.02□□□□□ -0.49
TRAF4-211ENST00000478021 ATXN8Q156A1 80 aa12.01□□□□□ -0.49
TRAF4-211ENST00000478021 IGKV4-1P06312 121 aa12□□□□□ -0.49
TRAF4-211ENST00000478021 DSCR10P59022 87 aa12□□□□□ -0.49
TRAF4-211ENST00000478021 DEFB116Q30KQ4 102 aa11.99□□□□□ -0.49
TRAF4-211ENST00000478021 DSCR8Q96T75 97 aa11.99□□□□□ -0.49
TRAF4-211ENST00000478021 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
TRAF4-211ENST00000478021 C20orf166-AS1Q96NR2 134 aa11.94□□□□□ -0.5
TRAF4-211ENST00000478021 LINC00472Q9H8W2 130 aa11.94□□□□□ -0.5
TRAF4-211ENST00000478021 KRTAP9-6A0A140TA67 174 aa11.93□□□□□ -0.5
TRAF4-211ENST00000478021 C9JAW5 83 aa11.92□□□□□ -0.5
TRAF4-211ENST00000478021 A8MUU9 505 aa11.91□□□□□ -0.5
TRAF4-211ENST00000478021 LINC00313P59037 77 aa11.89□□□□□ -0.51
TRAF4-211ENST00000478021 MT1HP80294 61 aa11.89□□□□□ -0.51
TRAF4-211ENST00000478021 LYRM7Q5U5X0 104 aa11.89□□□□□ -0.51
TRAF4-211ENST00000478021 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
TRAF4-211ENST00000478021 IGHV6-1A0A0B4J1U7 121 aa11.85□□□□□ -0.51
TRAF4-211ENST00000478021 JMJD7-PLA2G4BH0Y9G9 81 aa11.85□□□□□ -0.51
TRAF4-211ENST00000478021 COX6B2Q6YFQ2 88 aa11.85□□□□□ -0.51
TRAF4-211ENST00000478021 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
TRAF4-211ENST00000478021 KRTAP16-1A8MUX0 517 aa11.84□□□□□ -0.51
TRAF4-211ENST00000478021 Q6ZQT0 140 aa11.84□□□□□ -0.51
TRAF4-211ENST00000478021 C9orf118A6NHY6 69 aa11.81□□□□□ -0.52
TRAF4-211ENST00000478021 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms