RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SND1-IT1Q9HBX3 110 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 MT-ND4LP03901 98 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 JOSD1Q15040 202 aaPredicted RBP2.49□□□□□ -2.01
CKS1B-207ENST00000477676 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 Q6Q795 121 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 ATP5L2Q7Z4Y8 100 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 TOMM6Q96B49 74 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 TIMM17AQ99595 171 aa2.49□□□□□ -2.01
CKS1B-207ENST00000477676 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
CKS1B-207ENST00000477676 PSPHP1O15172 72 aa2.48□□□□□ -2.01
CKS1B-207ENST00000477676 NDUFS5O43920 106 aa2.48□□□□□ -2.01
CKS1B-207ENST00000477676 ORMDL2Q53FV1 153 aa2.48□□□□□ -2.01
CKS1B-207ENST00000477676 COA6Q5JTJ3 125 aaKnown RBP2.48□□□□□ -2.01
CKS1B-207ENST00000477676 GNB1LQ9BYB4 327 aa2.48□□□□□ -2.01
CKS1B-207ENST00000477676 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
CKS1B-207ENST00000477676 ERC2-IT1O76042 136 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 SPINK1P00995 79 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 SEC11AP67812 179 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 PEA15Q15121 130 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 PCOTHQ58A44 107 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 SMCR5Q8TEV8 140 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 RAB37Q96AX2 223 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 ZNF625Q96I27 306 aaPredicted RBP2.47□□□□□ -2.01
CKS1B-207ENST00000477676 SCGB3A1Q96QR1 104 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 MIEN1Q9BRT3 115 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 SMCO4Q9NRQ5 59 aa2.47□□□□□ -2.01
CKS1B-207ENST00000477676 A0A096LNJ9 63 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 LINC01546A6NGU7 62 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 K7EMI3 77 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
CKS1B-207ENST00000477676 SPRR1AP35321 89 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 TMEM258P61165 79 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 PRR15Q8IV56 129 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 YPEL4Q96NS1 127 aa2.46□□□□□ -2.02
CKS1B-207ENST00000477676 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
CKS1B-207ENST00000477676 TRBV7-6A0A0J9YX20 115 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 C8orf87E5RJ46 101 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 J3QQQ9 107 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 APOC3P02656 99 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 IGLC3P0DOY3 106 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 MOBPQ13875 183 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 MEIG1Q5JSS6 88 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 ATOH7Q8N100 152 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 Q9BRP9 147 aa2.45□□□□□ -2.02
CKS1B-207ENST00000477676 TRAV9-1A0A075B6T8 112 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 SCGB1C2P0DMR2 95 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 IFITM1P13164 125 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 RPS29P62273 56 aaKnown RBP2.44□□□□□ -2.02
CKS1B-207ENST00000477676 COX17Q14061 63 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 VAMP8Q9BV40 100 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 SEC11CQ9BY50 192 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 KCNQ1DNQ9H478 68 aa2.44□□□□□ -2.02
CKS1B-207ENST00000477676 TRBV10-3A0A0K0K1G6 114 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 A0A1B0GW54 56 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 NCR3O14931 201 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 SLC25A20O43772 301 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 TRGC2P03986 189 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 MP68P56378 58 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 LINC01545Q5VT33 79 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 HRCT1Q6UXD1 115 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 PRO1933Q9H354 126 aa2.43□□□□□ -2.02
CKS1B-207ENST00000477676 ZNF706Q9Y5V0 76 aaPredicted RBP2.43□□□□□ -2.02
CKS1B-207ENST00000477676 A0A0J9YXY3 114 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 H3BRM9 83 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 UQCRQO14949 82 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 SMIM13P0DJ93 91 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 Q5XG85 94 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 SSBP3-AS1Q7Z2R9 100 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 CAMK2N1Q7Z7J9 78 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 RBM12B-AS1Q9P1G2 102 aa2.42□□□□□ -2.02
CKS1B-207ENST00000477676 ETDCA0A1B0GVM5 59 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 COLCA2A8K830 154 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 FABP4P15090 132 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 LGALS3P17931 250 aaKnown RBP2.41□□□□□ -2.02
CKS1B-207ENST00000477676 LINC00158P58513 81 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 HERVK_113P61574 105 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 FAM19A2Q8N3H0 131 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 MIR7-3HGQ8N6C7 128 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 UQCR10Q9UDW1 63 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 NDUFA12Q9UI09 145 aa2.41□□□□□ -2.02
CKS1B-207ENST00000477676 IGHV6-1A0A0B4J1U7 121 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 TMEM223A0PJW6 202 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 F8W1H4 67 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 M0R2T5 61 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 C6orf99Q4VX62 202 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 Q6ZRX8 168 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
CKS1B-207ENST00000477676 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
CKS1B-207ENST00000477676 LINC01549A6NIU2 74 aa2.39□□□□□ -2.03
CKS1B-207ENST00000477676 TSPEAR-AS2P59090 65 aa2.39□□□□□ -2.03
CKS1B-207ENST00000477676 TMEM170BQ5T4T1 132 aa2.39□□□□□ -2.03
CKS1B-207ENST00000477676 BAGE3Q86Y29 109 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms